Male CNS – Cell Type Explorer

WED100(R)[PC]

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
3,231
Total Synapses
Post: 2,628 | Pre: 603
log ratio : -2.12
1,615.5
Mean Synapses
Post: 1,314 | Pre: 301.5
log ratio : -2.12
Glu(70.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AMMC(R)1,23246.9%-3.5710417.2%
WED(R)46217.6%-0.3137361.9%
SPS(R)37814.4%-4.47172.8%
CentralBrain-unspecified2489.4%-2.17559.1%
SAD1044.0%-1.57355.8%
IPS(R)1023.9%-3.6781.3%
IB813.1%-3.1791.5%
CAN(R)160.6%-3.0020.3%
GNG50.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
WED100
%
In
CV
JO-C/D/E42ACh18317.9%0.9
DNpe014 (R)2ACh444.3%0.1
CB1012 (L)3Glu353.4%0.3
WED143_a (L)4ACh34.53.4%0.2
CB3673 (R)1ACh252.4%0.0
AN06B090 (L)1GABA242.4%0.0
AMMC028 (R)2GABA242.4%0.3
LoVP101 (R)1ACh22.52.2%0.0
MeVPMe5 (R)2Glu222.2%0.4
M_lv2PN9t49_b (R)1GABA19.51.9%0.0
WED165 (R)1ACh19.51.9%0.0
AOTU023 (R)1ACh18.51.8%0.0
SAD110 (R)2GABA171.7%0.4
PS280 (L)1Glu161.6%0.0
MeVP54 (L)2Glu161.6%0.8
MeVP55 (L)2Glu15.51.5%0.1
WED143_b (L)2ACh141.4%0.0
AMMC026 (R)5GABA141.4%0.4
SAD001 (R)1ACh13.51.3%0.0
MeVPMe5 (L)4Glu13.51.3%0.6
SAD112_c (R)1GABA12.51.2%0.0
AOTU023 (L)1ACh121.2%0.0
PS314 (R)1ACh121.2%0.0
WED143_a (R)4ACh11.51.1%0.6
PS265 (R)1ACh10.51.0%0.0
AMMC006 (L)4Glu101.0%0.7
CB3437 (R)1ACh9.50.9%0.0
WED143_c (L)4ACh9.50.9%0.2
CB0228 (L)1Glu90.9%0.0
PS282 (L)4Glu90.9%1.0
PS279 (L)2Glu90.9%0.1
WED098 (R)3Glu90.9%0.7
SAD004 (R)5ACh90.9%0.7
MeVP55 (R)2Glu90.9%0.2
SAD112_a (R)1GABA80.8%0.0
SAD112_b (R)1GABA80.8%0.0
CB3320 (R)2GABA80.8%0.8
SAD077 (R)2Glu70.7%0.6
WEDPN8C (R)2ACh70.7%0.7
MeVP9 (R)3ACh70.7%0.6
AMMC012 (L)1ACh6.50.6%0.0
AMMC015 (R)3GABA6.50.6%0.4
SAD079 (R)1Glu60.6%0.0
LAL156_a (L)1ACh60.6%0.0
OCG01e (R)1ACh5.50.5%0.0
OCG01d (L)1ACh50.5%0.0
CB1094 (L)2Glu50.5%0.0
WED083 (L)1GABA50.5%0.0
AMMC006 (R)3Glu4.50.4%0.3
WED082 (L)2GABA4.50.4%0.3
WED084 (L)1GABA40.4%0.0
AMMC027 (R)2GABA40.4%0.8
PS283 (L)1Glu3.50.3%0.0
PLP262 (R)1ACh3.50.3%0.0
AMMC009 (L)1GABA3.50.3%0.0
SAD003 (R)2ACh3.50.3%0.4
DNpe012_b (R)2ACh3.50.3%0.1
SAD116 (R)2Glu3.50.3%0.1
CB4182 (R)1ACh30.3%0.0
WED143_d (R)2ACh30.3%0.7
LoVP31 (R)1ACh30.3%0.0
PS126 (L)1ACh30.3%0.0
PS051 (L)1GABA30.3%0.0
AMMC025 (R)2GABA30.3%0.3
PLP262 (L)1ACh2.50.2%0.0
PS352 (R)1ACh2.50.2%0.0
SAD080 (R)1Glu2.50.2%0.0
AMMC022 (R)1GABA2.50.2%0.0
