Male CNS – Cell Type Explorer

aMe2(L)

AKA: cM04 (Flywire, CTE-FAFB)

8
Total Neurons
Right: 4 | Left: 4
log ratio : 0.00
2,553
Total Synapses
Post: 1,341 | Pre: 1,212
log ratio : -0.15
638.2
Mean Synapses
Post: 335.2 | Pre: 303
log ratio : -0.15
Glu(82.0% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
-
-
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
-4-0.51.221.22---29
-1294631.811---73.8
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
------50-
--------
AME
54
88.2
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
128.2
46

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
Optic-unspecified(L)41330.8%0.2047339.0%
AME(L)21616.1%0.7135329.1%
CentralBrain-unspecified31223.3%-0.8417414.4%
ME(L)997.4%1.0320216.7%
PLP(L)20115.0%-4.33100.8%
LO(L)1007.5%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
aMe2
%
In
CV
aMe5 (L)20ACh52.816.3%0.7
MeLo1 (L)25ACh257.7%1.2
MeVPMe12 (R)2ACh22.87.0%0.0
MeVPaMe1 (R)1ACh216.5%0.0
MeVPaMe1 (L)1ACh15.24.7%0.0
aMe8 (L)2unc15.24.7%0.1
LoVP96 (L)1Glu13.24.1%0.0
aMe12 (L)4ACh10.23.2%0.4
aMe6a (L)1ACh6.82.1%0.0
MeVPMe11 (R)1Glu6.82.1%0.0
aMe4 (L)9ACh6.82.1%0.6
OA-AL2i3 (L)2OA6.52.0%0.1
Cm21 (L)3GABA6.21.9%1.0
aMe2 (L)4Glu5.21.6%0.2
MeLo3b (L)10ACh4.51.4%0.5
aMe22 (L)1Glu4.21.3%0.0
LT58 (L)1Glu4.21.3%0.0
MeLo6 (L)13ACh4.21.3%0.6
MeVP38 (L)1ACh3.21.0%0.0
MeVC20 (L)2Glu3.21.0%0.5
Tm37 (L)4Glu3.21.0%0.5
aMe12 (R)2ACh3.21.0%0.4
aMe23 (L)1Glu30.9%0.0
DNpe053 (L)1ACh30.9%0.0
LoVCLo3 (R)1OA30.9%0.0
DN1a (L)2Glu2.80.9%0.3
HBeyelet (L)3HA2.80.9%0.1
MeLo7 (L)1ACh2.50.8%0.0
aMe30 (L)2Glu2.50.8%0.6
aMe1 (L)2GABA2.50.8%0.2
MeVP29 (L)1ACh2.20.7%0.0
LoVP62 (L)2ACh2.20.7%0.3
MeVPMe12 (L)2ACh2.20.7%0.3
MeVP14 (L)6ACh2.20.7%0.5
OCG02c (R)2ACh2.20.7%0.3
MeVPMe3 (R)1Glu20.6%0.0
aMe6b (L)1ACh1.80.5%0.0
aMe13 (L)1ACh1.80.5%0.0
Mi15 (L)4ACh1.80.5%0.5
LoVCLo3 (L)1OA1.50.5%0.0
OCG02c (L)2ACh1.50.5%0.3
MeVC22 (L)2Glu1.50.5%0.7
TmY10 (L)3ACh1.50.5%0.0
LoVC23 (R)2GABA1.50.5%0.0
l-LNv (L)3unc1.50.5%0.7
SLP250 (L)1Glu1.20.4%0.0
DNpe053 (R)1ACh1.20.4%0.0
DNp27 (L)1ACh1.20.4%0.0
MeVC21 (L)3Glu1.20.4%0.3
Mi10 (L)3ACh1.20.4%0.3
MeVPaMe2 (R)1Glu1.20.4%0.0
aMe6c (L)1Glu10.3%0.0
MeVP7 (L)2ACh10.3%0.5
MeVP1 (L)4ACh10.3%0.0
Cm15 (L)1GABA0.80.2%0.0
aMe10 (L)1ACh0.80.2%0.0
MeVP3 (L)2ACh0.80.2%0.3
aMe24 (L)1Glu0.80.2%0.0
LoVP9 (L)3ACh0.80.2%0.0
aMe10 (R)2ACh0.80.2%0.3
Cm11c (L)3ACh0.80.2%0.0
aMe26 (L)1ACh0.50.2%0.0
LT43 (L)1GABA0.50.2%0.0
MeVP5 (L)1ACh0.50.2%0.0
aMe9 (R)1ACh0.50.2%0.0
MeVC10 (R)1ACh0.50.2%0.0
Lat2 (L)1unc0.50.2%0.0
5thsLNv_LNd6 (L)1ACh0.50.2%0.0
Lat3 (L)2unc0.50.2%0.0
l-LNv (R)2unc0.50.2%0.0
aMe3 (L)1Glu0.50.2%0.0
OA-VUMa6 (M)1OA0.50.2%0.0
MeTu3b (L)1ACh0.20.1%0.0
Cm28 (L)1Glu0.20.1%0.0
Li20 (L)1Glu0.20.1%0.0
LC10e (L)1ACh0.20.1%0.0
LO_unclear (L)1Glu0.20.1%0.0
Lat1 (L)1unc0.20.1%0.0
LoVP46 (L)1Glu0.20.1%0.0
MeVPMe6 (R)1Glu0.20.1%0.0
LoVCLo2 (L)1unc0.20.1%0.0
Li23 (L)1ACh0.20.1%0.0
MeVC23 (L)1Glu0.20.1%0.0
Cm20 (L)1GABA0.20.1%0.0
MeVC24 (L)1Glu0.20.1%0.0
Cm23 (L)1Glu0.20.1%0.0
MeTu3c (L)1ACh0.20.1%0.0
LoVP38 (L)1Glu0.20.1%0.0
LoVP90c (L)1ACh0.20.1%0.0
aMe17e (L)1Glu0.20.1%0.0
Cm3 (L)1GABA0.20.1%0.0
Tm12 (L)1ACh0.20.1%0.0
CL125 (L)1Glu0.20.1%0.0
Tm30 (L)1GABA0.20.1%0.0
MeTu1 (L)1ACh0.20.1%0.0
MeVP40 (L)1ACh0.20.1%0.0
MeVP4 (L)1ACh0.20.1%0.0
Dm16 (L)1Glu0.20.1%0.0
Cm11d (L)1ACh0.20.1%0.0
Cm1 (L)1ACh0.20.1%0.0
AOTU058 (L)1GABA0.20.1%0.0
Cm-DRA (L)1ACh0.20.1%0.0
LoVC18 (L)1DA0.20.1%0.0
LPT54 (L)1ACh0.20.1%0.0

