Male CNS – Cell Type Explorer

iii1 MN(R)[T2]{03B}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
7,480
Total Synapses
Post: 7,446 | Pre: 34
log ratio : -7.77
7,480
Mean Synapses
Post: 7,446 | Pre: 34
log ratio : -7.77
unc(53.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)3,55047.7%-8.62926.5%
LTct2,58534.7%-7.531441.2%
IntTct86811.7%-7.18617.6%
VNC-unspecified2813.8%-8.1312.9%
LegNp(T2)(R)660.9%-inf00.0%
WTct(UTct-T2)(L)460.6%-inf00.0%
MesoAN(R)230.3%-2.9438.8%
HTct(UTct-T3)(R)140.2%-3.8112.9%
Ov(R)130.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
iii1 MN
%
In
CV
IN02A010 (R)3Glu6589.5%0.7
IN17A064 (R)3ACh6349.2%0.1
IN06B061 (L)3GABA2874.2%0.4
IN17A048 (R)2ACh2794.0%0.2
IN01A017 (L)1ACh2353.4%0.0
IN08B078 (L)2ACh1612.3%0.0
DNp49 (R)1Glu1592.3%0.0
IN06B043 (L)3GABA1552.2%0.7
SNpp308ACh1532.2%0.8
IN03A003 (R)1ACh1502.2%0.0
DNp49 (L)1Glu1141.7%0.0
IN00A054 (M)6GABA1091.6%0.5
IN17A112 (R)2ACh1061.5%0.1
IN19B091 (L)8ACh1001.4%0.5
DNx012ACh861.2%0.3
AN23B002 (R)1ACh801.2%0.0
IN18B043 (L)1ACh791.1%0.0
IN18B049 (L)1ACh751.1%0.0
IN06B019 (R)1GABA741.1%0.0
AN18B004 (L)1ACh741.1%0.0
IN06B042 (R)1GABA721.0%0.0
IN00A022 (M)4GABA701.0%0.7
IN17A030 (R)1ACh691.0%0.0
IN06B042 (L)1GABA681.0%0.0
IN05B008 (L)1GABA620.9%0.0
IN11A011 (R)1ACh610.9%0.0
IN06B043 (R)3GABA610.9%0.6
IN17A032 (L)1ACh600.9%0.0
IN17A032 (R)1ACh590.9%0.0
IN06B019 (L)1GABA560.8%0.0
IN10B006 (L)1ACh560.8%0.0
IN05B032 (L)1GABA540.8%0.0
AN23B002 (L)1ACh540.8%0.0
IN11A027_b (R)1ACh490.7%0.0
SNpp092ACh480.7%0.1
IN18B052 (L)1ACh460.7%0.0
IN12A006 (R)1ACh450.7%0.0
IN12A002 (R)2ACh450.7%0.8
IN08B035 (L)1ACh440.6%0.0
IN11A027_c (L)1ACh410.6%0.0
IN06A005 (L)1GABA410.6%0.0
IN11A021 (R)2ACh410.6%0.5
IN11A027_c (R)1ACh400.6%0.0
IN06B061 (R)3GABA380.6%0.5
IN08B075 (L)1ACh370.5%0.0
AN23B001 (R)1ACh370.5%0.0
IN17A030 (L)1ACh360.5%0.0
IN17A040 (L)1ACh350.5%0.0
DNpe021 (R)1ACh350.5%0.0
AN18B004 (R)1ACh350.5%0.0
IN11A027_a (R)1ACh340.5%0.0
IN11A027_b (L)1ACh340.5%0.0
IN06A005 (R)1GABA340.5%0.0
AN08B010 (L)2ACh330.5%0.8
IN17A029 (R)1ACh310.4%0.0
IN11B021_e (R)2GABA290.4%0.1
