Male CNS – Cell Type Explorer

VM1_lPN(R)[DC]{09B_put1}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
6,272
Total Synapses
Post: 4,436 | Pre: 1,836
log ratio : -1.27
6,272
Mean Synapses
Post: 4,436 | Pre: 1,836
log ratio : -1.27
ACh(93.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(R)3,96989.5%-2.5169738.0%
LH(R)3327.5%1.2076441.6%
CA(R)922.1%1.5026014.2%
CentralBrain-unspecified431.0%1.421156.3%

Connectivity

Inputs

upstream
partner
#NTconns
VM1_lPN
%
In
CV
ORN_VM130ACh1,77444.9%0.5
lLN1_bc (R)15ACh2646.7%0.3
ORN_VM6v26ACh1263.2%0.9
lLN2X12 (R)5ACh962.4%0.6
lLN2P_b (R)4GABA932.4%1.0
il3LN6 (L)1GABA802.0%0.0
vLN27 (R)1unc782.0%0.0
lLN2X04 (R)2ACh761.9%0.0
lLN2F_b (R)2GABA721.8%0.7
lLN2T_a (R)2ACh681.7%0.4
lLN2T_e (R)2ACh591.5%0.4
lLN2T_c (R)2ACh581.5%0.2
lLN2T_b (R)2ACh561.4%0.6
lLN2X02 (R)3GABA541.4%0.4
lLN2X05 (R)2ACh521.3%0.7
lLN2X11 (R)2ACh491.2%0.1
LHPV12a1 (R)1GABA441.1%0.0
lLN2R_a (R)3GABA431.1%0.4
lLN2P_c (R)3GABA401.0%0.5
lLN2F_a (R)2unc360.9%0.1
lLN2P_a (R)1GABA350.9%0.0
KCg-m (R)27DA330.8%0.4
lLN13 (R)3GABA320.8%0.6
v2LN30 (R)1unc310.8%0.0
lLN1_a (R)1ACh270.7%0.0
ORN_VC511ACh270.7%0.5
APL (R)1GABA220.6%0.0
il3LN6 (R)1GABA210.5%0.0
LHPV4b4 (R)5Glu210.5%0.3
CB3417 (R)3unc200.5%0.7
OA-VUMa2 (M)2OA190.5%0.6
LHPV4a5 (R)5Glu190.5%1.1
MB-C1 (R)3GABA190.5%0.5
LHPV4j2 (R)1Glu140.4%0.0
CB1432 (R)2GABA140.4%0.4
LHAV4g12 (R)2GABA140.4%0.4
CB1503 (R)3Glu130.3%0.6
LHPV4i1 (R)3Glu120.3%0.2
M_lPNm11D (R)3ACh120.3%0.2
CB2755 (R)1GABA100.3%0.0
VM6_adPN (R)1ACh90.2%0.0
CB3202 (R)2ACh90.2%0.3
CB2691 (R)1GABA80.2%0.0
CB1824 (R)1GABA70.2%0.0
LHPV4j4 (R)1Glu70.2%0.0
OA-VUMa5 (M)1OA70.2%0.0
v2LN3A (R)2unc70.2%0.1
ALIN5 (L)1GABA60.2%0.0
DM5_lPN (R)1ACh60.2%0.0
CB3728 (R)1GABA60.2%0.0
LHPV4a9 (R)1Glu60.2%0.0
LHCENT2 (R)1GABA60.2%0.0
VL2p_adPN (R)1ACh60.2%0.0
lLN12A (R)2ACh60.2%0.0
M_ilPNm90 (R)1ACh50.1%0.0
CSD (L)15-HT50.1%0.0