Outputs

downstream
partner
#NTconns
aMe2
%
Out
CV
l-LNv (L)4unc264.531.8%0.2
5thsLNv_LNd6 (L)2ACh68.88.3%0.1
OA-AL2i3 (L)2OA485.8%0.1
aMe4 (L)10ACh36.24.4%0.4
MeVPMe12 (L)2ACh35.54.3%0.2
aMe26 (L)3ACh344.1%0.2
Mi18 (L)8GABA323.8%0.9
aMe5 (L)13ACh303.6%1.3
aMe23 (L)1Glu21.82.6%0.0
aMe1 (L)2GABA18.82.3%0.1
Tm5c (L)16Glu17.82.1%0.5
Mi10 (L)9ACh11.81.4%0.7
aMe10 (L)1ACh11.51.4%0.0
aMe12 (L)4ACh11.51.4%0.4
Cm35 (L)1GABA10.21.2%0.0
aMe3 (L)1Glu9.21.1%0.0
Cm8 (L)4GABA70.8%0.7
SLP250 (L)1Glu6.80.8%0.0
Tm38 (L)4ACh5.50.7%0.7
MeLo7 (L)14ACh5.50.7%0.3
aMe2 (L)4Glu5.20.6%0.2
MeVPMe13 (L)1ACh50.6%0.0
Cm34 (L)1Glu50.6%0.0
Lat1 (L)4unc50.6%0.7
Cm1 (L)7ACh50.6%0.4
MeVP1 (L)8ACh4.80.6%0.6
Tm39 (L)9ACh4.50.5%0.5
MeVP29 (L)1ACh4.20.5%0.0
SLP249 (L)2Glu4.20.5%0.3
MeVC20 (L)2Glu4.20.5%0.2
MeVPaMe1 (L)1ACh40.5%0.0
Lat3 (L)4unc3.80.5%0.5
aMe30 (L)2Glu3.50.4%0.6
MeVPaMe1 (R)1ACh3.20.4%0.0
aMe15 (L)1ACh3.20.4%0.0
Tm36 (L)4ACh3.20.4%0.3
MeVC22 (L)2Glu3.20.4%0.1
Lawf1 (L)5ACh3.20.4%0.5
MeVPMe12 (R)2ACh3.20.4%0.1
MeVP11 (L)2ACh2.80.3%0.1
aMe8 (L)2unc2.80.3%0.1
TmY18 (L)5ACh2.80.3%0.5
CL125 (L)2Glu2.20.3%0.3
l-LNv (R)4unc20.2%0.4
MeLo1 (L)7ACh20.2%0.3
MeVPaMe2 (R)1Glu1.80.2%0.0
aMe24 (L)1Glu1.80.2%0.0
aMe17b (L)2GABA1.50.2%0.3
MeVP7 (L)3ACh1.50.2%0.7
aMe13 (L)1ACh1.50.2%0.0
DNpe053 (L)1ACh1.50.2%0.0
Cm23 (L)4Glu1.50.2%0.6
TmY17 (L)4ACh1.50.2%0.6
Cm3 (L)5GABA1.50.2%0.3
MeLo13 (L)1Glu1.20.2%0.0
MeVP63 (L)1GABA1.20.2%0.0
MeTu4f (L)1ACh10.1%0.0
Cm26 (L)2Glu10.1%0.5
WED040_a (L)2Glu10.1%0.5
Cm15 (L)2GABA10.1%0.5
Tm12 (L)3ACh10.1%0.4
DN1a (L)1Glu10.1%0.0
Tm5b (L)3ACh10.1%0.4
aMe6b (L)1ACh0.80.1%0.0
MeVPaMe2 (L)1Glu0.80.1%0.0
MeVCMe1 (R)1ACh0.80.1%0.0
Dm2 (L)1ACh0.80.1%0.0
