Male CNS – Cell Type Explorer

vMS12_e[T2]{12A}

AKA: vMs-m (Cachero 2010)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
3,156
Total Synapses
Right: 1,548 | Left: 1,608
log ratio : 0.05
1,578
Mean Synapses
Right: 1,548 | Left: 1,608
log ratio : 0.05
ACh(96.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)2,09388.7%-2.0351364.4%
IntTct1416.0%0.1715919.9%
LTct1114.7%0.1712515.7%
Ov80.3%-inf00.0%
VNC-unspecified60.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
vMS12_e
%
In
CV
IN11A0012GABA141.512.4%0.0
AN02A0012Glu84.57.4%0.0
dPR12ACh78.56.9%0.0
dMS92ACh75.56.6%0.0
IN06B0437GABA756.6%0.8
IN06B0365GABA746.5%0.4
vMS12_b2ACh615.4%0.0
vMS12_a6ACh54.54.8%0.5
IN08B0352ACh54.54.8%0.0
IN11B024_b4GABA45.54.0%0.2
IN06B0132GABA36.53.2%0.0
IN00A056 (M)7GABA32.52.9%0.4
vMS12_c4ACh30.52.7%0.6
IN11B024_c4GABA302.6%0.2
IN06A0032GABA27.52.4%0.0
IN19B0082ACh20.51.8%0.0
vPR9_a (M)4GABA19.51.7%0.4
IN19B0472ACh19.51.7%0.0
IN08B051_c3ACh171.5%0.1
IN11B024_a2GABA11.51.0%0.0
IN08B0032GABA111.0%0.0
IN12A0448ACh100.9%0.8
vMS1111Glu9.50.8%0.6
IN11B0042GABA70.6%0.0
IN06B0476GABA70.6%0.4
IN17A0302ACh5.50.5%0.0
TN1a_f4ACh4.50.4%0.2
IN10B0061ACh40.4%0.0
IN08B051_d4ACh40.4%0.2
IN08B051_e2ACh3.50.3%0.0
dMS25ACh3.50.3%0.2
IN08B051_a3ACh30.3%0.4
IN11B0143GABA30.3%0.0
IN11B0254GABA30.3%0.3
IN00A010 (M)1GABA2.50.2%0.0
IN19A0321ACh2.50.2%0.0
IN00A022 (M)1GABA2.50.2%0.0
vPR9_c (M)2GABA2.50.2%0.6
IN03B0242GABA2.50.2%0.0
IN17A0351ACh20.2%0.0
IN17A0322ACh20.2%0.0
IN17A0292ACh20.2%0.0
IN06B0612GABA20.2%0.0
IN03B0584GABA20.2%0.0
AN08B0613ACh20.2%0.0
IN19B0901ACh1.50.1%0.0
AN02A0021Glu1.50.1%0.0
INXXX3551GABA1.50.1%0.0
IN05B0311GABA1.50.1%0.0
IN03B0532GABA1.50.1%0.3
IN08B0682ACh1.50.1%0.3
vMS12_d3ACh1.50.1%0.0
IN13B1042GABA1.50.1%0.0
vMS162unc1.50.1%0.0
IN17A1031ACh10.1%0.0
IN00A044 (M)1GABA10.1%0.0
IN06B0831GABA10.1%0.0
IN03B0571GABA10.1%0.0
IN19B0821ACh10.1%0.0
IN08B051_b1ACh10.1%0.0
IN05B0371GABA10.1%0.0
IN08B083_d2ACh10.1%0.0
hg3 MN1GABA10.1%0.0
IN00A054 (M)2GABA10.1%0.0
IN11A0042ACh10.1%0.0
IN08B083_a2ACh10.1%0.0
IN08B0062ACh10.1%0.0
AN08B0472ACh10.1%0.0
IN17A1071ACh0.50.0%0.0
dMS51ACh0.50.0%0.0
IN00A039 (M)1GABA0.50.0%0.0
IN17A1081ACh0.50.0%0.0
IN17A082, IN17A0861ACh0.50.0%0.0
IN00A057 (M)1GABA0.50.0%0.0
TN1a_d1ACh0.50.0%0.0
IN07B0311Glu0.50.0%0.0
AN08B0351ACh0.50.0%0.0
IN19B0771ACh0.50.0%0.0
IN17A0951ACh0.50.0%0.0
vPR9_b (M)1GABA0.50.0%0.0
IN12A059_c1ACh0.50.0%0.0
IN17A1011ACh0.50.0%0.0
IN08B1051ACh0.50.0%0.0
IN17A1041ACh0.50.0%0.0
IN12A0551ACh0.50.0%0.0
IN12A052_a1ACh0.50.0%0.0
IN19B0701ACh0.50.0%0.0
IN16B068_b1Glu0.50.0%0.0
IN16B068_c1Glu0.50.0%0.0
IN18B0491ACh0.50.0%0.0
TN1a_c1ACh0.50.0%0.0
IN17A0991ACh0.50.0%0.0
IN00A043 (M)1GABA0.50.0%0.0
IN08B085_a1ACh0.50.0%0.0
IN17A0331ACh0.50.0%0.0
IN11B0131GABA0.50.0%0.0
TN1a_e1ACh0.50.0%0.0
IN18B0351ACh0.50.0%0.0
TN1a_b1ACh0.50.0%0.0
IN14B0011GABA0.50.0%0.0
IN19B0071ACh0.50.0%0.0
INXXX0381ACh0.50.0%0.0
AN08B1021ACh0.50.0%0.0