CB2908 (R)2ACh50.1%0.6
VA7m_lPN (R)2ACh50.1%0.6
v2LN3A1_b (R)2ACh50.1%0.2
CB2107 (R)2GABA50.1%0.2
VC5_lvPN (R)3ACh50.1%0.3
DA1_lPN (R)4ACh50.1%0.3
M_imPNl92 (R)1ACh40.1%0.0
LHAV7a1_a (R)1Glu40.1%0.0
M_lPNm11B (R)1ACh40.1%0.0
v2LN3A1_a (R)1ACh40.1%0.0
M_ilPNm90 (L)1ACh40.1%0.0
M_l2PN3t18 (R)1ACh40.1%0.0
v2LN5 (R)1ACh40.1%0.0
LHPV4a3 (R)2Glu40.1%0.5
DA2_lPN (R)2ACh40.1%0.5
ORN_VM6m2ACh40.1%0.0
vLN24 (R)1ACh30.1%0.0
LHCENT4 (R)1Glu30.1%0.0
CB2786 (R)1Glu30.1%0.0
CB1619 (R)1GABA30.1%0.0
CB1509 (R)1GABA30.1%0.0
CB2038 (R)1GABA30.1%0.0
LHAV4b4 (R)1GABA30.1%0.0
ALIN2 (R)1ACh30.1%0.0
LN60 (R)1GABA30.1%0.0
LHPV1c1 (R)2ACh30.1%0.3
M_adPNm5 (R)2ACh30.1%0.3
LHPV2b3 (R)2GABA30.1%0.3
M_lPNm11A (R)2ACh30.1%0.3
M_l2PNm16 (R)2ACh30.1%0.3
LHCENT3 (R)1GABA20.1%0.0
TRN_VP21ACh20.1%0.0
HRN_VP1d1ACh20.1%0.0
CB2111 (R)1Glu20.1%0.0
CB2480 (R)1GABA20.1%0.0
LHPV4k1 (R)1Glu20.1%0.0
CB3051 (R)1GABA20.1%0.0
CB2906 (R)1GABA20.1%0.0
CB3732 (R)1GABA20.1%0.0
CB3278 (R)1Glu20.1%0.0
LHAV4g14 (R)1GABA20.1%0.0
v2LN37 (R)1Glu20.1%0.0
LHAD1f2 (R)1Glu20.1%0.0
ALIN7 (L)1GABA20.1%0.0
KCab-m (R)2DA20.1%0.0
LHPV4b3 (R)2Glu20.1%0.0
KCa'b'-ap1 (R)2DA20.1%0.0
DL2v_adPN (R)2ACh20.1%0.0
LHAV4g13 (R)2GABA20.1%0.0
ORN_VM6l1ACh10.0%0.0
v2LN5 (L)1ACh10.0%0.0
DA3_adPN (R)1ACh10.0%0.0
VA5_lPN (R)1ACh10.0%0.0
v2LN42 (R)1Glu10.0%0.0
LHPV5c1 (R)1ACh10.0%0.0
LHAV7a5 (R)1Glu10.0%0.0
LHPD2a6 (R)1Glu10.0%0.0
CB1219 (R)1Glu10.0%0.0
KCab-s (R)1DA10.0%0.0
KCg-d (R)1DA10.0%0.0
v2LNX01 (R)1unc10.0%0.0
M_vPNml60 (R)1GABA10.0%0.0
LHPV4i3 (R)1Glu10.0%0.0
CB3733 (R)1GABA10.0%0.0
CB2770 (R)1GABA10.0%0.0
CB2064 (R)1Glu10.0%0.0
LHPD3a4_b (R)1Glu10.0%0.0
LHPV4b2 (R)1Glu10.0%0.0
v2LN32 (R)1Glu10.0%0.0
CB3007 (R)1GABA10.0%0.0
LHPV4a8 (R)1Glu10.0%0.0
M_vPNml76 (R)1GABA10.0%0.0
M_adPNm4 (R)1ACh10.0%0.0
LHAV4a5 (R)1GABA10.0%0.0
CB2764 (R)1GABA10.0%0.0
CB4114 (R)1Glu10.0%0.0
CB2880 (R)1GABA10.0%0.0
