Male CNS – Cell Type Explorer

aPhM2a(R)

5
Total Neurons
Right: 2 | Left: 3
log ratio : 0.58
4,159
Total Synapses
Post: 1,376 | Pre: 2,783
log ratio : 1.02
2,079.5
Mean Synapses
Post: 688 | Pre: 1,391.5
log ratio : 1.02
ACh(71.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
GNG1,32996.6%1.032,72097.7%
CentralBrain-unspecified473.4%0.42632.3%

Connectivity

Inputs

upstream
partner
#NTconns
aPhM2a
%
In
CV
aPhM2a5ACh149.527.6%1.0
GNG035 (R)1GABA11020.3%0.0
GNG035 (L)1GABA90.516.7%0.0
aPhM119ACh407.4%0.7
GNG258 (R)1GABA9.51.8%0.0
GNG001 (M)1GABA91.7%0.0
aPhM42ACh91.7%0.8
GNG362 (R)1GABA81.5%0.0
aPhM2b2ACh71.3%0.3
GNG056 (L)15-HT6.51.2%0.0
aPhM35ACh6.51.2%0.5
GNG056 (R)15-HT5.51.0%0.0
MNx01 (L)2Glu5.51.0%0.1
aPhM51ACh3.50.6%0.0
GNG024 (L)1GABA3.50.6%0.0
GNG362 (L)1GABA3.50.6%0.0
GNG099 (R)1GABA30.6%0.0
GNG540 (L)15-HT30.6%0.0
GNG252 (L)1ACh30.6%0.0
GNG062 (R)1GABA30.6%0.0
GNG075 (L)1GABA30.6%0.0
GNG075 (R)1GABA30.6%0.0
GNG078 (L)1GABA2.50.5%0.0
GNG024 (R)1GABA2.50.5%0.0
GNG540 (R)15-HT2.50.5%0.0
GNG258 (L)1GABA2.50.5%0.0
ENS22ACh2.50.5%0.2
GNG062 (L)1GABA20.4%0.0
GNG298 (M)1GABA20.4%0.0
GNG252 (R)1ACh20.4%0.0
claw_tpGRN2ACh20.4%0.5
GNG068 (L)1Glu20.4%0.0
GNG081 (L)1ACh20.4%0.0
GNG168 (R)1Glu20.4%0.0
PhG21ACh1.50.3%0.0
GNG172 (L)1ACh1.50.3%0.0
GNG040 (L)1ACh1.50.3%0.0
MNx01 (R)1Glu1.50.3%0.0
GNG238 (L)1GABA1.50.3%0.0
GNG039 (L)1GABA1.50.3%0.0
GNG099 (L)1GABA1.50.3%0.0
GNG014 (L)1ACh1.50.3%0.0
GNG172 (R)1ACh10.2%0.0
GNG061 (L)1ACh10.2%0.0
GNG014 (R)1ACh10.2%0.0
GNG061 (R)1ACh10.2%0.0
PhG111ACh10.2%0.0
GNG391 (L)1GABA10.2%0.0
GNG483 (R)1GABA10.2%0.0
GNG033 (R)1ACh10.2%0.0
GNG068 (R)1Glu0.50.1%0.0
MN12D (R)1unc0.50.1%0.0
ENS11ACh0.50.1%0.0
GNG621 (R)1ACh0.50.1%0.0
GNG275 (R)1GABA0.50.1%0.0
GNG083 (R)1GABA0.50.1%0.0
GNG357 (R)1GABA0.50.1%0.0
GNG174 (L)1ACh0.50.1%0.0
GNG043 (L)1HA0.50.1%0.0
GNG702m (R)1unc0.50.1%0.0
GNG623 (L)1ACh0.50.1%0.0
GNG248 (L)1ACh0.50.1%0.0
PhG91ACh0.50.1%0.0
TPMN21ACh0.50.1%0.0
GNG620 (R)1ACh0.50.1%0.0
GNG605 (L)1GABA0.50.1%0.0
GNG393 (R)1GABA0.50.1%0.0
GNG066 (L)1GABA0.50.1%0.0
GNG053 (R)1GABA0.50.1%0.0
MN5 (R)1unc0.50.1%0.0
GNG037 (L)1ACh0.50.1%0.0
GNG033 (L)1ACh0.50.1%0.0

