Male CNS – Cell Type Explorer

vLN27(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,582
Total Synapses
Post: 1,159 | Pre: 423
log ratio : -1.45
1,582
Mean Synapses
Post: 1,159 | Pre: 423
log ratio : -1.45
unc(43.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(R)1,15699.7%-1.4542299.8%
CentralBrain-unspecified30.3%-1.5810.2%

Connectivity

Inputs

upstream
partner
#NTconns
vLN27
%
In
CV
ORN_VM6v34ACh49153.3%0.9
v2LN5 (R)1ACh646.9%0.0
ORN_DL2v13ACh485.2%0.8
v2LN5 (L)2ACh444.8%0.1
ORN_DP1m13ACh272.9%0.4
vLN29 (R)1unc252.7%0.0
ALIN5 (L)1GABA242.6%0.0
vLN28 (R)1Glu232.5%0.0
M_l2PNl20 (R)1ACh202.2%0.0
il3LN6 (L)1GABA151.6%0.0
ORN_VM6m8ACh151.6%0.7
ORN_DP1l7ACh141.5%0.8
lLN2R_a (R)3GABA121.3%0.4
v2LN33 (R)1ACh70.8%0.0
lLN2X12 (R)4ACh60.7%0.6
il3LN6 (R)1GABA50.5%0.0
lLN1_bc (R)5ACh50.5%0.0
VM4_lvPN (R)1ACh40.4%0.0
VM1_lPN (R)1ACh40.4%0.0
OA-VUMa2 (M)2OA40.4%0.0
v2LN34E (R)1Glu30.3%0.0
VM6_adPN (R)1ACh30.3%0.0
lLN2X11 (R)1ACh30.3%0.0
M_lPNm11D (R)2ACh30.3%0.3
lLN2X05 (R)2ACh30.3%0.3
ORN_VM6l3ACh30.3%0.0
v2LNX01 (R)1unc20.2%0.0
M_l2PNl21 (R)1ACh20.2%0.0
OA-VUMa5 (M)1OA20.2%0.0
lLN1_a (R)1ACh20.2%0.0
M_spPN4t9 (R)1ACh20.2%0.0
ALIN1 (R)1unc20.2%0.0
M_l2PNl20 (L)1ACh20.2%0.0
DM4_adPN (R)1ACh20.2%0.0
lLN2F_a (R)1unc20.2%0.0
lLN2X04 (R)2ACh20.2%0.0
lLN12A (R)2ACh20.2%0.0
ALBN1 (L)1unc10.1%0.0
VC3_adPN (R)1ACh10.1%0.0
ORN_VM41ACh10.1%0.0
ORN_VC31ACh10.1%0.0
ORN_DM41ACh10.1%0.0
CB3447 (R)1GABA10.1%0.0
M_adPNm8 (R)1ACh10.1%0.0
CB2908 (R)1ACh10.1%0.0
lLN2T_b (R)1ACh10.1%0.0
v2LN38 (L)1ACh10.1%0.0
lLN13 (R)1GABA10.1%0.0
lLN15 (L)1GABA10.1%0.0
lLN2P_b (R)1GABA10.1%0.0
v2LN50 (R)1Glu10.1%0.0
LHAD4a1 (R)1Glu10.1%0.0
VP2+VC5_l2PN (R)1ACh10.1%0.0
VP1d_il2PN (L)1ACh10.1%0.0
VP2+VC5_l2PN (L)1ACh10.1%0.0
VM4_adPN (R)1ACh10.1%0.0
M_vPNml50 (R)1GABA10.1%0.0
PPM1201 (R)1DA10.1%0.0
lLN2T_e (R)1ACh10.1%0.0
VP1d+VP4_l2PN1 (L)1ACh10.1%0.0
lLN2T_c (R)1ACh10.1%0.0
DP1m_adPN (R)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
vLN27
%
Out
CV
VM6_adPN (R)1ACh21519.8%0.0
vLN28 (R)1Glu1059.7%0.0
vLN29 (R)1unc1059.7%0.0
VC5_lvPN (R)3ACh968.8%0.4
vLN25 (R)2Glu807.4%0.4
VM1_lPN (R)1ACh787.2%0.0
M_lPNm11D (R)3ACh444.0%0.3
VC3_adPN (R)3ACh292.7%0.1