IN08B073 (L)1ACh280.4%0.0
IN17A095 (R)1ACh280.4%0.0
SNpp177ACh280.4%0.6
IN08B035 (R)1ACh260.4%0.0
IN11A015, IN11A027 (R)2ACh260.4%0.5
IN11B019 (R)4GABA260.4%0.4
SNpp538ACh260.4%0.5
IN11A025 (R)3ACh240.3%0.5
IN17A040 (R)1ACh230.3%0.0
INXXX044 (R)2GABA230.3%0.1
IN17A107 (R)1ACh220.3%0.0
IN06B013 (R)1GABA220.3%0.0
DNp05 (R)1ACh220.3%0.0
IN18B042 (L)3ACh220.3%0.3
IN10B006 (R)1ACh210.3%0.0
IN08B078 (R)2ACh210.3%0.1
IN08A011 (R)3Glu210.3%0.3
IN11A027_a (L)1ACh200.3%0.0
IN08B083_d (R)2ACh200.3%0.2
IN18B042 (R)3ACh200.3%0.3
IN17A029 (L)1ACh190.3%0.0
AN23B001 (L)1ACh190.3%0.0
DNp11 (L)1ACh190.3%0.0
IN11A015, IN11A027 (L)2ACh190.3%0.7
IN02A026 (R)1Glu180.3%0.0
IN11B021_a (R)2GABA180.3%0.2
IN08B083_b (L)1ACh170.2%0.0
IN18B034 (L)1ACh170.2%0.0
IN04B087 (R)1ACh170.2%0.0
IN02A026 (L)1Glu170.2%0.0
IN06B013 (L)2GABA170.2%0.8
IN17A099 (R)2ACh170.2%0.6
IN08B083_a (L)2ACh170.2%0.4
IN08B083_a (R)2ACh170.2%0.3
IN17A078 (R)2ACh160.2%0.1
IN19B082 (L)2ACh160.2%0.1
IN17A071, IN17A081 (R)1ACh150.2%0.0
IN06A088 (R)2GABA150.2%0.9
IN07B083_b (L)1ACh140.2%0.0
IN11A011 (L)1ACh140.2%0.0
IN10B015 (R)1ACh140.2%0.0
AN08B010 (R)1ACh140.2%0.0
IN11A025 (L)2ACh140.2%0.7
IN17A048 (L)1ACh130.2%0.0
IN17A106_a (R)1ACh130.2%0.0
DNp05 (L)1ACh130.2%0.0
DNpe021 (L)1ACh130.2%0.0
IN08B068 (L)3ACh130.2%0.7
IN11A041 (L)1ACh120.2%0.0
IN08B068 (R)1ACh120.2%0.0
IN08B051_b (R)1ACh120.2%0.0
IN17A042 (R)1ACh120.2%0.0
AN19B001 (L)1ACh120.2%0.0
IN17A113 (R)1ACh110.2%0.0
SNpp042ACh110.2%0.3
IN00A056 (M)1GABA100.1%0.0
IN08B083_b (R)1ACh100.1%0.0
DNp59 (R)1GABA100.1%0.0
IN08B083_c (L)1ACh90.1%0.0
IN05B032 (R)1GABA90.1%0.0
IN17A042 (L)1ACh90.1%0.0
IN10B015 (L)1ACh90.1%0.0
IN06B077 (L)3GABA90.1%0.9
IN11B015 (R)1GABA80.1%0.0
DNa10 (L)1ACh80.1%0.0
AN19B001 (R)1ACh80.1%0.0
IN11B021_c (R)2GABA80.1%0.8
IN08B075 (R)1ACh70.1%0.0
IN08B051_b (L)1ACh70.1%0.0
IN17A035 (R)1ACh70.1%0.0
AN02A001 (R)1Glu70.1%0.0
IN03B070 (R)3GABA70.1%0.4
IN03B058 (R)3GABA70.1%0.4
vMS11 (R)4Glu70.1%0.5
IN06A088 (L)1GABA60.1%0.0
IN08A011 (L)1Glu60.1%0.0
IN08B073 (R)1ACh60.1%0.0
IN04B058 (R)1ACh60.1%0.0