Outputs

downstream
partner
#NTconns
aPhM2a
%
Out
CV
GNG001 (M)1GABA3738.2%0.0
GNG035 (L)1GABA2736.0%0.0
GNG035 (R)1GABA2545.6%0.0
GNG014 (R)1ACh2335.1%0.0
GNG014 (L)1ACh2104.6%0.0
GNG172 (R)1ACh1793.9%0.0
GNG072 (R)1GABA120.52.6%0.0
GNG081 (R)1ACh117.52.6%0.0
GNG168 (R)1Glu1122.5%0.0
GNG099 (R)1GABA1062.3%0.0
GNG140 (R)1Glu103.52.3%0.0
aPhM2a5ACh982.1%0.8
GNG033 (R)1ACh922.0%0.0
GNG172 (L)1ACh88.51.9%0.0
GNG206 (R)1Glu841.8%0.0
GNG125 (R)1GABA741.6%0.0
GNG111 (R)1Glu731.6%0.0
GNG033 (L)1ACh731.6%0.0
GNG240 (L)1Glu70.51.5%0.0
GNG099 (L)1GABA65.51.4%0.0
GNG061 (R)1ACh64.51.4%0.0
GNG177 (R)1GABA61.51.3%0.0
GNG206 (L)1Glu58.51.3%0.0
GNG072 (L)1GABA571.2%0.0
GNG081 (L)1ACh561.2%0.0
GNG061 (L)1ACh53.51.2%0.0
GNG125 (L)1GABA471.0%0.0
GNG387 (R)2ACh471.0%0.1
GNG334 (R)2ACh46.51.0%0.1
GNG168 (L)1Glu44.51.0%0.0
GNG111 (L)1Glu41.50.9%0.0
GNG252 (R)1ACh41.50.9%0.0
GNG076 (R)1ACh410.9%0.0
GNG018 (R)1ACh380.8%0.0
GNG252 (L)1ACh36.50.8%0.0
GNG621 (R)2ACh340.7%0.3
GNG140 (L)1Glu33.50.7%0.0
GNG240 (R)1Glu330.7%0.0
GNG540 (L)15-HT30.50.7%0.0
GNG062 (R)1GABA28.50.6%0.0
GNG177 (L)1GABA280.6%0.0
GNG169 (R)1ACh25.50.6%0.0
GNG360 (R)1ACh24.50.5%0.0
GNG610 (R)4ACh24.50.5%0.7
GNG037 (R)1ACh22.50.5%0.0
GNG179 (R)1GABA220.5%0.0
GNG540 (R)15-HT21.50.5%0.0
GNG088 (R)1GABA20.50.4%0.0
GNG142 (R)1ACh200.4%0.0
GNG334 (L)1ACh190.4%0.0
GNG481 (R)2GABA190.4%0.2
aPhM110ACh180.4%0.8
GNG037 (L)1ACh170.4%0.0
GNG053 (R)1GABA16.50.4%0.0
GNG018 (L)1ACh14.50.3%0.0
GNG076 (L)1ACh140.3%0.0
GNG248 (R)1ACh13.50.3%0.0
MNx01 (L)3Glu13.50.3%0.4
GNG387 (L)2ACh130.3%0.4
GNG174 (R)1ACh12.50.3%0.0
GNG075 (L)1GABA120.3%0.0
GNG462 (R)1GABA120.3%0.0
MN5 (R)1unc11.50.3%0.0
GNG457 (L)1ACh11.50.3%0.0
GNG209 (R)1ACh100.2%0.0
GNG062 (L)1GABA9.50.2%0.0
GNG621 (L)2ACh9.50.2%0.8
GNG207 (L)1ACh9.50.2%0.0
GNG207 (R)1ACh90.2%0.0
