Male CNS – Cell Type Explorer

aMe22(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,799
Total Synapses
Post: 956 | Pre: 843
log ratio : -0.18
1,799
Mean Synapses
Post: 956 | Pre: 843
log ratio : -0.18
Glu(75.8% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
-
-
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
------23--5
------39---39
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
--------
--------
AME
115
141
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
822
655

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
PLP(R)51153.5%-0.0648958.0%
AME(R)11512.0%0.2914116.7%
CentralBrain-unspecified11311.8%-0.87627.4%
SCL(R)11812.3%-1.53414.9%
SLP(R)677.0%-0.57455.3%
ME(R)50.5%2.96394.6%
ICL(R)101.0%0.77172.0%
Optic-unspecified(R)141.5%-0.8180.9%
SMP(R)30.3%-inf00.0%
PED(R)00.0%inf10.1%

Connectivity

Inputs

upstream
partner
#NTconns
aMe22
%
In
CV
aMe12 (R)2ACh27330.0%0.0
MeVP38 (R)1ACh11412.5%0.0
aMe12 (L)4ACh909.9%0.1
5thsLNv_LNd6 (R)2ACh667.3%0.2
AVLP594 (R)1unc293.2%0.0
MeVP12 (R)10ACh283.1%0.8
LPT51 (R)2Glu262.9%0.6
AVLP594 (L)1unc252.7%0.0
MeVP39 (R)1GABA192.1%0.0
MeVC23 (R)1Glu192.1%0.0
MeLo1 (R)7ACh141.5%0.5
OA-VUMa3 (M)2OA121.3%0.8
LHPV6f5 (R)3ACh111.2%0.6
MeVP14 (R)6ACh111.2%0.6
LoVP96 (R)1Glu70.8%0.0
MeVPaMe1 (L)1ACh70.8%0.0
OCG02c (L)2ACh60.7%0.0
LoVP66 (R)1ACh50.5%0.0
aMe1 (R)2GABA50.5%0.2
LoVP73 (R)1ACh40.4%0.0
MeVPMe4 (L)1Glu40.4%0.0
MeVPMe11 (L)1Glu40.4%0.0
aMe26 (R)2ACh40.4%0.5
MeVPLo2 (L)3ACh40.4%0.4
MeVPLo2 (R)3ACh40.4%0.4
DN1a (R)1Glu30.3%0.0
OA-VPM4 (R)1OA30.3%0.0
OA-AL2i4 (R)1OA30.3%0.0
LoVC23 (L)2GABA30.3%0.3
aMe8 (R)2unc30.3%0.3
aMe30 (R)2Glu30.3%0.3
aMe5 (R)3ACh30.3%0.0
CL255 (R)1ACh20.2%0.0
LHAV2g5 (R)1ACh20.2%0.0
aMe6b (R)1ACh20.2%0.0
CB3140 (L)1ACh20.2%0.0
SLP321 (R)1ACh20.2%0.0
5thsLNv_LNd6 (L)1ACh20.2%0.0