WED080 (L)1GABA2.50.2%0.0
PS156 (R)1GABA2.50.2%0.0
PS286 (L)1Glu2.50.2%0.0
MeVP6 (R)3Glu2.50.2%0.6
PLP259 (L)1unc2.50.2%0.0
5-HTPMPV03 (R)15-HT2.50.2%0.0
AN06B057 (L)1GABA20.2%0.0
IB008 (L)1GABA20.2%0.0
AN06B037 (L)1GABA20.2%0.0
PS326 (R)1Glu20.2%0.0
PS107 (R)2ACh20.2%0.5
AMMC005 (R)2Glu20.2%0.5
OLVC5 (R)1ACh20.2%0.0
SAD114 (R)1GABA20.2%0.0
AMMC012 (R)1ACh20.2%0.0
DNpe009 (R)2ACh20.2%0.5
DNg07 (L)2ACh20.2%0.0
SAD111 (R)1GABA20.2%0.0
AMMC005 (L)2Glu20.2%0.5
IB009 (R)1GABA1.50.1%0.0
SMP018 (R)1ACh1.50.1%0.0
CB2944 (R)1GABA1.50.1%0.0
WED100 (R)1Glu1.50.1%0.0
IB058 (R)1Glu1.50.1%0.0
CB2348 (R)1ACh1.50.1%0.0
GNG428 (L)1Glu1.50.1%0.0
PS076 (R)1GABA1.50.1%0.0
WEDPN14 (R)2ACh1.50.1%0.3
M_l2PNl20 (R)1ACh1.50.1%0.0
5-HTPMPV03 (L)15-HT1.50.1%0.0
CB4094 (R)2ACh1.50.1%0.3
AMMC009 (R)1GABA1.50.1%0.0
WED203 (R)1GABA1.50.1%0.0
CB1818 (L)2ACh1.50.1%0.3
ATL035 (R)1Glu10.1%0.0
CL143 (R)1Glu10.1%0.0
PS221 (R)1ACh10.1%0.0
CB2558 (R)1ACh10.1%0.0
DNg36_b (R)1ACh10.1%0.0
AMMC004 (R)1GABA10.1%0.0
ATL036 (R)1Glu10.1%0.0
IB008 (R)1GABA10.1%0.0
PLP250 (R)1GABA10.1%0.0
IB049 (R)1ACh10.1%0.0
PS303 (L)1ACh10.1%0.0
PLP196 (R)1ACh10.1%0.0
AMMC030 (R)1GABA10.1%0.0
GNG504 (R)1GABA10.1%0.0
IB009 (L)1GABA10.1%0.0
PVLP143 (R)1ACh10.1%0.0
DNb06 (R)1ACh10.1%0.0
SAD078 (R)1unc10.1%0.0
PS300 (L)1Glu10.1%0.0
AMMC002 (L)1GABA10.1%0.0
PS153 (R)1Glu10.1%0.0
CB3747 (R)1GABA10.1%0.0
WED167 (R)1ACh10.1%0.0
PS076 (L)1GABA10.1%0.0
AN06B044 (L)1GABA10.1%0.0
CB2501 (R)1ACh10.1%0.0
GNG124 (L)1GABA10.1%0.0
GNG301 (R)1GABA10.1%0.0
WED143_c (R)2ACh10.1%0.0
CB2751 (R)1GABA10.1%0.0
SAD030 (R)2GABA10.1%0.0
WED099 (R)2Glu10.1%0.0
SAD113 (R)2GABA10.1%0.0
PS351 (L)2ACh10.1%0.0
GNG634 (R)1GABA0.50.0%0.0
AMMC008 (R)1Glu0.50.0%0.0
PS238 (L)1ACh0.50.0%0.0
CB1268 (R)1ACh0.50.0%0.0
ATL036 (L)1Glu0.50.0%0.0
VES046 (R)1Glu0.50.0%0.0
CB1533 (L)1ACh0.50.0%0.0
LAL132_b (R)1Glu0.50.0%0.0
IB049 (L)1ACh0.50.0%0.0
CB1493 (R)1ACh0.50.0%0.0
CB3865 (R)1Glu0.50.0%0.0
WED056 (R)1GABA0.50.0%0.0
CB4097 (R)1Glu0.50.0%0.0
CB4097 (L)1Glu0.50.0%0.0
CB4228 (R)1ACh0.50.0%0.0
SAD011 (R)1GABA0.50.0%0.0
WED143_b (R)1ACh0.50.0%0.0
CB2235 (R)1GABA0.50.0%0.0
CB0986 (R)1GABA0.50.0%0.0
WED057 (R)1GABA0.50.0%0.0
PS107 (L)1ACh0.50.0%0.0
IB022 (R)1ACh0.50.0%0.0
PS142 (R)1Glu0.50.0%0.0
CB4118 (R)1GABA0.50.0%0.0
ALIN2 (R)1ACh0.50.0%0.0
