Male CNS – Cell Type Explorer

TRN_VP2(L)

7
Total Neurons
Right: 3 | Left: 4
log ratio : 0.42
2,700
Total Synapses
Post: 1,262 | Pre: 1,438
log ratio : 0.19
675
Mean Synapses
Post: 315.5 | Pre: 359.5
log ratio : 0.19
ACh(86.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(L)1,26099.8%0.191,43399.7%
CentralBrain-unspecified20.2%1.3250.3%

Connectivity

Inputs

upstream
partner
#NTconns
TRN_VP2
%
In
CV
lLN2F_b (L)2GABA45.817.9%0.3
lLN2F_a (L)2unc32.812.8%0.1
lLN2R_a (L)2GABA249.4%0.1
lLN2X12 (L)6ACh239.0%0.2
lLN2X11 (L)2ACh228.6%0.3
lLN1_bc (L)14ACh21.28.3%0.9
lLN2T_b (L)2ACh218.2%0.1
lLN2X04 (L)2ACh12.24.8%0.3
lLN2X05 (L)2ACh10.24.0%0.1
lLN1_a (L)1ACh7.83.0%0.0
VP2_adPN (L)1ACh4.21.7%0.0
lLN2P_b (L)1GABA3.51.4%0.0
TRN_VP23ACh3.51.4%0.2
OA-VUMa5 (M)2OA31.2%0.8
lLN2P_c (L)4GABA31.2%0.5
lLN2T_e (L)2ACh2.51.0%0.4
l2LN20 (L)3GABA1.50.6%0.4
OA-VUMa2 (M)2OA1.50.6%0.7
v2LN50 (R)2Glu10.4%0.5
v2LN49 (L)1Glu10.4%0.0
v2LNX01 (L)1unc0.80.3%0.0
VP2_l2PN (L)1ACh0.80.3%0.0
CB1048 (L)1Glu0.50.2%0.0
SMP142 (L)1unc0.50.2%0.0
CB1824 (L)2GABA0.50.2%0.0
VP1m+VP2_lvPN2 (L)2ACh0.50.2%0.0
vLN24 (L)2ACh0.50.2%0.0
lLN2T_a (L)2ACh0.50.2%0.0
l2LN20 (R)2GABA0.50.2%0.0
lLN2X02 (L)2GABA0.50.2%0.0
HRN_VP42ACh0.50.2%0.0
VP2+_adPN (L)1ACh0.20.1%0.0
VP4+VL1_l2PN (R)1ACh0.20.1%0.0
TRN_VP1m1ACh0.20.1%0.0
lLN2T_c (L)1ACh0.20.1%0.0
CSD (R)15-HT0.20.1%0.0
v2LN5 (L)1ACh0.20.1%0.0
v2LN38 (L)1ACh0.20.1%0.0
v2LN3A1_a (L)1ACh0.20.1%0.0
v2LN41 (L)1unc0.20.1%0.0
v2LN42 (R)1Glu0.20.1%0.0
M_vPNml60 (L)1GABA0.20.1%0.0
ALBN1 (R)1unc0.20.1%0.0
DNc02 (R)1unc0.20.1%0.0
DNp32 (R)1unc0.20.1%0.0
M_lPNm11A (R)1ACh0.20.1%0.0
v2LN50 (L)1Glu0.20.1%0.0
v2LN32 (L)1Glu0.20.1%0.0
M_adPNm3 (L)1ACh0.20.1%0.0
VP2+VC5_l2PN (R)1ACh0.20.1%0.0
ALIN2 (L)1ACh0.20.1%0.0