SNta102ACh60.1%0.3
SApp043ACh60.1%0.4
IN11A021 (L)1ACh50.1%0.0
IN00A030 (M)1GABA50.1%0.0
IN08B083_c (R)1ACh50.1%0.0
IN07B033 (L)1ACh50.1%0.0
IN04B055 (R)1ACh50.1%0.0
IN17A023 (R)1ACh50.1%0.0
DNg74_b (L)1GABA50.1%0.0
SApp132ACh50.1%0.2
AN08B107 (R)1ACh40.1%0.0
IN11B021_b (R)1GABA40.1%0.0
IN08B063 (R)1ACh40.1%0.0
vMS11 (L)1Glu40.1%0.0
IN03B019 (L)1GABA40.1%0.0
IN12B002 (L)1GABA40.1%0.0
IN11A001 (R)1GABA40.1%0.0
AN08B049 (R)1ACh40.1%0.0
AN09B024 (L)1ACh40.1%0.0
AN19B024 (L)1ACh40.1%0.0
AN02A001 (L)1Glu40.1%0.0
SNpp102ACh40.1%0.5
IN06A002 (L)1GABA30.0%0.0
IN11A020 (L)1ACh30.0%0.0
IN08B083_d (L)1ACh30.0%0.0
IN17A039 (L)1ACh30.0%0.0
IN03B034 (R)1GABA30.0%0.0
IN17B004 (R)1GABA30.0%0.0
AN09B024 (R)1ACh30.0%0.0
AN02A002 (L)1Glu30.0%0.0
DNp11 (R)1ACh30.0%0.0
IN00A035 (M)2GABA30.0%0.3
IN17A085 (R)2ACh30.0%0.3
IN03B069 (R)2GABA30.0%0.3
vMS12_c (R)2ACh30.0%0.3
IN00A039 (M)2GABA30.0%0.3
SNpp121ACh20.0%0.0
IN08A016 (L)1Glu20.0%0.0
IN03B071 (R)1GABA20.0%0.0
IN00A004 (M)1GABA20.0%0.0
IN07B094_c (L)1ACh20.0%0.0
IN18B020 (L)1ACh20.0%0.0
IN03B074 (R)1GABA20.0%0.0
IN19A093 (R)1GABA20.0%0.0
IN08B104 (L)1ACh20.0%0.0
IN11A041 (R)1ACh20.0%0.0
IN16B072 (R)1Glu20.0%0.0
IN08B051_c (R)1ACh20.0%0.0
SNpp131ACh20.0%0.0
IN19B002 (L)1ACh20.0%0.0
IN11A022 (R)1ACh20.0%0.0
IN19B053 (L)1ACh20.0%0.0
IN06B017 (L)1GABA20.0%0.0
IN06B021 (L)1GABA20.0%0.0
INXXX058 (L)1GABA20.0%0.0
IN19A015 (R)1GABA20.0%0.0
IN11A001 (L)1GABA20.0%0.0
AN05B006 (R)1GABA20.0%0.0
SApp011ACh20.0%0.0
AN17A015 (R)1ACh20.0%0.0
AN03B039 (R)1GABA20.0%0.0
AN08B049 (L)1ACh20.0%0.0
AN05B107 (L)1ACh20.0%0.0
ANXXX057 (L)1ACh20.0%0.0
DNge138 (M)1unc20.0%0.0
DNa10 (R)1ACh20.0%0.0
IN19A111 (R)2GABA20.0%0.0
IN16B069 (R)2Glu20.0%0.0
AN17A003 (R)2ACh20.0%0.0
IN12A044 (R)1ACh10.0%0.0
IN13A022 (R)1GABA10.0%0.0
dMS5 (R)1ACh10.0%0.0
IN21A049 (R)1Glu10.0%0.0
IN19B055 (R)1ACh10.0%0.0
IN06A002 (R)1GABA10.0%0.0
IN07B016 (R)1ACh10.0%0.0
IN19B033 (R)1ACh10.0%0.0
IN12A012 (R)1GABA10.0%0.0
IN03B034 (L)1GABA10.0%0.0
IN06B024 (R)1GABA10.0%0.0
IN06B077 (R)1GABA10.0%0.0
IN03B068 (R)1GABA10.0%0.0
SNpp221ACh10.0%0.0
IN17A104 (R)1ACh10.0%0.0