aMe3 (R)1Glu20.2%0.0
SLP003 (R)1GABA20.2%0.0
LPT54 (R)1ACh20.2%0.0
LoVCLo3 (L)1OA20.2%0.0
DNg30 (R)15-HT20.2%0.0
MeVP15 (R)2ACh20.2%0.0
aMe17c (R)2Glu20.2%0.0
OA-AL2i3 (R)2OA20.2%0.0
ATL019 (R)1ACh10.1%0.0
SMP459 (R)1ACh10.1%0.0
CL063 (R)1GABA10.1%0.0
PS359 (L)1ACh10.1%0.0
CL356 (R)1ACh10.1%0.0
CL357 (L)1unc10.1%0.0
PLP199 (R)1GABA10.1%0.0
CB3080 (R)1Glu10.1%0.0
CB2720 (R)1ACh10.1%0.0
CB1368 (R)1Glu10.1%0.0
Cm11a (R)1ACh10.1%0.0
CB1011 (R)1Glu10.1%0.0
Cm20 (R)1GABA10.1%0.0
SLP267 (R)1Glu10.1%0.0
Tm38 (R)1ACh10.1%0.0
SLP266 (R)1Glu10.1%0.0
SMP222 (R)1Glu10.1%0.0
CB3118 (R)1Glu10.1%0.0
MeVP11 (R)1ACh10.1%0.0
CB3249 (R)1Glu10.1%0.0
MeTu3b (R)1ACh10.1%0.0
PLP_TBD1 (R)1Glu10.1%0.0
CL101 (R)1ACh10.1%0.0
Cm24 (R)1Glu10.1%0.0
PLP085 (R)1GABA10.1%0.0
SMP284_b (R)1Glu10.1%0.0
AVLP187 (R)1ACh10.1%0.0
LoVP38 (R)1Glu10.1%0.0
OA-ASM2 (R)1unc10.1%0.0
SLP098 (R)1Glu10.1%0.0
aMe23 (R)1Glu10.1%0.0
SMP472 (R)1ACh10.1%0.0
CL086_a (R)1ACh10.1%0.0
SLP368 (L)1ACh10.1%0.0
PLP258 (R)1Glu10.1%0.0
MeVP40 (R)1ACh10.1%0.0
CL317 (R)1Glu10.1%0.0
MeVP63 (R)1GABA10.1%0.0
aMe13 (L)1ACh10.1%0.0
aMe10 (L)1ACh10.1%0.0
SLP360_a (R)1ACh10.1%0.0
CL317 (L)1Glu10.1%0.0
PLP080 (R)1Glu10.1%0.0
MeVPaMe2 (L)1Glu10.1%0.0
SLP080 (R)1ACh10.1%0.0
PLP144 (R)1GABA10.1%0.0
aMe9 (R)1ACh10.1%0.0
5-HTPMPV01 (L)15-HT10.1%0.0
CB0510 (R)1Glu10.1%0.0
LHPV5l1 (R)1ACh10.1%0.0
MeVP32 (R)1ACh10.1%0.0
MeVC24 (R)1Glu10.1%0.0
aMe9 (L)1ACh10.1%0.0
MeVC20 (R)1Glu10.1%0.0
SLP304 (R)1unc10.1%0.0
MeVP43 (R)1ACh10.1%0.0
MeVPaMe1 (R)1ACh10.1%0.0
SLP438 (R)1unc10.1%0.0
MeVC3 (L)1ACh10.1%0.0
MeVC22 (R)1Glu10.1%0.0
l-LNv (R)1unc10.1%0.0
Mi19 (R)1unc10.1%0.0
MeVPMe3 (L)1Glu10.1%0.0
MeVP52 (R)1ACh10.1%0.0
MeVP47 (R)1ACh10.1%0.0
MeVPOL1 (R)1ACh10.1%0.0
DNpe053 (L)1ACh10.1%0.0
MeVPMe13 (L)1ACh10.1%0.0
WED092 (L)1ACh10.1%0.0
LoVCLo3 (R)1OA10.1%0.0

