Male CNS – Cell Type Explorer

mesVUM-MJ(M)[T2]{00B}

1
Total Neurons
4,556
Total Synapses
Post: 4,540 | Pre: 16
log ratio : -8.15
4,556
Mean Synapses
Post: 4,540 | Pre: 16
log ratio : -8.15
unc(38.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (12 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)1,99944.0%-8.97425.0%
WTct(UTct-T2)(R)1,63636.0%-10.6816.2%
IntTct55212.2%-8.11212.5%
VNC-unspecified1663.7%-inf00.0%
Ov(L)781.7%-inf00.0%
LTct390.9%-4.29212.5%
NTct(UTct-T1)(L)300.7%-inf00.0%
NTct(UTct-T1)(R)240.5%-inf00.0%
PDMN(R)40.1%0.32531.2%
Ov(R)60.1%-inf00.0%
LegNp(T2)(L)40.1%-inf00.0%
PDMN(L)20.0%0.00212.5%

Connectivity

Inputs

upstream
partner
#NTconns
mesVUM-MJ
%
In
CV
IN19B057 (L)4ACh3918.8%0.2
IN17A111 (L)3ACh2255.1%0.3
IN06B085 (L)4GABA2225.0%0.5
IN19B057 (R)3ACh2104.7%0.1
IN03B054 (L)3GABA1904.3%0.4
IN19B075 (L)4ACh1784.0%0.4
IN06B085 (R)4GABA1703.8%0.2
IN19B075 (R)4ACh1643.7%0.7
IN17A111 (R)3ACh1583.6%0.1
IN06B070 (R)4GABA1453.3%0.5
IN06B069 (R)3GABA1363.1%0.9
IN03B054 (R)3GABA1272.9%0.3
IN17A100 (L)1ACh1182.7%0.0
IN17A100 (R)1ACh972.2%0.0
ANXXX169 (L)4Glu932.1%0.6
IN17A097 (L)1ACh912.1%0.0
ANXXX169 (R)4Glu872.0%0.5
IN06B070 (L)4GABA872.0%0.4
DNp48 (R)1ACh861.9%0.0
DNp48 (L)1ACh841.9%0.0
IN06B069 (L)3GABA831.9%1.0
IN17A097 (R)1ACh721.6%0.0
IN19B086 (R)4ACh601.4%1.1
DNg27 (R)1Glu561.3%0.0
IN03B085 (R)2GABA441.0%0.2
IN19B084 (R)3ACh431.0%0.1
IN08A040 (R)2Glu420.9%0.7
IN08A011 (L)3Glu410.9%0.6
IN19B084 (L)3ACh400.9%0.7
DNpe035 (R)1ACh390.9%0.0
IN08A040 (L)3Glu360.8%0.7
IN19B070 (R)2ACh350.8%0.1
ANXXX202 (R)2Glu330.7%0.3
IN19B086 (L)3ACh330.7%0.4
IN08A011 (R)3Glu320.7%0.7
EN00B001 (M)1unc310.7%0.0
DNg27 (L)1Glu290.7%0.0
DNpe035 (L)1ACh280.6%0.0
IN11B015 (L)2GABA280.6%0.7
IN03B085 (L)1GABA240.5%0.0
IN11B015 (R)2GABA220.5%0.0
AN27X009 (L)1ACh210.5%0.0
EN00B008 (M)1unc200.5%0.0
DNpe053 (R)1ACh200.5%0.0
DNpe053 (L)1ACh160.4%0.0
IN19B067 (L)2ACh150.3%0.9
IN17A113,IN17A119 (R)2ACh150.3%0.3
EN00B011 (M)2unc140.3%0.6
AN05B101 (L)1GABA120.3%0.0
IN03B089 (L)4GABA120.3%0.3
AN05B101 (R)1GABA100.2%0.0
IN17A113,IN17A119 (L)2ACh100.2%0.2
IN03B089 (R)5GABA100.2%0.5
DNpe036 (R)1ACh90.2%0.0
DNge172 (R)1ACh90.2%0.0
TN1a_g (L)2ACh90.2%0.8
IN19B031 (R)1ACh80.2%0.0
IN12B016 (L)1GABA80.2%0.0
IN27X007 (R)1unc80.2%0.0
IN19B067 (R)3ACh80.2%0.2
IN17A085 (R)1ACh70.2%0.0
IN19B020 (R)1ACh70.2%0.0
AN09B037 (L)1unc70.2%0.0
AN05B097 (L)1ACh70.2%0.0
AN27X009 (R)2ACh70.2%0.7
IN19B090 (R)2ACh70.2%0.4
SNpp2315-HT60.1%0.0
DNge150 (M)1unc60.1%0.0
IN19B070 (L)2ACh60.1%0.7
EN00B015 (M)2unc60.1%0.3
IN12B016 (R)1GABA50.1%0.0