WED166_d (R)1ACh0.50.0%0.0
PS312 (R)1Glu0.50.0%0.0
ATL030 (L)1Glu0.50.0%0.0
MeVPMe8 (L)1Glu0.50.0%0.0
PLP260 (L)1unc0.50.0%0.0
MeVC8 (L)1ACh0.50.0%0.0
ATL030 (R)1Glu0.50.0%0.0
CB0540 (R)1GABA0.50.0%0.0
DNge138 (M)1unc0.50.0%0.0
CB0517 (R)1Glu0.50.0%0.0
GNG124 (R)1GABA0.50.0%0.0
OA-VUMa4 (M)1OA0.50.0%0.0
DNge047 (R)1unc0.50.0%0.0
OA-AL2i4 (R)1OA0.50.0%0.0
AN27X008 (L)1HA0.50.0%0.0
LoVC18 (R)1DA0.50.0%0.0
PPM1202 (R)1DA0.50.0%0.0
CB0307 (R)1GABA0.50.0%0.0
PS117_b (R)1Glu0.50.0%0.0
WED200 (R)1GABA0.50.0%0.0
WEDPN8B (R)1ACh0.50.0%0.0
SAD008 (R)1ACh0.50.0%0.0
CB1585 (R)1ACh0.50.0%0.0
CB4104 (R)1ACh0.50.0%0.0
PS114 (R)1ACh0.50.0%0.0
CB1023 (L)1Glu0.50.0%0.0
CB1394_b (R)1Glu0.50.0%0.0
CB2585 (R)1ACh0.50.0%0.0
WED101 (R)1Glu0.50.0%0.0
CB1030 (L)1ACh0.50.0%0.0
AMMC019 (R)1GABA0.50.0%0.0
CB1464 (L)1ACh0.50.0%0.0
CB1145 (R)1GABA0.50.0%0.0
CB2081_b (R)1ACh0.50.0%0.0
DNpe015 (R)1ACh0.50.0%0.0
PS054 (R)1GABA0.50.0%0.0
DNg08 (R)1GABA0.50.0%0.0
DNge111 (R)1ACh0.50.0%0.0
DNpe012_a (R)1ACh0.50.0%0.0
IB096 (L)1Glu0.50.0%0.0
IB097 (L)1Glu0.50.0%0.0
DNge140 (R)1ACh0.50.0%0.0
SAD105 (R)1GABA0.50.0%0.0
WEDPN9 (R)1ACh0.50.0%0.0

Outputs

downstream
partner
#NTconns
WED100
%
Out
CV
WED203 (R)1GABA7311.2%0.0
CB1493 (R)2ACh436.6%0.1
CB1849 (R)2ACh36.55.6%0.4
ATL030 (R)1Glu345.2%0.0
CB2309 (R)2ACh284.3%0.4
WED165 (R)1ACh25.53.9%0.0
LAL138 (R)1GABA20.53.2%0.0
CB4104 (R)3ACh203.1%0.8
SAD007 (R)3ACh203.1%0.5
CB1585 (R)1ACh192.9%0.0
SAD006 (R)1ACh172.6%0.0
WED031 (R)3GABA16.52.5%0.3
ATL030 (L)1Glu15.52.4%0.0
CB1047 (R)2ACh15.52.4%0.5
SAD003 (R)2ACh15.52.4%0.5
SAD004 (R)4ACh121.8%0.8
DNge184 (R)1ACh11.51.8%0.0
CB1213 (R)1ACh10.51.6%0.0
CB2050 (R)3ACh101.5%0.9
CB2501 (R)3ACh9.51.5%0.3
CB2859 (R)2GABA91.4%0.1
SAD077 (R)4Glu8.51.3%0.2
WEDPN14 (R)3ACh8.51.3%0.5
DNge111 (R)2ACh7.51.2%0.5
AMMC011 (R)1ACh7.51.2%0.0
DNp73 (R)1ACh60.9%0.0
WED096 (R)2Glu5.50.8%0.3
DNge145 (R)2ACh50.8%0.8
WED167 (R)2ACh50.8%0.8
WED098 (R)3Glu50.8%0.1
SAD049 (R)1ACh4.50.7%0.0
CB3682 (R)1ACh40.6%0.0
WED057 (R)2GABA40.6%0.5
WEDPN8B (R)4ACh40.6%0.5
DNg110 (R)1ACh3.50.5%0.0
CB0540 (R)1GABA3.50.5%0.0
CB2585 (R)3ACh3.50.5%0.5
CB2348 (R)1ACh30.5%0.0
CB2859 (L)2GABA30.5%0.7
ATL044 (R)1ACh30.5%0.0
PLP097 (R)1ACh2.50.4%0.0
CB2940 (R)1ACh2.50.4%0.0
IB008 (R)1GABA2.50.4%0.0
DNg09_a (R)1ACh2.50.4%0.0