Outputs

downstream
partner
#NTconns
aMe22
%
Out
CV
aMe8 (R)2unc27311.9%0.1
MeVP38 (R)1ACh26911.7%0.0
5thsLNv_LNd6 (R)2ACh2229.7%0.1
aMe20 (R)1ACh1968.5%0.0
OA-AL2i4 (R)1OA793.4%0.0
AOTU056 (R)4GABA602.6%0.7
MeVP29 (R)1ACh492.1%0.0
aMe12 (R)2ACh492.1%0.3
aMe1 (R)2GABA462.0%0.4
AVLP594 (R)1unc431.9%0.0
aMe13 (R)1ACh401.7%0.0
AVLP594 (L)1unc401.7%0.0
LoVC19 (R)2ACh351.5%0.1
aMe2 (R)4Glu341.5%0.5
LHPV6f5 (R)3ACh331.4%0.3
CB3001 (R)3ACh331.4%0.5
MeVP14 (R)6ACh291.3%0.5
aMe5 (R)9ACh271.2%0.8
aMe12 (L)4ACh231.0%0.5
MeVC20 (R)2Glu221.0%0.1
Cm6 (R)5GABA221.0%0.6
SLP256 (R)1Glu210.9%0.0
MeVP39 (R)1GABA200.9%0.0
CL327 (R)1ACh170.7%0.0
Lat3 (R)3unc170.7%0.7
SMP229 (R)2Glu170.7%0.2
MeVP16 (R)3Glu170.7%0.7
CL356 (R)2ACh160.7%0.4
PLP069 (R)2Glu160.7%0.2
MeLo1 (R)5ACh160.7%0.5
SLP456 (R)1ACh140.6%0.0
SLP230 (R)1ACh130.6%0.0
aMe3 (R)1Glu120.5%0.0
LoVP96 (R)1Glu120.5%0.0
aMe4 (R)6ACh120.5%0.4
MeVP50 (R)1ACh110.5%0.0
SMP529 (R)1ACh100.4%0.0
IB071 (R)1ACh90.4%0.0
MeVP40 (R)1ACh90.4%0.0
LoVP38 (R)2Glu90.4%0.8
CB3080 (R)1Glu80.3%0.0
CB0937 (R)2Glu80.3%0.5
PLP149 (R)2GABA80.3%0.2
aMe26 (R)3ACh80.3%0.4
aMe23 (R)1Glu70.3%0.0
SLP368 (L)1ACh70.3%0.0
PLP130 (R)1ACh70.3%0.0
Tm34 (R)1Glu60.3%0.0
SMP331 (R)1ACh60.3%0.0
LoVP79 (R)1ACh60.3%0.0
MeVC23 (R)1Glu60.3%0.0
CB3360 (R)2Glu60.3%0.7
OCG02c (L)2ACh60.3%0.3
CL086_a (R)2ACh60.3%0.3
OA-VUMa3 (M)2OA60.3%0.3
CL234 (R)2Glu60.3%0.0
SMP217 (R)1Glu50.2%0.0
MeVP45 (R)1ACh50.2%0.0
LoVCLo2 (L)1unc50.2%0.0
LoVCLo3 (R)1OA50.2%0.0
SLP267 (R)3Glu50.2%0.6
AOTU058 (R)2GABA50.2%0.2
CB1791 (R)1Glu40.2%0.0
Tm16 (R)1ACh40.2%0.0
aMe6b (R)1ACh40.2%0.0
SMP579 (R)1unc40.2%0.0
MeVP33 (R)1ACh40.2%0.0
aMe30 (R)1Glu40.2%0.0
LT58 (R)1Glu40.2%0.0
MeVPMe11 (R)1Glu40.2%0.0
aMe17c (R)1Glu40.2%0.0
SIP032 (R)2ACh40.2%0.5
CB3479 (R)2ACh40.2%0.5
LT43 (R)2GABA40.2%0.5
Tm38 (R)3ACh40.2%0.4
CL357 (L)1unc30.1%0.0
PLP199 (R)1GABA30.1%0.0
Tm4 (R)1ACh30.1%0.0
CB3249 (R)1Glu30.1%0.0
FB8B (R)1Glu30.1%0.0
SLP098 (R)1Glu30.1%0.0
CB3676 (R)1Glu30.1%0.0
SMP583 (R)1Glu30.1%0.0
LHAV3q1 (R)1ACh30.1%0.0
LoVC23 (L)1GABA30.1%0.0
CL070_b (R)1ACh30.1%0.0
5-HTPMPV01 (L)15-HT30.1%0.0
LHPV9b1 (R)1Glu30.1%0.0
MeVPaMe1 (R)1ACh30.1%0.0
MeVP28 (R)1ACh30.1%0.0
MeVPaMe2 (R)1Glu30.1%0.0
MeVPLo1 (R)1Glu30.1%0.0
LoVP100 (R)1ACh30.1%0.0
MeVPMe11 (L)1Glu30.1%0.0
LoVCLo3 (L)1OA30.1%0.0
DNg30 (R)15-HT30.1%0.0
CB4072 (R)2ACh30.1%0.3
TmY10 (R)2ACh30.1%0.3
LHAV3e2 (R)2ACh30.1%0.3
CL063 (R)1GABA20.1%0.0
PLP129 (R)1GABA20.1%0.0
Mi2 (R)1Glu20.1%0.0
MeVPLo2 (L)1ACh20.1%0.0
CB1059 (R)1Glu20.1%0.0
Tm5Y (R)1ACh20.1%0.0
