Male CNS – Cell Type Explorer

l-LNv(L)

8
Total Neurons
Right: 4 | Left: 4
log ratio : 0.00
5,755
Total Synapses
Post: 4,087 | Pre: 1,668
log ratio : -1.29
1,438.8
Mean Synapses
Post: 1,021.8 | Pre: 417
log ratio : -1.29
unc(55.0% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
-
-
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
86.55.24.26664.5----172.5
175.22.80.5--0.5----179
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
--------
--------
AME
287.5
6
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
160.8
4.2

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
Optic-unspecified(L)1,32032.3%-3.651056.3%
ME(L)66016.1%0.1271642.9%
AME(L)1,11227.2%-7.1280.5%
ME(R)3097.6%1.3578847.2%
CentralBrain-unspecified64315.7%-5.24171.0%
AME(R)380.9%-1.25161.0%
Optic-unspecified(R)50.1%1.85181.1%

Connectivity

Inputs

upstream
partner
#NTconns
l-LNv
%
In
CV
aMe2 (L)4Glu264.526.9%0.2
aMe4 (L)10ACh168.217.1%0.5
MeVC20 (L)2Glu149.815.2%0.1
MeVPMe12 (R)2ACh61.26.2%0.1
MeVPMe12 (L)2ACh35.23.6%0.5
MeVC22 (L)2Glu24.52.5%0.3
Mi15 (L)23ACh20.22.1%0.8
Cm20 (L)7GABA19.82.0%1.2
HBeyelet (L)4HA19.52.0%1.0
Mi1 (R)55ACh16.21.7%0.4
Mi1 (L)52ACh16.21.7%0.4
aMe17e (L)1Glu12.21.2%0.0
aMe4 (R)9ACh121.2%0.7
aMe6b (L)1ACh6.80.7%0.0
aMe17e (R)1Glu6.50.7%0.0
DNpe053 (L)1ACh6.20.6%0.0
aMe12 (L)3ACh60.6%0.4
OA-AL2i3 (L)2OA5.50.6%0.3
aMe1 (L)2GABA5.50.6%0.2
MeVCMe1 (R)2ACh5.50.6%0.4
Cm14 (L)2GABA4.80.5%0.8
Tm3 (R)18ACh4.80.5%0.2
aMe30 (L)3Glu4.50.5%0.5
OA-AL2i3 (R)2OA4.50.5%0.1
Tm3 (L)17ACh4.50.5%0.2
MeVCMe1 (L)2ACh4.20.4%0.2
aMe5 (L)10ACh40.4%0.6
Dm9 (R)9Glu3.80.4%0.6
aMe2 (R)4Glu3.80.4%0.6
Tm5c (L)9Glu3.20.3%0.5
Mi15 (R)11ACh3.20.3%0.3
Cm35 (L)1GABA30.3%0.0
aMe6c (L)2Glu30.3%0.2
R8p4HA2.50.3%1.0
Dm9 (L)7Glu2.50.3%0.5
Dm2 (L)5ACh2.50.3%0.5
aMe17a (L)1unc2.20.2%0.0
l-LNv (L)3unc2.20.2%0.3
MeVPaMe2 (R)1Glu20.2%0.0
R7p2HA20.2%0.8
aMe12 (R)2ACh20.2%0.0
l-LNv (R)4unc1.80.2%0.5
L3 (R)7ACh1.80.2%0.0
MeVP14 (L)1ACh1.50.2%0.0
MeVP38 (L)1ACh1.50.2%0.0
aMe30 (R)2Glu1.50.2%0.7
Cm10 (L)4GABA1.50.2%0.3
L1 (R)5Glu1.50.2%0.3
Mi19 (R)2unc1.20.1%0.6
aMe_unclear (L)1Glu1.20.1%0.0