IN11B021_d (R)1GABA10.0%0.0
IN07B098 (L)1ACh10.0%0.0
SNpp111ACh10.0%0.0
IN12A059_c (R)1ACh10.0%0.0
IN00A065 (M)1GABA10.0%0.0
IN12A059_a (R)1ACh10.0%0.0
SNxx281ACh10.0%0.0
IN06B052 (L)1GABA10.0%0.0
IN00A052 (M)1GABA10.0%0.0
SNpp331ACh10.0%0.0
IN17A064 (L)1ACh10.0%0.0
IN11A022 (L)1ACh10.0%0.0
vMS12_c (L)1ACh10.0%0.0
IN23B023 (L)1ACh10.0%0.0
IN18B034 (R)1ACh10.0%0.0
IN19B002 (R)1ACh10.0%0.0
IN08A016 (R)1Glu10.0%0.0
iii3 MN (R)1unc10.0%0.0
IN08B003 (R)1GABA10.0%0.0
IN23B013 (L)1ACh10.0%0.0
IN06B032 (L)1GABA10.0%0.0
IN12B014 (L)1GABA10.0%0.0
dMS5 (L)1ACh10.0%0.0
IN21A010 (L)1ACh10.0%0.0
IN19B007 (L)1ACh10.0%0.0
INXXX008 (L)1unc10.0%0.0
IN11B004 (L)1GABA10.0%0.0
IN06B016 (R)1GABA10.0%0.0
IN06B035 (R)1GABA10.0%0.0
IN07B002 (L)1ACh10.0%0.0
IN19B008 (L)1ACh10.0%0.0
IN07B016 (L)1ACh10.0%0.0
DNg15 (R)1ACh10.0%0.0
AN05B049_a (L)1GABA10.0%0.0
AN08B097 (R)1ACh10.0%0.0
AN07B003 (L)1ACh10.0%0.0
AN06B051 (R)1GABA10.0%0.0
ANXXX023 (L)1ACh10.0%0.0
EA06B010 (L)1Glu10.0%0.0
ANXXX084 (R)1ACh10.0%0.0
AN07B024 (R)1ACh10.0%0.0
AN08B009 (L)1ACh10.0%0.0
AN08B009 (R)1ACh10.0%0.0
ANXXX178 (L)1GABA10.0%0.0
AN03B009 (L)1GABA10.0%0.0
DNd03 (R)1Glu10.0%0.0
DNp03 (R)1ACh10.0%0.0
DNg15 (L)1ACh10.0%0.0

Outputs

downstream
partner
#NTconns
iii1 MN
%
Out
CV
IN17A064 (R)3ACh611.5%0.4
AN18B004 (L)1ACh47.7%0.0
AN18B004 (R)1ACh47.7%0.0
IN17A048 (R)2ACh47.7%0.5
SNpp171ACh23.8%0.0
IN06B061 (L)1GABA23.8%0.0
tpn MN (R)1unc23.8%0.0
IN01A017 (L)1ACh23.8%0.0
IN03A003 (R)1ACh23.8%0.0
IN02A010 (R)2Glu23.8%0.0
IN08B073 (L)1ACh11.9%0.0
IN12A012 (R)1GABA11.9%0.0
IN11A019 (R)1ACh11.9%0.0
IN11B021_e (R)1GABA11.9%0.0
IN11B021_d (R)1GABA11.9%0.0
IN11A041 (L)1ACh11.9%0.0
IN11B020 (R)1GABA11.9%0.0
IN07B055 (R)1ACh11.9%0.0
IN17A093 (R)1ACh11.9%0.0
IN08A011 (R)1Glu11.9%0.0
IN06B036 (L)1GABA11.9%0.0
IN06B047 (L)1GABA11.9%0.0
IN06B017 (L)1GABA11.9%0.0
IN06B043 (R)1GABA11.9%0.0
IN04B087 (R)1ACh11.9%0.0
IN06B058 (L)1GABA11.9%0.0
IN12A006 (R)1ACh11.9%0.0
tpn MN (L)1unc11.9%0.0
IN06B013 (L)1GABA11.9%0.0
IN05B008 (L)1GABA11.9%0.0
AN03B009 (L)1GABA11.9%0.0
DNpe021 (L)1ACh11.9%0.0