Outputs

downstream
partner
#NTconns
vMS12_e
%
Out
CV
dMS217ACh354.528.8%1.1
IN06B0437GABA15712.7%0.3
IN06B0616GABA81.56.6%0.6
IN08B051_d4ACh75.56.1%0.2
IN06B0132GABA68.55.6%0.0
i1 MN2ACh66.55.4%0.0
IN06B0365GABA574.6%0.8
IN08B051_c3ACh504.1%0.3
IN08B051_e2ACh31.52.6%0.0
IN06B0178GABA19.51.6%0.7
IN06B0478GABA171.4%0.8
AN17B0134GABA16.51.3%0.3
AN06B0462GABA15.51.3%0.0
IN12A0448ACh15.51.3%0.8
MNwm352unc13.51.1%0.0
IN03B0242GABA9.50.8%0.0
IN12B0151GABA90.7%0.0
IN00A056 (M)5GABA8.50.7%0.6
IN11B024_b4GABA8.50.7%0.1
vMS117Glu8.50.7%0.3
IN11B0042GABA70.6%0.0
IN11B024_c4GABA70.6%0.6
IN06B0666GABA6.50.5%0.4
dMS52ACh60.5%0.0
IN11B022_c2GABA50.4%0.0
IN11B024_a2GABA50.4%0.0
DVMn 1a-c3unc50.4%0.1
iii1 MN1unc4.50.4%0.0
IN11B0141GABA40.3%0.0
IN08B051_a2ACh40.3%0.0
vMS12_c3ACh40.3%0.4
IN12A052_a2ACh40.3%0.0
IN06A0032GABA40.3%0.0
IN11B0255GABA3.50.3%0.2
vMS12_d3ACh3.50.3%0.0
vMS12_a5ACh3.50.3%0.3
MNad261unc30.2%0.0
i2 MN2ACh30.2%0.0
AN02A0012Glu30.2%0.0
AN08B0744ACh2.50.2%0.3
hg3 MN1GABA20.2%0.0
DVMn 3a, b2unc20.2%0.5
AN08B099_d1ACh20.2%0.0
IN19B0471ACh20.2%0.0
IN11A0011GABA20.2%0.0
vPR9_c (M)3GABA20.2%0.4
IN08B0872ACh20.2%0.0
IN12A052_b3ACh20.2%0.2
AN08B0972ACh20.2%0.0
IN17A0482ACh20.2%0.0
AN08B1032ACh20.2%0.0
IN16B0691Glu1.50.1%0.0
IN02A0081Glu1.50.1%0.0
vPR9_a (M)2GABA1.50.1%0.3
IN17A0391ACh1.50.1%0.0
vMS12_b1ACh1.50.1%0.0
IN06B0532GABA1.50.1%0.0
IN19B0901ACh10.1%0.0
IN00A044 (M)1GABA10.1%0.0
IN03B0531GABA10.1%0.0
IN07B0811ACh10.1%0.0
tp1 MN1unc10.1%0.0
IN03B0641GABA10.1%0.0
IN03B0771GABA10.1%0.0
IN17A1141ACh10.1%0.0
EN00B015 (M)1unc10.1%0.0
IN12A0421ACh10.1%0.0
IN08B0681ACh10.1%0.0
IN17B0041GABA10.1%0.0
IN08B0061ACh10.1%0.0
IN00A022 (M)2GABA10.1%0.0
IN06B0772GABA10.1%0.0
AN08B0472ACh10.1%0.0
TN1a_f2ACh10.1%0.0
IN06B0192GABA10.1%0.0
IN08B083_d1ACh0.50.0%0.0
IN12A0301ACh0.50.0%0.0
IN06B0811GABA0.50.0%0.0
IN17A1011ACh0.50.0%0.0
IN08B1041ACh0.50.0%0.0
IN00A057 (M)1GABA0.50.0%0.0
IN06B0591GABA0.50.0%0.0
TN1a_e1ACh0.50.0%0.0
IN05B0371GABA0.50.0%0.0
ps1 MN1unc0.50.0%0.0
IN08B085_a1ACh0.50.0%0.0
dPR11ACh0.50.0%0.0
dMS91ACh0.50.0%0.0
AN17B0161GABA0.50.0%0.0
IN11B0131GABA0.50.0%0.0
IN03B0571GABA0.50.0%0.0
IN07B0771ACh0.50.0%0.0
IN03B0651GABA0.50.0%0.0
IN12A059_a1ACh0.50.0%0.0
IN12A0541ACh0.50.0%0.0
IN08A0111Glu0.50.0%0.0
TN1a_a1ACh0.50.0%0.0
TN1a_d1ACh0.50.0%0.0
IN17A0301ACh0.50.0%0.0
AN08B0611ACh0.50.0%0.0