aMe9 (R)1ACh1.20.1%0.0
R8y5HA1.20.1%0.0
Cm30 (L)2GABA1.20.1%0.2
L5 (R)3ACh10.1%0.4
T2 (L)3ACh10.1%0.4
Cm22 (L)1GABA10.1%0.0
MeVP1 (L)3ACh10.1%0.4
L1 (L)4Glu10.1%0.0
Lawf1 (R)4ACh10.1%0.0
aMe26 (L)1ACh0.80.1%0.0
L5 (L)1ACh0.80.1%0.0
5thsLNv_LNd6 (L)1ACh0.80.1%0.0
MeLo1 (L)2ACh0.80.1%0.3
ME_unclear (L)1Glu0.80.1%0.0
R8_unclear2HA0.80.1%0.3
L3 (L)2ACh0.80.1%0.3
MeLo2 (L)3ACh0.80.1%0.0
Dm10 (R)3GABA0.80.1%0.0
Dm6 (L)3Glu0.80.1%0.0
Dm20 (L)3Glu0.80.1%0.0
aMe5 (R)1ACh0.50.1%0.0
R8p (L)1HA0.50.1%0.0
R7d1HA0.50.1%0.0
CL125 (L)1Glu0.50.1%0.0
Tm5c (R)1Glu0.50.1%0.0
C3 (L)1GABA0.50.1%0.0
Cm21 (L)1GABA0.50.1%0.0
MeVP3 (L)1ACh0.50.1%0.0
MeVPMe13 (R)1ACh0.50.1%0.0
C2 (R)2GABA0.50.1%0.0
C2 (L)2GABA0.50.1%0.0
Cm11a (L)2ACh0.50.1%0.0
MeVP8 (L)1ACh0.50.1%0.0
MeVP7 (L)2ACh0.50.1%0.0
MeVP9 (L)1ACh0.50.1%0.0
Cm2 (L)2ACh0.50.1%0.0
Dm20 (R)2Glu0.50.1%0.0
Cm-DRA (L)2ACh0.50.1%0.0
Lat3 (R)1unc0.20.0%0.0
Cm5 (L)1GABA0.20.0%0.0
aMe1 (R)1GABA0.20.0%0.0
Lat2 (L)1unc0.20.0%0.0
DN1a (R)1Glu0.20.0%0.0
MeVC20 (R)1Glu0.20.0%0.0
DNc01 (L)1unc0.20.0%0.0
MeVPMe11 (L)1Glu0.20.0%0.0
DNc02 (L)1unc0.20.0%0.0
OA-AL2i4 (R)1OA0.20.0%0.0
MeVPMe13 (L)1ACh0.20.0%0.0
aMe6a (L)1ACh0.20.0%0.0
Mi2 (L)1Glu0.20.0%0.0
Mi10 (L)1ACh0.20.0%0.0
Cm23 (L)1Glu0.20.0%0.0
DN1a (L)1Glu0.20.0%0.0
Cm28 (L)1Glu0.20.0%0.0
AN09A005 (L)1unc0.20.0%0.0
Dm12 (L)1Glu0.20.0%0.0
MeTu3c (L)1ACh0.20.0%0.0
MeLo7 (L)1ACh0.20.0%0.0
C3 (R)1GABA0.20.0%0.0
Cm11d (L)1ACh0.20.0%0.0
Mi18 (L)1GABA0.20.0%0.0
Mi19 (L)1unc0.20.0%0.0
aMe15 (L)1ACh0.20.0%0.0
MeVPaMe1 (L)1ACh0.20.0%0.0
MeVP53 (L)1GABA0.20.0%0.0
L4 (L)1ACh0.20.0%0.0
Tm2 (L)1ACh0.20.0%0.0
MeTu3b (L)1ACh0.20.0%0.0
aMe9 (L)1ACh0.20.0%0.0
MeLo2 (R)1ACh0.20.0%0.0
Dm18 (R)1GABA0.20.0%0.0
MeVP12 (L)1ACh0.20.0%0.0
aMe10 (L)1ACh0.20.0%0.0
Cm24 (L)1Glu0.20.0%0.0
AN27X013 (R)1unc0.20.0%0.0
MeVC27 (R)1unc0.20.0%0.0
LoVP53 (L)1ACh0.20.0%0.0
DNc01 (R)1unc0.20.0%0.0
Dm10 (L)1GABA0.20.0%0.0
Cm3 (L)1GABA0.20.0%0.0
Dm-DRA1 (L)1Glu0.20.0%0.0
Tm16 (R)1ACh0.20.0%0.0
Lawf2 (L)1ACh0.20.0%0.0
AN09A005 (R)1unc0.20.0%0.0
R7y1HA0.20.0%0.0
aMe8 (L)1unc0.20.0%0.0
MeVPaMe1 (R)1ACh0.20.0%0.0
Cm35 (R)1GABA0.20.0%0.0