WED166_d (R)1ACh2.50.4%0.0
PS221 (R)1ACh2.50.4%0.0
CB2081_b (R)2ACh2.50.4%0.2
CB2153 (R)2ACh20.3%0.5
WED166_a (R)1ACh20.3%0.0
AMMC006 (R)1Glu20.3%0.0
CB3739 (R)2GABA20.3%0.5
SAD080 (R)1Glu1.50.2%0.0
WED100 (R)1Glu1.50.2%0.0
DNge140 (R)1ACh1.50.2%0.0
IB092 (R)1Glu1.50.2%0.0
CB1977 (R)1ACh1.50.2%0.0
CB2963 (R)1ACh1.50.2%0.0
ALIN6 (R)1GABA1.50.2%0.0
CB4143 (L)2GABA1.50.2%0.3
CB0987 (R)1GABA10.2%0.0
AMMC002 (L)1GABA10.2%0.0
WED143_c (R)1ACh10.2%0.0
CB1023 (L)1Glu10.2%0.0
CB4105 (R)1ACh10.2%0.0
WED143_c (L)1ACh10.2%0.0
CB4062 (R)1GABA10.2%0.0
IB033 (L)1Glu10.2%0.0
IB120 (R)1Glu10.2%0.0
ALIN6 (L)1GABA10.2%0.0
AOTU052 (R)1GABA10.2%0.0
DNp31 (R)1ACh10.2%0.0
IB008 (L)1GABA10.2%0.0
IB018 (R)1ACh10.2%0.0
CB2972 (R)1ACh10.2%0.0
AMMC015 (R)1GABA10.2%0.0
WEDPN1A (R)1GABA10.2%0.0
DNpe012_b (R)1ACh10.2%0.0
DNpe012_a (R)1ACh10.2%0.0
DNg05_a (R)1ACh10.2%0.0
CB0285 (R)1ACh10.2%0.0
WED208 (R)1GABA10.2%0.0
CB0986 (R)2GABA10.2%0.0
CB3320 (R)1GABA10.2%0.0
CB4143 (R)2GABA10.2%0.0
WED004 (R)1ACh10.2%0.0
CB2252 (R)2Glu10.2%0.0
AMMC019 (R)2GABA10.2%0.0
CB3745 (R)1GABA10.2%0.0
SAD078 (R)2unc10.2%0.0
AMMC006 (L)2Glu10.2%0.0
CB1394_b (R)2Glu10.2%0.0
WED056 (R)2GABA10.2%0.0
CB1145 (R)2GABA10.2%0.0
WED097 (R)1Glu0.50.1%0.0
PLP247 (R)1Glu0.50.1%0.0
MeVC9 (L)1ACh0.50.1%0.0
WED143_d (R)1ACh0.50.1%0.0
PS153 (R)1Glu0.50.1%0.0
CB2653 (R)1Glu0.50.1%0.0
CB1030 (R)1ACh0.50.1%0.0
WED101 (R)1Glu0.50.1%0.0
CB2558 (R)1ACh0.50.1%0.0
PS037 (R)1ACh0.50.1%0.0
CB3738 (R)1GABA0.50.1%0.0
CB3437 (R)1ACh0.50.1%0.0
IB096 (R)1Glu0.50.1%0.0
WEDPN1B (R)1GABA0.50.1%0.0
PS350 (R)1ACh0.50.1%0.0
CB2855 (R)1ACh0.50.1%0.0
ATL032 (R)1unc0.50.1%0.0
PS029 (R)1ACh0.50.1%0.0
CB0224 (R)1GABA0.50.1%0.0
WED122 (R)1GABA0.50.1%0.0
DNge016 (R)1ACh0.50.1%0.0
PS187 (R)1Glu0.50.1%0.0
MeVC8 (L)1ACh0.50.1%0.0
DNge084 (R)1GABA0.50.1%0.0
DNge043 (R)1ACh0.50.1%0.0
PS116 (R)1Glu0.50.1%0.0
JO-C/D/E1ACh0.50.1%0.0
CB4097 (L)1Glu0.50.1%0.0
IB009 (R)1GABA0.50.1%0.0
IB097 (R)1Glu0.50.1%0.0
SAD008 (R)1ACh0.50.1%0.0
CB1131 (R)1ACh0.50.1%0.0
CB1464 (R)1ACh0.50.1%0.0
CB4228 (R)1ACh0.50.1%0.0
CB1464 (L)1ACh0.50.1%0.0
SAD079 (R)1Glu0.50.1%0.0
MeVP55 (L)1Glu0.50.1%0.0
SAD064 (R)1ACh0.50.1%0.0
PS217 (R)1ACh0.50.1%0.0
SAD093 (R)1ACh0.50.1%0.0
DNg32 (R)1ACh0.50.1%0.0
LPT59 (R)1Glu0.50.1%0.0
SAD112_c (R)1GABA0.50.1%0.0
5-HTPMPV03 (L)15-HT0.50.1%0.0