CB2678 (R)1GABA10.0%0.0
CB1527 (R)1GABA10.0%0.0
CB2861 (R)1unc10.0%0.0
CB3212 (R)1ACh10.0%0.0
LHAV2b9 (R)1ACh10.0%0.0
CB2831 (R)1GABA10.0%0.0
LHAV4e4 (R)1unc10.0%0.0
v2LN50 (R)1Glu10.0%0.0
LHPV4i4 (R)1Glu10.0%0.0
WEDPN3 (R)1GABA10.0%0.0
LHPV4a7_d (R)1Glu10.0%0.0
LHAV2b2_c (R)1ACh10.0%0.0
LHPV2a1_d (R)1GABA10.0%0.0
ALIN3 (L)1ACh10.0%0.0
CB1405 (R)1Glu10.0%0.0
CB4119 (R)1Glu10.0%0.0
ALIN3 (R)1ACh10.0%0.0
LHAV6b1 (R)1ACh10.0%0.0
vLN28 (R)1Glu10.0%0.0
LHAV4a2 (R)1GABA10.0%0.0
VP2+VC5_l2PN (L)1ACh10.0%0.0
vLN24 (L)1ACh10.0%0.0
M_vPNml50 (R)1GABA10.0%0.0
M_imPNl92 (L)1ACh10.0%0.0
lLN2T_d (R)1unc10.0%0.0
DNc01 (L)1unc10.0%0.0
LHMB1 (R)1Glu10.0%0.0
VC1_lPN (R)1ACh10.0%0.0
DNc02 (L)1unc10.0%0.0
AL-MBDL1 (R)1ACh10.0%0.0
PPL202 (R)1DA10.0%0.0
DP1l_adPN (R)1ACh10.0%0.0
DP1m_adPN (R)1ACh10.0%0.0

Outputs

downstream
partner
#NTconns
VM1_lPN
%
Out
CV
KCg-m (R)39DA87113.7%0.5
lLN1_bc (R)15ACh4096.4%0.3
KCab-s (R)14DA2524.0%0.4
lLN2T_c (R)2ACh2243.5%0.2
lLN2P_a (R)3GABA1552.4%1.1
lLN2P_b (R)5GABA1392.2%1.4
KCa'b'-ap2 (R)5DA1302.0%0.8
lLN2T_e (R)2ACh1272.0%0.4
KCab-m (R)6DA1221.9%0.4
LHAV2c1 (R)6ACh1191.9%0.6
LHPV4a5 (R)5Glu1151.8%0.8
KCa'b'-ap1 (R)4DA1151.8%0.6
lLN2X04 (R)2ACh1121.8%0.1
ORN_VM6v28ACh1101.7%0.8
LHPV4j4 (R)1Glu1041.6%0.0
lLN2X12 (R)5ACh981.5%0.6
LHAV4g12 (R)2GABA891.4%0.3
LHAV2b3 (R)2ACh871.4%0.1
M_l2PN3t18 (R)2ACh861.4%0.1
lLN2T_a (R)2ACh801.3%0.5
lLN2F_b (R)2GABA761.2%0.9
lLN2X05 (R)2ACh741.2%0.7
lLN2P_c (R)3GABA721.1%0.9
LHPV4i1 (R)3Glu711.1%0.2
LHPV5h2_b (R)2ACh540.9%0.7
lLN2T_b (R)2ACh540.9%0.4
LHAV6b1 (R)1ACh530.8%0.0
APL (R)1GABA530.8%0.0
LHAV2b2_c (R)1ACh500.8%0.0
LHPV1c1 (R)2ACh500.8%0.4
M_imPNl92 (L)1ACh480.8%0.0
M_vPNml50 (R)2GABA480.8%0.0
LHAD1c3 (R)2ACh460.7%0.4
M_imPNl92 (R)1ACh420.7%0.0
LHPV4i4 (R)1Glu420.7%0.0
LHPV12a1 (R)1GABA420.7%0.0
LHAV1a1 (R)2ACh420.7%0.4
CB3212 (R)1ACh410.6%0.0
LHAV3e3_a (R)1ACh410.6%0.0