MeVP7 (R)1ACh20.1%0.0
SLP363 (R)1Glu20.1%0.0
SLP360_d (R)1ACh20.1%0.0
CL012 (R)1ACh20.1%0.0
LHPD1b1 (R)1Glu20.1%0.0
MeVPLo2 (R)1ACh20.1%0.0
aMe24 (R)1Glu20.1%0.0
KCg-s1 (R)1DA20.1%0.0
SLP270 (R)1ACh20.1%0.0
SLP076 (R)1Glu20.1%0.0
MeVP21 (R)1ACh20.1%0.0
MeVP42 (R)1ACh20.1%0.0
PLP231 (R)1ACh20.1%0.0
AVLP097 (R)1ACh20.1%0.0
5thsLNv_LNd6 (L)1ACh20.1%0.0
LoVP73 (R)1ACh20.1%0.0
MeVC24 (R)1Glu20.1%0.0
CL157 (R)1ACh20.1%0.0
OA-AL2i3 (R)1OA20.1%0.0
SMP459 (R)2ACh20.1%0.0
LHPV6k2 (R)2Glu20.1%0.0
MeVP12 (R)2ACh20.1%0.0
KCg-d (R)2DA20.1%0.0
OCG02c (R)2ACh20.1%0.0
MeVP20 (R)2Glu20.1%0.0
DN1a (R)2Glu20.1%0.0
LT68 (R)2Glu20.1%0.0
CB1551 (R)1ACh10.0%0.0
SMP527 (R)1ACh10.0%0.0
LoVP28 (R)1ACh10.0%0.0
aMe17a (R)1unc10.0%0.0
CB1984 (R)1Glu10.0%0.0
Tm33 (R)1ACh10.0%0.0
SMP216 (R)1Glu10.0%0.0
SMP232 (R)1Glu10.0%0.0
SMP228 (L)1Glu10.0%0.0
SLP295 (R)1Glu10.0%0.0
WED143_c (R)1ACh10.0%0.0
CL086_b (R)1ACh10.0%0.0
LoVP3 (R)1Glu10.0%0.0
LC28 (R)1ACh10.0%0.0
CL283_a (R)1Glu10.0%0.0
LoVP5 (R)1ACh10.0%0.0
SMP222 (R)1Glu10.0%0.0
MeLo7 (R)1ACh10.0%0.0
CB3118 (R)1Glu10.0%0.0
CB1699 (R)1Glu10.0%0.0
MeVP15 (R)1ACh10.0%0.0
SLP064 (R)1Glu10.0%0.0
SMP022 (R)1Glu10.0%0.0
M_lvPNm37 (R)1ACh10.0%0.0
MeVP3 (R)1ACh10.0%0.0
CB2343 (R)1Glu10.0%0.0
Cm12 (R)1GABA10.0%0.0
SLP082 (R)1Glu10.0%0.0
SMP378 (R)1ACh10.0%0.0
SLP153 (R)1ACh10.0%0.0
CB4127 (R)1unc10.0%0.0
Lat1 (R)1unc10.0%0.0
AVLP037 (R)1ACh10.0%0.0
CB0656 (R)1ACh10.0%0.0
CL086_e (R)1ACh10.0%0.0
LHAD2c3 (R)1ACh10.0%0.0
LoVP62 (R)1ACh10.0%0.0
CL201 (R)1ACh10.0%0.0
SMP200 (R)1Glu10.0%0.0
Lat2 (R)1unc10.0%0.0
aMe10 (R)1ACh10.0%0.0
Lat5 (R)1unc10.0%0.0
PLP258 (R)1Glu10.0%0.0
SLP249 (R)1Glu10.0%0.0
SLP321 (R)1ACh10.0%0.0
CB0645 (R)1ACh10.0%0.0
MeVP27 (R)1ACh10.0%0.0
SMP044 (R)1Glu10.0%0.0
SMP495_a (R)1Glu10.0%0.0
SLP304 (R)1unc10.0%0.0
LoVP46 (R)1Glu10.0%0.0
CL317 (L)1Glu10.0%0.0
LPT51 (R)1Glu10.0%0.0
PLP080 (R)1Glu10.0%0.0
SLP080 (R)1ACh10.0%0.0
aMe9 (R)1ACh10.0%0.0
CB0510 (R)1Glu10.0%0.0
LHPV8a1 (R)1ACh10.0%0.0
CL022_c (R)1ACh10.0%0.0
LHAV2d1 (R)1ACh10.0%0.0
OLVC4 (R)1unc10.0%0.0
SLP066 (R)1Glu10.0%0.0
SLP250 (R)1Glu10.0%0.0
MeVPMe7 (L)1Glu10.0%0.0
aMe17b (R)1GABA10.0%0.0
DNpe043 (R)1ACh10.0%0.0
MeVP43 (R)1ACh10.0%0.0
LHPV3c1 (R)1ACh10.0%0.0
MeVC21 (R)1Glu10.0%0.0
MeVPaMe1 (L)1ACh10.0%0.0
ANXXX127 (R)1ACh10.0%0.0
MeVC22 (R)1Glu10.0%0.0
MeVPMe3 (L)1Glu10.0%0.0
LoVC18 (R)1DA10.0%0.0
MeVP51 (R)1Glu10.0%0.0
CL365 (R)1unc10.0%0.0
MeVPMe12 (R)1ACh10.0%0.0
MeVC27 (R)1unc10.0%0.0
DNp29 (R)1unc10.0%0.0
DNp27 (R)1ACh10.0%0.0
AstA1 (L)1GABA10.0%0.0