Male CNS – Cell Type Explorer

v2LN4

6
Total Neurons
Right: 3 | Left: 3
log ratio : 0.00
7,785
Total Synapses
Right: 4,259 | Left: 3,526
log ratio : -0.27
1,297.5
Mean Synapses
Right: 1,419.7 | Left: 1,175.3
log ratio : -0.27
ACh(76.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL5,09998.6%-0.982,58198.8%
LAL360.7%-1.36140.5%
CentralBrain-unspecified300.6%-2.9140.2%
SAD50.1%1.38130.5%
VES30.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
v2LN4
%
In
CV
TRN_VP3a6ACh229.529.7%0.1
l2LN223unc100.813.1%0.1
v2LN46ACh89.211.5%0.3
HRN_VP512ACh74.39.6%0.5
lLN2F_b4GABA29.23.8%0.1
vLN254Glu27.83.6%0.3
lLN2F_a4unc192.5%0.3
VP3+_l2PN6ACh17.82.3%0.2
M_l2PNm164ACh172.2%0.1
M_l2PNm152ACh15.72.0%0.0
LHAD4a12Glu13.71.8%0.0
CB10488Glu8.21.1%0.6
HRN_VP1l5ACh7.20.9%0.5
v2LN312unc7.20.9%0.0
M_l2PN10t194ACh7.20.9%0.8
VP5+Z_adPN2ACh5.30.7%0.0
PPM12014DA40.5%0.2
AL-AST13ACh3.50.5%0.1
VP1l+VP3_ilPN2ACh3.50.5%0.0
M_l2PNm172ACh3.20.4%0.0
VP5+VP3_l2PN2ACh30.4%0.0
lLN2P_c6GABA30.4%0.5
TRN_VP24ACh2.80.4%0.8
v2LN383ACh2.70.3%0.1
ALON12ACh2.70.3%0.0
VA5_lPN3ACh2.50.3%0.3
vLN292unc2.50.3%0.0
VP4+VL1_l2PN2ACh2.50.3%0.0
OA-VUMa2 (M)2OA2.30.3%0.3
lLN2R_a4GABA2.30.3%0.1
v2LN39a4Glu2.20.3%0.6
vLN282Glu2.20.3%0.0
HRN_VP1d5ACh1.80.2%0.5
HRN_VP46ACh1.80.2%0.6
TRN_VP3b1ACh1.70.2%0.0
lLN1_bc6ACh1.70.2%0.4
VP1d+VP4_l2PN22ACh1.70.2%0.0
v2LN493Glu1.50.2%0.0
lLN2X114ACh1.50.2%0.4
VP1m+VP2_lvPN25ACh1.50.2%0.5
lLN2P_b4GABA1.30.2%0.6
v2LN322Glu1.30.2%0.0
ALIN22ACh1.30.2%0.0
MZ_lv2PN2GABA1.30.2%0.0
v2LNX012unc1.30.2%0.0
lLN2X124ACh1.20.2%0.5
M_lvPNm472ACh1.20.2%0.0
VP3+VP1l_ivPN2ACh1.20.2%0.0
CB06504Glu1.20.2%0.1
l2LN203GABA1.20.2%0.1
VP2+VC5_l2PN1ACh10.1%0.0
TRN_VP1m3ACh10.1%0.0
ORN_VL15ACh10.1%0.3
lLN2X053ACh10.1%0.4
M_l2PN3t184ACh10.1%0.2
l2LN234GABA10.1%0.3
ORN_VA52ACh0.80.1%0.2
OA-VUMa5 (M)2OA0.80.1%0.6
VP2+Z_lvPN2ACh0.80.1%0.0
M_adPNm32ACh0.80.1%0.0
VP2_l2PN2ACh0.80.1%0.0
VP1d_il2PN2ACh0.80.1%0.0
M_lvPNm483ACh0.80.1%0.0
il3LN61GABA0.70.1%0.0
SMP1421unc0.70.1%0.0
M_lPNm11A2ACh0.70.1%0.5
M_l2PNl202ACh0.70.1%0.0
lLN133GABA0.70.1%0.2
CB34472GABA0.70.1%0.0
lLN2T_b3ACh0.70.1%0.0
M_l2PNl231ACh0.50.1%0.0
v2LN301unc0.50.1%0.0
v2LN411unc0.50.1%0.0
vLN261unc0.50.1%0.0
v2LN332ACh0.50.1%0.3
lLN2T_e1ACh0.50.1%0.0
CB40833Glu0.50.1%0.0
VP2_adPN1ACh0.50.1%0.0
v2LN372Glu0.50.1%0.0