M_l2PN3t18 (R)2ACh232.1%0.1
DM4_adPN (R)1ACh201.8%0.0
DM6_adPN (R)4ACh191.7%0.3
VM4_lvPN (R)1ACh151.4%0.0
M_adPNm5 (R)4ACh151.4%0.2
lLN2X04 (R)2ACh141.3%0.1
DL2v_adPN (R)3ACh141.3%0.4
M_spPN4t9 (R)1ACh131.2%0.0
DP1m_adPN (R)1ACh90.8%0.0
lLN2T_a (R)2ACh90.8%0.3
ORN_VM6v8ACh90.8%0.3
v2LN33 (R)1ACh80.7%0.0
M_l2PN10t19 (R)1ACh80.7%0.0
v2LN5 (R)1ACh80.7%0.0
VM4_adPN (R)1ACh70.6%0.0
lLN2R_a (R)3GABA70.6%0.2
lLN2P_b (R)2GABA60.6%0.3
M_adPNm4 (R)1ACh50.5%0.0
M_l2PNl20 (R)1ACh40.4%0.0
DP1l_adPN (R)1ACh40.4%0.0
M_l2PN10t19 (L)2ACh40.4%0.5
lLN2X12 (R)2ACh40.4%0.0
M_adPNm8 (R)1ACh30.3%0.0
M_vPNml86 (R)1GABA30.3%0.0
v2LN37 (R)1Glu30.3%0.0
VP2+VC5_l2PN (L)1ACh30.3%0.0
M_vPNml50 (R)1GABA30.3%0.0
DM3_adPN (R)1ACh30.3%0.0
lLN2T_e (R)1ACh30.3%0.0
VC1_lPN (R)1ACh30.3%0.0
lLN8 (R)1GABA30.3%0.0
ORN_VM6m2ACh30.3%0.3
CB3447 (R)2GABA30.3%0.3
M_adPNm7 (R)2ACh30.3%0.3
M_lPNm11A (R)2ACh30.3%0.3
CB2004 (R)2GABA30.3%0.3
v2LN46 (R)1Glu20.2%0.0
ORN_VM41ACh20.2%0.0
ORN_VC51ACh20.2%0.0
M_lPNm13 (R)1ACh20.2%0.0
M_lPNm11C (R)1ACh20.2%0.0
M_lPNm11B (R)1ACh20.2%0.0
CB3202 (R)1ACh20.2%0.0
M_lvPNm46 (R)1ACh20.2%0.0
M_lvPNm33 (R)1ACh20.2%0.0
VP1d_il2PN (R)1ACh20.2%0.0
v2LN40_2 (R)1unc20.2%0.0
M_lvPNm24 (R)1ACh20.2%0.0
lLN2T_b (R)1ACh20.2%0.0
lLN2X11 (R)1ACh20.2%0.0
lLN2P_a (R)1GABA20.2%0.0
il3LN6 (R)1GABA20.2%0.0
CB4083 (R)2Glu20.2%0.0
ORN_VM12ACh20.2%0.0
ALIN5 (L)1GABA10.1%0.0
DL5_adPN (R)1ACh10.1%0.0
il3LN6 (L)1GABA10.1%0.0
DL2d_adPN (R)1ACh10.1%0.0
DL1_adPN (R)1ACh10.1%0.0
vLN24 (R)1ACh10.1%0.0
ORN_VM6l1ACh10.1%0.0
v2LN3A1_b (R)1ACh10.1%0.0
ORN_VC31ACh10.1%0.0
M_VPNml66 (R)1GABA10.1%0.0
M_lvPNm42 (R)1ACh10.1%0.0
v2LNX01 (R)1unc10.1%0.0
VM6_lvPN (R)1ACh10.1%0.0
v2LN3A1_b (L)1ACh10.1%0.0
lLN13 (R)1GABA10.1%0.0
CB2561 (R)1GABA10.1%0.0
lLN15 (L)1GABA10.1%0.0
M_lvPNm39 (R)1ACh10.1%0.0
l2LN19 (R)1GABA10.1%0.0
ALIN3 (R)1ACh10.1%0.0
VP2+VC5_l2PN (R)1ACh10.1%0.0
CB3417 (R)1unc10.1%0.0
VM7d_adPN (R)1ACh10.1%0.0
VP1d_il2PN (L)1ACh10.1%0.0
M_l2PNm16 (R)1ACh10.1%0.0
M_lvPNm25 (R)1ACh10.1%0.0
LN60 (R)1GABA10.1%0.0
lLN1_a (R)1ACh10.1%0.0
lLN2T_d (R)1unc10.1%0.0
v2LN30 (R)1unc10.1%0.0
ALON3 (R)1Glu10.1%0.0
M_spPN5t10 (R)1ACh10.1%0.0
ALBN1 (R)1unc10.1%0.0