LHAV2i4 (R)2ACh400.6%0.6
M_l2PNm16 (R)2ACh400.6%0.4
lLN2X11 (R)2ACh390.6%0.3
KCab-c (R)2DA380.6%0.1
ORN_VM115ACh360.6%0.7
LHAV4d1 (R)4unc350.6%0.7
lLN1_a (R)1ACh340.5%0.0
LHAV6a5 (R)3ACh340.5%0.4
vLN28 (R)1Glu330.5%0.0
CB1503 (R)3Glu320.5%0.5
CB1308 (R)2ACh310.5%0.6
CB3728 (R)1GABA290.5%0.0
CB4114 (R)4Glu290.5%0.5
LHPV6h2 (R)3ACh280.4%1.1
M_ilPNm90 (R)1ACh270.4%0.0
LHAV3f1 (R)1Glu270.4%0.0
v2LN30 (R)1unc270.4%0.0
CB2691 (R)1GABA260.4%0.0
CB4209 (R)2ACh260.4%0.5
lLN13 (R)3GABA260.4%0.5
CB1413 (R)1ACh250.4%0.0
lLN2F_a (R)2unc250.4%0.3
LHAV2g3 (R)3ACh250.4%0.5
CB2111 (R)1Glu230.4%0.0
LHAV2b9 (R)1ACh220.3%0.0
CB1655 (R)1ACh220.3%0.0
CB1850 (R)2Glu220.3%0.5
LHAV3i1 (R)1ACh210.3%0.0
CB1509 (R)1GABA200.3%0.0
LHAV6a7 (R)4ACh200.3%0.5
LHPV4j2 (R)1Glu190.3%0.0
LHPV4a7 (R)2Glu190.3%0.9
LHPV4i3 (R)3Glu180.3%1.2
LHAV1a4 (R)3ACh180.3%0.7
LHAV2g2_b (R)2ACh180.3%0.2
LHPV5c1_a (R)4ACh180.3%0.7
LHPV4a2 (R)3Glu180.3%0.3
CB2805 (R)2ACh170.3%0.9
CB3733 (R)2GABA170.3%0.4
CB3393 (R)2Glu170.3%0.2
LHPV5b2 (R)5ACh170.3%0.9
CB2877 (R)1ACh150.2%0.0
M_l2PNl21 (R)1ACh150.2%0.0
M_l2PN10t19 (R)2ACh140.2%0.7
CB2770 (R)3GABA140.2%0.6
CB3278 (R)1Glu130.2%0.0
LHPV4k1 (R)2Glu130.2%0.5
LHPV6h1 (R)2ACh130.2%0.2
LHAV4g6_a (R)3GABA130.2%0.5
vLN29 (R)1unc120.2%0.0
LHAD1f2 (R)1Glu120.2%0.0
DL2v_adPN (R)2ACh120.2%0.7
LHPV5c1 (R)3ACh120.2%0.6
M_ilPNm90 (L)1ACh110.2%0.0
MB-C1 (R)2GABA110.2%0.6
CB2906 (R)2GABA110.2%0.3
LHAV6b4 (R)1ACh100.2%0.0
LHAV4g17 (R)1GABA100.2%0.0
CB2038 (R)2GABA100.2%0.4
lLN2R_a (R)3GABA100.2%0.5
LHPV6a10 (R)1ACh90.1%0.0
LHAV2g2_a (R)2ACh90.1%0.6
LHAD1b3 (R)2ACh90.1%0.1
CB2755 (R)1GABA80.1%0.0
CB1432 (R)2GABA80.1%0.8
CB1201 (R)2ACh80.1%0.8
LHAV4g7_a (R)2GABA80.1%0.8
LHAV4b4 (R)2GABA80.1%0.8
OA-VUMa2 (M)2OA80.1%0.8
LHPV4g2 (R)3Glu80.1%0.6
VA7m_lPN (R)3ACh80.1%0.5
LHCENT3 (R)1GABA70.1%0.0
LHAV5d1 (R)1ACh70.1%0.0
WEDPN3 (R)1GABA70.1%0.0
v2LN3A (R)2unc70.1%0.7