GNG360 (L)1ACh90.2%0.0
GNG350 (L)2GABA90.2%0.1
GNG457 (R)1ACh8.50.2%0.0
MN11V (L)1ACh8.50.2%0.0
GNG080 (R)1Glu8.50.2%0.0
GNG053 (L)1GABA8.50.2%0.0
GNG298 (M)1GABA7.50.2%0.0
GNG200 (R)1ACh7.50.2%0.0
GNG065 (R)1ACh70.2%0.0
GNG040 (L)1ACh70.2%0.0
GNG169 (L)1ACh70.2%0.0
GNG179 (L)1GABA70.2%0.0
aPhM42ACh70.2%0.7
GNG024 (L)1GABA70.2%0.0
GNG039 (R)1GABA70.2%0.0
GNG609 (R)2ACh6.50.1%0.7
GNG088 (L)1GABA6.50.1%0.0
MN11D (R)2ACh6.50.1%0.1
GNG142 (L)1ACh60.1%0.0
GNG174 (L)1ACh60.1%0.0
GNG056 (R)15-HT60.1%0.0
GNG350 (R)1GABA60.1%0.0
GNG363 (L)2ACh60.1%0.2
GNG270 (R)1ACh60.1%0.0
aPhM34ACh60.1%0.7
aPhM54ACh60.1%0.6
GNG155 (R)1Glu5.50.1%0.0
GNG248 (L)1ACh5.50.1%0.0
GNG027 (R)1GABA5.50.1%0.0
GNG027 (L)1GABA50.1%0.0
GNG165 (R)2ACh50.1%0.8
GNG075 (R)1GABA50.1%0.0
GNG379 (R)2GABA50.1%0.2
GNG373 (R)1GABA50.1%0.0
GNG040 (R)1ACh50.1%0.0
DNg23 (R)1GABA50.1%0.0
GNG550 (R)15-HT4.50.1%0.0
GNG050 (R)1ACh4.50.1%0.0
GNG080 (L)1Glu4.50.1%0.0
GNG065 (L)1ACh4.50.1%0.0
GNG550 (L)15-HT40.1%0.0
GNG258 (R)1GABA3.50.1%0.0
GNG363 (R)1ACh3.50.1%0.0
GNG209 (L)1ACh3.50.1%0.0
MNx03 (R)1unc3.50.1%0.0
GNG244 (R)1unc3.50.1%0.0
GNG084 (R)1ACh30.1%0.0
GNG623 (R)1ACh30.1%0.0
GNG362 (R)1GABA30.1%0.0
GNG056 (L)15-HT30.1%0.0
GNG059 (R)1ACh30.1%0.0
MNx01 (R)1Glu30.1%0.0
GNG039 (L)1GABA30.1%0.0
GNG481 (L)2GABA30.1%0.0
GNG479 (R)1GABA2.50.1%0.0
GNG479 (L)1GABA2.50.1%0.0
GNG462 (L)1GABA2.50.1%0.0
GNG245 (L)1Glu20.0%0.0
GNG270 (L)1ACh20.0%0.0
MN10 (R)1unc20.0%0.0
GNG379 (L)2GABA20.0%0.5
GNG200 (L)1ACh20.0%0.0
GNG077 (R)1ACh20.0%0.0
GNG391 (R)1GABA20.0%0.0
GNG623 (L)1ACh20.0%0.0
GNG068 (L)1Glu20.0%0.0
GNG185 (R)1ACh20.0%0.0
M_lvPNm24 (R)1ACh20.0%0.0
GNG107 (R)1GABA20.0%0.0
aPhM2b2ACh20.0%0.5
GNG269 (R)3ACh20.0%0.4
MN12D (L)1unc1.50.0%0.0
AN10B009 (L)1ACh1.50.0%0.0
GNG019 (L)1ACh1.50.0%0.0
MNx02 (L)1unc1.50.0%0.0
GNG060 (L)1unc1.50.0%0.0
