Male CNS – Cell Type Explorer

TuBu01(R)

10
Total Neurons
Right: 5 | Left: 5
log ratio : 0.00
3,889
Total Synapses
Post: 3,215 | Pre: 674
log ratio : -2.25
777.8
Mean Synapses
Post: 643 | Pre: 134.8
log ratio : -2.25
ACh(94.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AOTU(R)2,55779.5%-8.7460.9%
BU(R)36911.5%0.8365597.2%
CentralBrain-unspecified2889.0%-4.58121.8%
gL(R)10.0%0.0010.1%

Connectivity

Inputs

upstream
partner
#NTconns
TuBu01
%
In
CV
MeTu2a (R)36ACh298.247.2%0.2
DN1pB (R)2Glu457.1%0.1
TuTuB_a (L)1unc325.1%0.0
MeTu2b (R)16ACh31.24.9%0.5
TuTuB_b (R)1Glu28.64.5%0.0
TuTuB_b (L)1Glu26.64.2%0.0
ExR5 (L)2Glu25.24.0%0.1
MeTu1 (R)43ACh23.23.7%1.0
ExR5 (R)2Glu22.63.6%0.3
AOTU046 (R)2Glu203.2%0.2
LC10a (R)19ACh15.22.4%0.7
AOTU046 (L)2Glu142.2%0.0
MeTu3b (R)21ACh81.3%1.1
MeTu3c (R)26ACh7.61.2%0.4
TuTuB_a (R)1unc4.40.7%0.0
MeTu4b (R)3ACh30.5%0.4
MeTu4d (R)8ACh2.80.4%0.6
ExR2 (L)2DA2.60.4%0.1
ER4m (R)6GABA2.20.3%0.5
AOTU047 (R)1Glu20.3%0.0
MeTu4e (R)6ACh20.3%0.3
ExR3 (R)15-HT1.80.3%0.0
ExR2 (R)2DA1.60.3%0.0
MeTu3a (R)4ACh1.20.2%0.6
ExR3 (L)15-HT1.20.2%0.0
TuBu01 (R)2ACh10.2%0.2
AOTU055 (R)2GABA0.80.1%0.5
ER6 (R)2GABA0.80.1%0.5
CL031 (R)1Glu0.60.1%0.0
LC10d (R)2ACh0.60.1%0.3
TuBu06 (R)2ACh0.60.1%0.3
LAL206 (R)1Glu0.60.1%0.0
MeTu4c (R)1ACh0.40.1%0.0
AOTU038 (L)1Glu0.40.1%0.0
LoVC22 (L)1DA0.40.1%0.0
ExR1 (L)1ACh0.40.1%0.0
TuBu08 (R)1ACh0.20.0%0.0
ER4d (R)1GABA0.20.0%0.0
AVLP035 (R)1ACh0.20.0%0.0
ExR1 (R)1ACh0.20.0%0.0
mALB5 (L)1GABA0.20.0%0.0
ER3a_a (R)1GABA0.20.0%0.0
ER5 (R)1GABA0.20.0%0.0
TuBu03 (R)1ACh0.20.0%0.0
LoVP83 (R)1ACh0.20.0%0.0
TuBu09 (R)1ACh0.20.0%0.0
MeTu4f (R)1ACh0.20.0%0.0
ICL010m (R)1ACh0.20.0%0.0

Outputs

downstream
partner
#NTconns
TuBu01
%
Out
CV
ER4m (R)6GABA17555.9%0.2
ExR1 (R)2ACh67.621.6%0.2
ExR1 (L)2ACh53.217.0%0.1
AOTU046 (R)2Glu6.82.2%0.2
AOTU046 (L)2Glu4.41.4%0.5
MeTu2a (R)6ACh1.20.4%0.0
TuBu01 (R)4ACh10.3%0.3
TuTuB_b (L)1Glu0.60.2%0.0
ExR2 (L)1DA0.40.1%0.0
ExR3 (R)15-HT0.40.1%0.0
TuTuB_b (R)1Glu0.40.1%0.0
TuBu06 (R)2ACh0.40.1%0.0
ExR2 (R)1DA0.20.1%0.0
MeTu2b (R)1ACh0.20.1%0.0
ExR3 (L)15-HT0.20.1%0.0
TuTuB_a (L)1unc0.20.1%0.0
LoVC22 (L)1DA0.20.1%0.0
EL (L)1OA0.20.1%0.0
TuBu03 (R)1ACh0.20.1%0.0
ExR5 (R)1Glu0.20.1%0.0