Outputs

downstream
partner
#NTconns
l-LNv
%
Out
CV
Mi1 (R)279ACh171.818.8%0.7
Mi1 (L)276ACh153.216.7%0.6
Tm3 (R)257ACh12713.9%0.6
Tm3 (L)259ACh111.512.2%0.6
Lawf1 (L)60ACh23.82.6%0.5
Lawf1 (R)56ACh20.52.2%0.5
Tm5c (L)53Glu161.7%0.4
Tm5c (R)50Glu15.81.7%0.6
Tm6 (L)32ACh121.3%0.5
Dm6 (L)20Glu11.51.3%0.6
Tm6 (R)31ACh101.1%0.4
Dm9 (R)28Glu9.81.1%0.4
MeVPMe12 (R)2ACh7.80.8%0.2
Cm35 (R)1GABA7.50.8%0.0
aMe30 (L)3Glu70.8%0.3
C3 (R)24GABA6.80.7%0.3
aMe30 (R)2Glu6.50.7%0.0
Dm6 (R)12Glu60.7%0.8
Dm9 (L)18Glu5.80.6%0.4
aMe4 (L)8ACh5.20.6%0.6
L1 (R)15Glu50.5%0.6
Mi15 (R)18ACh50.5%0.4
Lawf2 (R)17ACh50.5%0.4
MeVCMe1 (R)2ACh4.50.5%0.3
MeLo2 (R)12ACh4.50.5%0.4
C2 (L)15GABA4.50.5%0.3
Dm10 (L)17GABA4.50.5%0.2
Mi15 (L)17ACh4.50.5%0.2
L5 (L)13ACh4.20.5%0.6
MeLo2 (L)13ACh4.20.5%0.6
C2 (R)16GABA4.20.5%0.2
C3 (L)16GABA4.20.5%0.2
L5 (R)10ACh40.4%1.1
Dm10 (R)13GABA40.4%0.3
MeVCMe1 (L)2ACh3.80.4%0.3
L1 (L)13Glu3.80.4%0.3
Tm20 (R)13ACh3.50.4%0.2
Cm35 (L)1GABA30.3%0.0
MeVPMe12 (L)2ACh30.3%0.3
Dm20 (R)8Glu30.3%0.6
l-LNv (R)4unc2.80.3%0.5
aMe4 (R)6ACh2.80.3%0.2
Lawf2 (L)11ACh2.80.3%0.0
R8p2HA2.50.3%0.6
Tm20 (L)10ACh2.50.3%0.0
R7p2HA2.20.2%0.6
TmY5a (L)6Glu2.20.2%0.5
l-LNv (L)3unc2.20.2%0.3
TmY5a (R)9Glu2.20.2%0.0
T2 (R)6ACh20.2%0.4
MeLo1 (L)8ACh20.2%0.0
Tm37 (R)4Glu1.80.2%0.5
L4 (R)5ACh1.80.2%0.6
OA-AL2i3 (R)2OA1.80.2%0.1
Mi4 (R)6GABA1.80.2%0.3
T2 (L)6ACh1.80.2%0.3
Tm12 (L)7ACh1.80.2%0.0
Mi4 (L)7GABA1.80.2%0.0
aMe12 (L)3ACh1.50.2%0.4
Mi14 (R)5Glu1.50.2%0.3
aMe12 (R)2ACh1.50.2%0.3
aMe2 (L)3Glu1.50.2%0.4
MeLo1 (R)5ACh1.50.2%0.3
MeVC20 (L)2Glu1.20.1%0.6
Dm19 (L)3Glu1.20.1%0.6
Tm12 (R)4ACh1.20.1%0.3
TmY18 (R)4ACh1.20.1%0.3
Dm18 (L)4GABA1.20.1%0.3
T1 (R)4HA1.20.1%0.3
L4 (L)5ACh1.20.1%0.0
Tm4 (L)5ACh1.20.1%0.0
TmY10 (L)5ACh1.20.1%0.0
R8_unclear5HA1.20.1%0.0
Cm23 (L)3Glu10.1%0.4
aMe6c (R)1Glu10.1%0.0
Mi19 (L)2unc10.1%0.5
OA-AL2i3 (L)2OA10.1%0.5
Tm37 (L)4Glu10.1%0.0
L3 (L)4ACh10.1%0.0
Tm9 (L)2ACh0.80.1%0.3
aMe17e (L)1Glu0.80.1%0.0
aMe17e (R)1Glu0.80.1%0.0
L2 (R)2ACh0.80.1%0.3