vLN25 (R)2Glu70.1%0.4
VC5_lvPN (R)3ACh70.1%0.2
WED182 (R)1ACh60.1%0.0
v2LN3A1_b (R)1ACh60.1%0.0
CB2725 (R)1Glu60.1%0.0
LHAV3e5 (R)1ACh60.1%0.0
LHAV4g14 (R)1GABA60.1%0.0
v2LN3A1_a (R)1ACh60.1%0.0
ORN_VC53ACh60.1%0.7
LHAV4g13 (R)2GABA60.1%0.3
LHAV3e1 (R)2ACh60.1%0.0
VM6_adPN (R)1ACh50.1%0.0
LHPD3a5 (R)1Glu50.1%0.0
CB2064 (R)1Glu50.1%0.0
LHAD1f1 (R)1Glu50.1%0.0
DL3_lPN (R)1ACh50.1%0.0
CB2045 (R)1ACh50.1%0.0
LHPV4j3 (R)1Glu50.1%0.0
AL-MBDL1 (L)1ACh50.1%0.0
CB4208 (R)2ACh50.1%0.6
M_lPNm11D (R)2ACh50.1%0.6
CB2107 (R)2GABA50.1%0.6
DA2_lPN (R)2ACh50.1%0.2
vLN27 (R)1unc40.1%0.0
LHPD4c1 (R)1ACh40.1%0.0
CB2208 (R)1ACh40.1%0.0
LHAV7a5 (R)1Glu40.1%0.0
LHAD1a1 (R)1ACh40.1%0.0
LHAV2k13 (R)1ACh40.1%0.0
ALIN3 (R)1ACh40.1%0.0
LHPV6c1 (R)1ACh40.1%0.0
CSD (L)15-HT40.1%0.0
VP1m_l2PN (R)1ACh40.1%0.0
VL2p_adPN (R)1ACh40.1%0.0
LHAV2b5 (R)2ACh40.1%0.5
CB3417 (R)2unc40.1%0.5
lLN2X02 (R)2GABA40.1%0.5
LHPV2b3 (R)3GABA40.1%0.4
LHPV4b2 (R)2Glu40.1%0.0
CB1219 (R)2Glu40.1%0.0
LHPV4b4 (R)3Glu40.1%0.4
CB0947 (R)3ACh40.1%0.4
DA1_lPN (R)2ACh40.1%0.0
il3LN6 (L)1GABA30.0%0.0
LHPV4a3 (R)1Glu30.0%0.0
CB1570 (R)1ACh30.0%0.0
CB2851 (R)1GABA30.0%0.0
LHAD3a1 (R)1ACh30.0%0.0
CB2678 (R)1GABA30.0%0.0
LHPV5a1 (R)1ACh30.0%0.0
LHAV4e4 (R)1unc30.0%0.0
LHAV3d1 (R)1Glu30.0%0.0
LHAV3e4_b (R)1ACh30.0%0.0
LH005m (R)1GABA30.0%0.0
LHAD1h1 (R)1GABA30.0%0.0
M_l2PN10t19 (L)1ACh30.0%0.0
LHCENT2 (R)1GABA30.0%0.0
v2LN5 (R)1ACh30.0%0.0
DL2d_adPN (R)2ACh30.0%0.3
LHAV2b2_a (R)2ACh30.0%0.3
LHAV7a1_a (R)1Glu20.0%0.0
M_adPNm5 (R)1ACh20.0%0.0
CB3608 (R)1ACh20.0%0.0
LHAD1b4 (R)1ACh20.0%0.0
CB4107 (R)1ACh20.0%0.0
LHAD3b1_a (R)1ACh20.0%0.0
CB3007 (R)1GABA20.0%0.0
LHAD1b2 (R)1ACh20.0%0.0
LHPV5a2 (R)1ACh20.0%0.0
M_adPNm4 (R)1ACh20.0%0.0
CB2764 (R)1GABA20.0%0.0
LHPD2a4_b (R)1ACh20.0%0.0
CB1333 (R)1ACh20.0%0.0
LHPV4b3 (R)1Glu20.0%0.0
CB1300 (R)1ACh20.0%0.0
PLP156 (R)1ACh20.0%0.0
CB2379 (R)1ACh20.0%0.0