GNG622 (L)1ACh1.50.0%0.0
GNG068 (R)1Glu1.50.0%0.0
GNG050 (L)1ACh1.50.0%0.0
claw_tpGRN2ACh1.50.0%0.3
GNG610 (L)1ACh1.50.0%0.0
GNG373 (L)2GABA1.50.0%0.3
GNG024 (R)1GABA1.50.0%0.0
GNG513 (R)1ACh10.0%0.0
MNx05 (R)1unc10.0%0.0
MNx03 (L)1unc10.0%0.0
GNG467 (L)1ACh10.0%0.0
GNG494 (R)1ACh10.0%0.0
GNG077 (L)1ACh10.0%0.0
GNG083 (L)1GABA10.0%0.0
GNG155 (L)1Glu10.0%0.0
GNG465 (R)1ACh10.0%0.0
GNG258 (L)1GABA10.0%0.0
GNG185 (L)1ACh10.0%0.0
GNG219 (L)1GABA10.0%0.0
GNG173 (L)1GABA10.0%0.0
GNG143 (R)1ACh10.0%0.0
GNG244 (L)1unc0.50.0%0.0
GNG054 (R)1GABA0.50.0%0.0
GNG078 (L)1GABA0.50.0%0.0
GNG238 (R)1GABA0.50.0%0.0
GNG170 (L)1ACh0.50.0%0.0
GNG357 (L)1GABA0.50.0%0.0
GNG366 (R)1GABA0.50.0%0.0
GNG394 (R)1GABA0.50.0%0.0
GNG269 (L)1ACh0.50.0%0.0
GNG170 (R)1ACh0.50.0%0.0
GNG079 (R)1ACh0.50.0%0.0
GNG357 (R)1GABA0.50.0%0.0
PRW044 (R)1unc0.50.0%0.0
GNG588 (R)1ACh0.50.0%0.0
GNG054 (L)1GABA0.50.0%0.0
GNG391 (L)1GABA0.50.0%0.0
GNG484 (R)1ACh0.50.0%0.0
DNc02 (L)1unc0.50.0%0.0
GNG109 (R)1GABA0.50.0%0.0
MN11V (R)1ACh0.50.0%0.0
GNG362 (L)1GABA0.50.0%0.0
GNG592 (R)1Glu0.50.0%0.0
GNG224 (R)1ACh0.50.0%0.0
GNG471 (L)1GABA0.50.0%0.0
GNG6441unc0.50.0%0.0
GNG060 (R)1unc0.50.0%0.0
TPMN11ACh0.50.0%0.0
PhG21ACh0.50.0%0.0
TPMN21ACh0.50.0%0.0
GNG608 (R)1GABA0.50.0%0.0
GNG406 (R)1ACh0.50.0%0.0
GNG407 (R)1ACh0.50.0%0.0
GNG620 (R)1ACh0.50.0%0.0
GNG605 (L)1GABA0.50.0%0.0
MNx02 (R)1unc0.50.0%0.0
GNG219 (R)1GABA0.50.0%0.0
GNG165 (L)1ACh0.50.0%0.0
GNG067 (R)1unc0.50.0%0.0
GNG213 (L)1Glu0.50.0%0.0
GNG079 (L)1ACh0.50.0%0.0
GNG510 (L)1ACh0.50.0%0.0
GNG097 (R)1Glu0.50.0%0.0
GNG019 (R)1ACh0.50.0%0.0
GNG123 (R)1ACh0.50.0%0.0
GNG026 (L)1GABA0.50.0%0.0
GNG043 (R)1HA0.50.0%0.0
GNG043 (L)1HA0.50.0%0.0
DNg48 (L)1ACh0.50.0%0.0
GNG116 (R)1GABA0.50.0%0.0
GNG164 (R)1Glu0.50.0%0.0
GNG253 (R)1GABA0.50.0%0.0
GNG702m (R)1unc0.50.0%0.0