CB15452Glu0.50.1%0.0
VP1m+VP2_lvPN12ACh0.50.1%0.0
lLN2X043ACh0.50.1%0.0
lLN2T_a3ACh0.50.1%0.0
v2LN34A1Glu0.30.0%0.0
v2LN421Glu0.30.0%0.0
l2LN211GABA0.30.0%0.0
lLN151GABA0.30.0%0.0
DNge0751ACh0.30.0%0.0
ALON32Glu0.30.0%0.0
VES0911GABA0.30.0%0.0
M_l2PNm141ACh0.30.0%0.0
DNb051ACh0.30.0%0.0
M_lvPNm411ACh0.30.0%0.0
v2LN52ACh0.30.0%0.0
CB34172unc0.30.0%0.0
VP1m+VP5_ilPN2ACh0.30.0%0.0
lLN2P_a2GABA0.30.0%0.0
M_adPNm52ACh0.30.0%0.0
DNp321unc0.20.0%0.0
CB31721unc0.20.0%0.0
M_VPNml661GABA0.20.0%0.0
VP1d+VP4_l2PN11ACh0.20.0%0.0
VL1_ilPN1ACh0.20.0%0.0
CB06821GABA0.20.0%0.0
M_lv2PN9t49_b1GABA0.20.0%0.0
VL1_vPN1GABA0.20.0%0.0
CB30071GABA0.20.0%0.0
M_imPNl921ACh0.20.0%0.0
GNG1211GABA0.20.0%0.0
VA7l_adPN1ACh0.20.0%0.0
M_adPNm71ACh0.20.0%0.0
SLP2361ACh0.20.0%0.0
DNd041Glu0.20.0%0.0
ALIN41GABA0.20.0%0.0
VL2a_adPN1ACh0.20.0%0.0
v2LN34D1Glu0.20.0%0.0
VP2+_adPN1ACh0.20.0%0.0
vLN241ACh0.20.0%0.0
aDT415-HT0.20.0%0.0
DA1_vPN1GABA0.20.0%0.0
lLN1_a1ACh0.20.0%0.0
lLN2T_d1unc0.20.0%0.0
ALIN81ACh0.20.0%0.0
CB28451unc0.20.0%0.0
VP1m+_lvPN1Glu0.20.0%0.0
VA1v_vPN1GABA0.20.0%0.0
ALIN61GABA0.20.0%0.0

Outputs

downstream
partner
#NTconns
v2LN4
%
Out
CV
TRN_VP3a6ACh131.712.5%0.2
v2LN46ACh89.28.4%0.1
vLN254Glu83.27.9%0.2
VP3+_l2PN6ACh646.1%0.1
l2LN223unc63.76.0%0.0
MZ_lv2PN2GABA565.3%0.0
AL-AST13ACh45.54.3%0.3
v2LN312unc45.24.3%0.0
VP5+VP3_l2PN2ACh37.73.6%0.0
DNb052ACh31.33.0%0.0
ALON12ACh24.22.3%0.0
ALON34Glu22.32.1%0.0
l2LN234GABA21.22.0%0.1
M_l2PNm152ACh16.31.5%0.0
M_spPN4t92ACh15.31.5%0.0
l2LN212GABA14.51.4%0.0
PPM12014DA12.71.2%0.2
CB341710unc12.31.2%0.8
v2LN384ACh11.81.1%0.3
M_l2PN10t194ACh11.51.1%0.3
M_l2PNm172ACh10.31.0%0.0
VP2+VC5_l2PN2ACh9.30.9%0.0
v2LN494Glu9.30.9%0.4
VP3+VP1l_ivPN2ACh90.9%0.0
VP1m+VP2_lvPN28ACh8.80.8%0.6
VP2_l2PN2ACh80.8%0.0
M_spPN5t102ACh7.70.7%0.0
CB10488Glu7.70.7%0.8
M_lPNm11A6ACh7.20.7%0.4
VES0912GABA6.30.6%0.0
lLN2F_b4GABA6.30.6%0.4
M_VPNml665GABA60.6%0.8
VP1l+VP3_ilPN2ACh5.80.6%0.0
M_lv2PN9t49_a2GABA5.50.5%0.0
VP5+Z_adPN2ACh5.30.5%0.0
v2LN34E7Glu5.30.5%0.7
M_smPNm12GABA4.80.5%0.0
v2LN34A6Glu4.70.4%0.7
M_lvPNm488ACh4.70.4%0.5
l2LN205GABA4.20.4%0.5
DNbe0072ACh4.20.4%0.0
M_lvPNm474ACh40.4%0.4
lLN2T_b4ACh3.70.3%0.4
VP3+_vPN2GABA3.50.3%0.0
HRN_VP59ACh3.30.3%0.8
lLN2F_a4unc3.30.3%0.3
lLN12A7ACh3.30.3%0.4
CB06831ACh30.3%0.0
v2LN52ACh30.3%0.0