Tm4 (R)3ACh0.80.1%0.0
L3 (R)3ACh0.80.1%0.0
Dm20 (L)3Glu0.80.1%0.0
Dm1 (R)3Glu0.80.1%0.0
Dm18 (R)3GABA0.80.1%0.0
Mi2 (R)3Glu0.80.1%0.0
Tm9 (R)3ACh0.80.1%0.0
Mi9 (R)3Glu0.80.1%0.0
Mi10 (R)3ACh0.80.1%0.0
Cm20 (R)1GABA0.50.1%0.0
aMe1 (R)1GABA0.50.1%0.0
aMe6b (R)1ACh0.50.1%0.0
R8y1HA0.50.1%0.0
MeVP51 (L)1Glu0.50.1%0.0
Cm8 (L)1GABA0.50.1%0.0
L2 (L)1ACh0.50.1%0.0
Mi9 (L)2Glu0.50.1%0.0
Mi14 (L)2Glu0.50.1%0.0
Mi2 (L)2Glu0.50.1%0.0
Dm16 (L)2Glu0.50.1%0.0
Tm2 (L)2ACh0.50.1%0.0
MeVP11 (L)1ACh0.50.1%0.0
5thsLNv_LNd6 (L)1ACh0.50.1%0.0
aMe3 (R)1Glu0.50.1%0.0
Cm11c (L)1ACh0.50.1%0.0
aMe6c (L)1Glu0.50.1%0.0
Dm3a (L)2Glu0.50.1%0.0
Mi19 (R)2unc0.50.1%0.0
MeVPLo1 (L)2Glu0.50.1%0.0
Dm17 (R)2Glu0.50.1%0.0
Tm5Y (L)1ACh0.20.0%0.0
aMe5 (L)1ACh0.20.0%0.0
AN09A005 (L)1unc0.20.0%0.0
TmY9b (L)1ACh0.20.0%0.0
Dm8b (L)1Glu0.20.0%0.0
Tm1 (L)1ACh0.20.0%0.0
Tm5a (L)1ACh0.20.0%0.0
aMe_unclear (L)1Glu0.20.0%0.0
Tm5Y (R)1ACh0.20.0%0.0
TmY9a (R)1ACh0.20.0%0.0
T2a (L)1ACh0.20.0%0.0
aMe5 (R)1ACh0.20.0%0.0
TmY14 (R)1unc0.20.0%0.0
Cm19 (L)1GABA0.20.0%0.0
aMe10 (R)1ACh0.20.0%0.0
aMe3 (L)1Glu0.20.0%0.0
DN1a (L)1Glu0.20.0%0.0
MeVC20 (R)1Glu0.20.0%0.0
MeVPaMe1 (R)1ACh0.20.0%0.0
aMe_TBD1 (R)1GABA0.20.0%0.0
LC14b (L)1ACh0.20.0%0.0
Cm11b (L)1ACh0.20.0%0.0
ME_unclear (L)1Glu0.20.0%0.0
aMe2 (R)1Glu0.20.0%0.0
MeLo7 (L)1ACh0.20.0%0.0
Mi13 (L)1Glu0.20.0%0.0
TmY10 (R)1ACh0.20.0%0.0
MeTu4c (L)1ACh0.20.0%0.0
Cm5 (R)1GABA0.20.0%0.0
MeVP_unclear (L)1Glu0.20.0%0.0
Pm4 (R)1GABA0.20.0%0.0
Mi18 (R)1GABA0.20.0%0.0
s-LNv (L)1ACh0.20.0%0.0
MeVPMe3 (R)1Glu0.20.0%0.0
TmY3 (L)1ACh0.20.0%0.0
MeVC23 (L)1Glu0.20.0%0.0
Mi18 (L)1GABA0.20.0%0.0
MeVP2 (L)1ACh0.20.0%0.0
Dm1 (L)1Glu0.20.0%0.0
R7y1HA0.20.0%0.0
Cm1 (R)1ACh0.20.0%0.0
Tm39 (L)1ACh0.20.0%0.0
Tm5b (L)1ACh0.20.0%0.0
T2a (R)1ACh0.20.0%0.0
Dm11 (R)1Glu0.20.0%0.0
MeLo7 (R)1ACh0.20.0%0.0
Pm10 (L)1GABA0.20.0%0.0
aMe6a (R)1ACh0.20.0%0.0
MeVC1 (L)1ACh0.20.0%0.0
R7_unclear1HA0.20.0%0.0
TmY18 (L)1ACh0.20.0%0.0
Dm2 (R)1ACh0.20.0%0.0
MeVPLo1 (R)1Glu0.20.0%0.0