IN03B075 (R)1GABA50.1%0.0
IN06B066 (R)1GABA50.1%0.0
IN19B041 (L)1ACh50.1%0.0
IN00A001 (M)1unc50.1%0.0
IN17A016 (L)1ACh50.1%0.0
IN04B002 (L)1ACh50.1%0.0
DNpe036 (L)1ACh50.1%0.0
DNg50 (L)1ACh50.1%0.0
MNad21 (R)1unc40.1%0.0
IN16B072 (L)1Glu40.1%0.0
DLMn a, b (R)1unc40.1%0.0
AN27X015 (R)1Glu40.1%0.0
AN06A030 (R)1Glu40.1%0.0
AN06A030 (L)1Glu40.1%0.0
SAxx011ACh40.1%0.0
AN09B037 (R)1unc40.1%0.0
ANXXX136 (L)1ACh40.1%0.0
DNp13 (R)1ACh40.1%0.0
IN19B058 (R)2ACh40.1%0.5
IN06B066 (L)2GABA40.1%0.5
IN19B043 (L)2ACh40.1%0.5
AN05B097 (R)2ACh40.1%0.5
IN19B090 (L)3ACh40.1%0.4
IN03B075 (L)2GABA40.1%0.0
IN12A053_a (L)1ACh30.1%0.0
IN19B031 (L)1ACh30.1%0.0
TN1a_h (L)1ACh30.1%0.0
ANXXX202 (L)1Glu30.1%0.0
AN01A021 (R)1ACh30.1%0.0
IN00A043 (M)2GABA30.1%0.3
IN27X003 (R)1unc20.0%0.0
SNxx161unc20.0%0.0
IN19B094 (L)1ACh20.0%0.0
IN17A085 (L)1ACh20.0%0.0
IN19B058 (L)1ACh20.0%0.0
IN16B072 (R)1Glu20.0%0.0
IN19B041 (R)1ACh20.0%0.0
TN1a_g (R)1ACh20.0%0.0
IN19B077 (L)1ACh20.0%0.0
IN18B026 (L)1ACh20.0%0.0
IN18B026 (R)1ACh20.0%0.0
INXXX315 (R)1ACh20.0%0.0
IN17A032 (L)1ACh20.0%0.0
DLMn c-f (L)1unc20.0%0.0
AN27X018 (R)1Glu20.0%0.0
DNge151 (M)1unc20.0%0.0
AN27X015 (L)1Glu20.0%0.0
DNg70 (R)1GABA20.0%0.0
IN19B043 (R)2ACh20.0%0.0
IN17A088, IN17A089 (L)2ACh20.0%0.0
IN06B080 (R)2GABA20.0%0.0
IN17A088, IN17A089 (R)2ACh20.0%0.0
IN03B046 (R)2GABA20.0%0.0
IN00A032 (M)2GABA20.0%0.0
IN19B103 (L)1ACh10.0%0.0
SNxx321unc10.0%0.0
SNpp071ACh10.0%0.0
IN06B059 (L)1GABA10.0%0.0
IN06B080 (L)1GABA10.0%0.0
IN17A067 (R)1ACh10.0%0.0
IN06B059 (R)1GABA10.0%0.0
IN17A077 (L)1ACh10.0%0.0
IN23B061 (L)1ACh10.0%0.0
IN16B068_c (L)1Glu10.0%0.0
IN00A044 (M)1GABA10.0%0.0
IN06B077 (L)1GABA10.0%0.0
IN06B083 (L)1GABA10.0%0.0
IN19B040 (L)1ACh10.0%0.0
TN1a_b (R)1ACh10.0%0.0
TN1a_i (R)1ACh10.0%0.0
IN13B104 (L)1GABA10.0%0.0
IN03B043 (R)1GABA10.0%0.0
IN17B001 (L)1GABA10.0%0.0
IN12A036 (L)1ACh10.0%0.0
INXXX133 (L)1ACh10.0%0.0
IN00A017 (M)1unc10.0%0.0
tp1 MN (R)1unc10.0%0.0
IN27X007 (L)1unc10.0%0.0
IN12A005 (L)1ACh10.0%0.0
AN27X018 (L)1Glu10.0%0.0
ANXXX033 (R)1ACh10.0%0.0
ANXXX308 (R)1ACh10.0%0.0
DNg03 (L)1ACh10.0%0.0
ANXXX139 (R)1GABA10.0%0.0
DNg77 (L)1ACh10.0%0.0
DNpe033 (R)1GABA10.0%0.0
DNge137 (L)1ACh10.0%0.0
DNpe041 (R)1GABA10.0%0.0
DNpe031 (R)1Glu10.0%0.0
DNp68 (L)1ACh10.0%0.0
AN05B004 (R)1GABA10.0%0.0
DNg98 (L)1GABA10.0%0.0
DNge083 (R)1Glu10.0%0.0

Outputs

downstream
partner
#NTconns
mesVUM-MJ
%
Out
CV
EN00B001 (M)1unc738.9%0.0
EN00B015 (M)2unc316.7%0.3
EN00B008 (M)1unc211.1%0.0
EN00B011 (M)2unc211.1%0.0
IN19B057 (R)1ACh15.6%0.0
IN19B075 (R)1ACh15.6%0.0
IN19B075 (L)1ACh15.6%0.0
DLMn c-f (R)1unc15.6%0.0