VP1m+VP5_ilPN2ACh30.3%0.0
v2LN425Glu2.80.3%0.6
v2LN39a4Glu2.70.3%0.3
DNde0012Glu2.70.3%0.0
M_l2PNm164ACh2.70.3%0.3
CB40835Glu2.50.2%0.6
VP1m+_lvPN4Glu2.50.2%0.4
v2LN504Glu2.30.2%0.6
v2LN322Glu2.20.2%0.0
ALIN22ACh2.20.2%0.0
DNd042Glu20.2%0.0
M_l2PNl232ACh1.80.2%0.0
CB06504Glu1.70.2%0.2
VP1m+VP2_lvPN12ACh1.70.2%0.0
VP4+VL1_l2PN2ACh1.70.2%0.0
VES0131ACh1.50.1%0.0
SAD0091ACh1.50.1%0.0
VC5_lvPN1ACh1.50.1%0.0
VP2+Z_lvPN4ACh1.50.1%0.1
v2LN34F4ACh1.50.1%0.1
lLN2T_a3ACh1.30.1%0.0
OA-VUMa2 (M)2OA1.20.1%0.1
VP2+_adPN2ACh1.20.1%0.0
M_adPNm32ACh1.20.1%0.0
CB34472GABA10.1%0.0
v2LN34D4Glu10.1%0.2
GNG1761ACh0.80.1%0.0
OA-VUMa5 (M)1OA0.80.1%0.0
GNG2871GABA0.80.1%0.0
VP2_adPN1ACh0.80.1%0.0
VM4_lvPN3ACh0.80.1%0.3
VP1d+VP4_l2PN22ACh0.80.1%0.0
VA1v_vPN2GABA0.70.1%0.5
v2LN332ACh0.70.1%0.5
mAL62GABA0.70.1%0.5
lLN2T_e1ACh0.70.1%0.0
OLVC11ACh0.70.1%0.0
M_vPNml632GABA0.70.1%0.5
SAD0361Glu0.70.1%0.0
lLN2X052ACh0.70.1%0.5
v2LN412unc0.70.1%0.0
lLN1_bc3ACh0.70.1%0.2
ALIN51GABA0.50.0%0.0
SAD0701GABA0.50.0%0.0
SLP2361ACh0.50.0%0.0
V_l2PN1ACh0.50.0%0.0
PLP2451ACh0.50.0%0.0
M_vPNml751GABA0.50.0%0.0
v2LN3A2unc0.50.0%0.3
LHAD4a11Glu0.50.0%0.0
SLP2341ACh0.50.0%0.0
SAD0711GABA0.50.0%0.0
DNp321unc0.50.0%0.0
CB15452Glu0.50.0%0.3
M_adPNm52ACh0.50.0%0.0
lLN2X123ACh0.50.0%0.0
lLN1_a2ACh0.50.0%0.0
VL1_ilPN2ACh0.50.0%0.0
M_l2PN3t182ACh0.50.0%0.0
vLN292unc0.50.0%0.0
v2LNX012unc0.50.0%0.0
M_smPN6t21GABA0.30.0%0.0
PS2141Glu0.30.0%0.0
M_vPNml601GABA0.30.0%0.0
VP1d+VP4_l2PN11ACh0.30.0%0.0
CB37101ACh0.30.0%0.0
ALIN81ACh0.30.0%0.0
VP1d_il2PN1ACh0.30.0%0.0
ALON21ACh0.30.0%0.0
VM4_adPN1ACh0.30.0%0.0
VP4+_vPN1GABA0.30.0%0.0
lLN2X041ACh0.30.0%0.0
lLN2P_b2GABA0.30.0%0.0
lLN2X112ACh0.30.0%0.0
M_vPNml772GABA0.30.0%0.0
ALIN42GABA0.30.0%0.0
ORN_VL11ACh0.20.0%0.0
M_imPNl921ACh0.20.0%0.0
l2LN191GABA0.20.0%0.0
v2LN461Glu0.20.0%0.0
M_vPNml651GABA0.20.0%0.0
v2LN301unc0.20.0%0.0
WED1821ACh0.20.0%0.0
M_lv2PN9t49_b1GABA0.20.0%0.0
lLN2P_c1GABA0.20.0%0.0
DNbe0031ACh0.20.0%0.0
CRE0741Glu0.20.0%0.0
GNG1211GABA0.20.0%0.0
DC4_vPN1GABA0.20.0%0.0
ALBN11unc0.20.0%0.0
ALIN71GABA0.20.0%0.0
lLN2R_a1GABA0.20.0%0.0
M_l2PNl221ACh0.20.0%0.0
WED0691ACh0.20.0%0.0
DNge0751ACh0.20.0%0.0
DM2_lPN1ACh0.20.0%0.0
VC1_lPN1ACh0.20.0%0.0
SLP2391ACh0.20.0%0.0
lLN131GABA0.20.0%0.0
lLN141GABA0.20.0%0.0
M_lvPNm331ACh0.20.0%0.0
AL-MBDL11ACh0.20.0%0.0