Lat2 (L)2unc0.80.1%0.3
MeVP40 (L)1ACh0.80.1%0.0
ME_unclear (L)1Glu0.80.1%0.0
MeLo3a (L)2ACh0.80.1%0.3
Tm37 (L)2Glu0.80.1%0.3
DNp27 (L)1ACh0.80.1%0.0
LoVP96 (L)1Glu0.80.1%0.0
Cm11d (L)3ACh0.80.1%0.0
LoVC23 (R)1GABA0.50.1%0.0
MeVPMe11 (L)1Glu0.50.1%0.0
aMe9 (L)1ACh0.50.1%0.0
aMe6c (L)1Glu0.50.1%0.0
MeVPMe4 (L)1Glu0.50.1%0.0
MeVPMe11 (R)1Glu0.50.1%0.0
aMe17e (L)1Glu0.50.1%0.0
DNp27 (R)1ACh0.50.1%0.0
Cm11b (L)1ACh0.50.1%0.0
Cm11c (L)1ACh0.50.1%0.0
LT58 (L)1Glu0.50.1%0.0
OA-AL2i4 (L)1OA0.50.1%0.0
Tm20 (L)1ACh0.50.1%0.0
MeVP4 (L)1ACh0.50.1%0.0
Cm4 (L)1Glu0.50.1%0.0
LO_unclear (L)1Glu0.50.1%0.0
MeLo2 (L)2ACh0.50.1%0.0
Pm13 (L)1Glu0.50.1%0.0
MeVP3 (L)2ACh0.50.1%0.0
Mi15 (L)2ACh0.50.1%0.0
MeVC24 (L)1Glu0.50.1%0.0
MeVC21 (L)2Glu0.50.1%0.0
Tm31 (L)2GABA0.50.1%0.0
MeVP14 (L)2ACh0.50.1%0.0
MeVP2 (L)2ACh0.50.1%0.0
aMe_TBD1 (L)1GABA0.50.1%0.0
HBeyelet (L)1HA0.20.0%0.0
LC33 (L)1Glu0.20.0%0.0
MeLo9 (L)1Glu0.20.0%0.0
AOTU056 (L)1GABA0.20.0%0.0
LC10a (L)1ACh0.20.0%0.0
Cm24 (L)1Glu0.20.0%0.0
MeVPLo1 (L)1Glu0.20.0%0.0
MeVP52 (L)1ACh0.20.0%0.0
aMe17c (L)1Glu0.20.0%0.0
Cm17 (L)1GABA0.20.0%0.0
LoVP_unclear (L)1ACh0.20.0%0.0
LoVP89 (L)1ACh0.20.0%0.0
MeLo6 (L)1ACh0.20.0%0.0
LPLC2 (L)1ACh0.20.0%0.0
LoVP39 (L)1ACh0.20.0%0.0
MeVP59 (L)1ACh0.20.0%0.0
MeVPOL1 (L)1ACh0.20.0%0.0
T2 (L)1ACh0.20.0%0.0
MeVC23 (L)1Glu0.20.0%0.0
aMe22 (L)1Glu0.20.0%0.0
Tm3 (L)1ACh0.20.0%0.0
aMe_unclear (L)1Glu0.20.0%0.0
MeVP8 (L)1ACh0.20.0%0.0
Cm21 (L)1GABA0.20.0%0.0
Pm12 (L)1GABA0.20.0%0.0
OLVC4 (R)1unc0.20.0%0.0
MeVC10 (R)1ACh0.20.0%0.0
MeVPMe3 (R)1Glu0.20.0%0.0
aMe6a (L)1ACh0.20.0%0.0
MeTu1 (L)1ACh0.20.0%0.0
OCG02c (L)1ACh0.20.0%0.0
MeVP45 (L)1ACh0.20.0%0.0
MeVPMe4 (R)1Glu0.20.0%0.0
MeVCMe1 (L)1ACh0.20.0%0.0