CB3051 (R)1GABA20.0%0.0
CB1276 (R)1ACh20.0%0.0
LHAD1a4_a (R)1ACh20.0%0.0
CB1241 (R)1ACh20.0%0.0
CB2048 (R)1ACh20.0%0.0
CB4132 (R)1ACh20.0%0.0
LHPD2a2 (R)1ACh20.0%0.0
CB0367 (R)1Glu20.0%0.0
ALIN2 (R)1ACh20.0%0.0
VP2+VC5_l2PN (R)1ACh20.0%0.0
VP2+VC5_l2PN (L)1ACh20.0%0.0
v2LN31 (R)1unc20.0%0.0
vLN24 (L)1ACh20.0%0.0
OA-VUMa5 (M)1OA20.0%0.0
LHMB1 (R)1Glu20.0%0.0
AL-MBDL1 (R)1ACh20.0%0.0
DM5_lPN (R)2ACh20.0%0.0
LHAV2b6 (R)2ACh20.0%0.0
LHPV4a1 (R)2Glu20.0%0.0
LHPV2b5 (R)2GABA20.0%0.0
LHPV4a9 (R)2Glu20.0%0.0
ORN_VM6m1ACh10.0%0.0
CB2051 (R)1ACh10.0%0.0
DA3_adPN (R)1ACh10.0%0.0
DL1_adPN (R)1ACh10.0%0.0
vLN24 (R)1ACh10.0%0.0
LHPV5b1 (R)1ACh10.0%0.0
LHPV2b2_a (R)1GABA10.0%0.0
CB1909 (R)1ACh10.0%0.0
LHPD2a6 (R)1Glu10.0%0.0
CB3374 (R)1ACh10.0%0.0
CB2786 (R)1Glu10.0%0.0
LHPV2a4 (R)1GABA10.0%0.0
CB2226 (R)1ACh10.0%0.0
VM6_lvPN (R)1ACh10.0%0.0
LHAV6a3 (R)1ACh10.0%0.0
LHPV5c2 (R)1ACh10.0%0.0
CB2958 (R)1unc10.0%0.0
CB2920 (R)1Glu10.0%0.0
LHPV4c2 (R)1Glu10.0%0.0
CB3045 (R)1Glu10.0%0.0
CB1577 (R)1Glu10.0%0.0
LHPV4a8 (R)1Glu10.0%0.0
CB1619 (R)1GABA10.0%0.0
CB2889 (R)1unc10.0%0.0
LHPV4g1 (R)1Glu10.0%0.0
CB2880 (R)1GABA10.0%0.0
LHPV6h1_b (R)1ACh10.0%0.0
CB2224 (R)1ACh10.0%0.0
LHPV5h2_a (R)1ACh10.0%0.0
CB1527 (R)1GABA10.0%0.0
CB1771 (R)1ACh10.0%0.0
CB1160 (R)1Glu10.0%0.0
LHAV6b3 (R)1ACh10.0%0.0
LHAV3e4_a (R)1ACh10.0%0.0
LHAV2k11_a (R)1ACh10.0%0.0
LHAD1b2_d (R)1ACh10.0%0.0
LHAD2e1 (R)1ACh10.0%0.0
LHPV4a11 (R)1Glu10.0%0.0
CL126 (R)1Glu10.0%0.0
LHPV2a1_d (R)1GABA10.0%0.0
v2LN37 (R)1Glu10.0%0.0
LHAV3b13 (R)1ACh10.0%0.0
LHAV2n1 (R)1GABA10.0%0.0
LHAV3a1_c (R)1ACh10.0%0.0
LHAV3k6 (R)1ACh10.0%0.0
SLP382 (R)1Glu10.0%0.0
M_lvPNm24 (R)1ACh10.0%0.0
VA5_lPN (R)1ACh10.0%0.0
LHAV3k1 (R)1ACh10.0%0.0
M_lvPNm25 (R)1ACh10.0%0.0
mALB1 (L)1GABA10.0%0.0
PPL201 (R)1DA10.0%0.0
M_smPN6t2 (L)1GABA10.0%0.0
AL-AST1 (R)1ACh10.0%0.0
M_l2PNl20 (R)1ACh10.0%0.0
il3LN6 (R)1GABA10.0%0.0