Outputs

downstream
partner
#NTconns
TRN_VP2
%
Out
CV
VP2_adPN (L)1ACh21218.0%0.0
VP2_l2PN (L)1ACh79.26.7%0.0
VP1m+VP2_lvPN2 (L)4ACh726.1%0.6
lLN2F_a (L)2unc66.85.7%0.2
lLN2X12 (L)6ACh58.85.0%0.2
lLN2F_b (L)2GABA53.24.5%0.2
lLN2T_b (L)2ACh504.3%0.0
lLN2X11 (L)2ACh43.83.7%0.3
lLN2R_a (L)2GABA423.6%0.1
VP1m+VP2_lvPN1 (L)1ACh40.83.5%0.0
v2LN49 (L)2Glu35.53.0%0.3
VP2+Z_lvPN (L)2ACh29.22.5%0.7
lLN2T_a (L)3ACh25.82.2%0.5
CB1048 (L)4Glu252.1%0.3
VP2+VC5_l2PN (L)1ACh242.0%0.0
lLN2X04 (L)2ACh22.21.9%0.3
v2LN38 (R)2ACh20.81.8%0.1
lLN1_bc (L)15ACh181.5%0.7
VP2+VC5_l2PN (R)1ACh171.4%0.0
v2LN33 (L)2ACh151.3%0.0
VP2+_adPN (L)1ACh131.1%0.0
v2LN33 (R)2ACh11.81.0%0.3
lLN2P_c (L)5GABA11.21.0%0.7
v2LNX01 (L)1unc10.50.9%0.0
lLN2X05 (L)2ACh10.50.9%0.0
VP4+VL1_l2PN (L)1ACh9.50.8%0.0
OA-VUMa5 (M)2OA90.8%0.6
lLN1_a (L)1ACh8.20.7%0.0
M_l2PN10t19 (L)2ACh6.50.6%0.8
VP4+VL1_l2PN (R)1ACh6.20.5%0.0
vLN25 (L)2Glu60.5%0.3
M_l2PN10t19 (R)1ACh5.80.5%0.0
v2LN42 (L)2Glu5.50.5%0.3
v2LN38 (L)2ACh50.4%0.2
v2LN42 (R)2Glu4.80.4%0.8
lLN2P_a (L)2GABA4.50.4%0.9
M_l2PNm14 (L)1ACh40.3%0.0
vLN24 (L)2ACh40.3%0.4
VP1d_il2PN (R)1ACh3.80.3%0.0
lLN2P_b (L)3GABA3.80.3%1.1
v2LN31 (L)1unc3.50.3%0.0
TRN_VP23ACh3.50.3%0.4
v2LN32 (L)1Glu3.20.3%0.0
l2LN22 (L)1unc30.3%0.0
M_lvPNm48 (L)2ACh30.3%0.7
DNc02 (R)1unc2.80.2%0.0
v2LN4 (L)2ACh2.80.2%0.1
VP3+_l2PN (R)1ACh2.50.2%0.0
M_lvPNm24 (L)2ACh2.50.2%0.2
l2LN20 (L)3GABA2.50.2%0.4
VP3+_l2PN (L)2ACh2.20.2%0.6
M_l2PNl23 (L)1ACh20.2%0.0
M_smPN6t2 (R)1GABA20.2%0.0
M_spPN4t9 (L)1ACh1.80.1%0.0
M_spPN4t9 (R)1ACh1.50.1%0.0
AL-MBDL1 (L)1ACh1.50.1%0.0
v2LN41 (L)2unc1.50.1%0.7
LHAD4a1 (L)1Glu1.50.1%0.0
M_adPNm3 (L)1ACh1.50.1%0.0
l2LN21 (L)1GABA1.50.1%0.0
CB3417 (L)2unc1.50.1%0.0
M_lPNm11A (R)2ACh1.50.1%0.7
OA-VUMa2 (M)2OA1.50.1%0.3
M_smPN6t2 (L)1GABA1.20.1%0.0
VP1m_l2PN (L)1ACh1.20.1%0.0
M_l2PNm16 (L)2ACh1.20.1%0.2
l2LN23 (L)1GABA10.1%0.0
OA-VPM4 (R)1OA10.1%0.0
M_lPNm11D (L)1ACh10.1%0.0
M_lPNm11A (L)3ACh10.1%0.4
ALBN1 (L)1unc0.80.1%0.0
M_l2PNm15 (L)1ACh0.80.1%0.0
VP1l+VP3_ilPN (L)1ACh0.80.1%0.0
M_l2PNl21 (L)1ACh0.80.1%0.0
DNp32 (L)1unc0.80.1%0.0
l2LN20 (R)2GABA0.80.1%0.3
CB1824 (L)1GABA0.80.1%0.0
M_l2PN3t18 (L)2ACh0.80.1%0.3
v2LN50 (R)1Glu0.50.0%0.0
v2LNX01 (R)1unc0.50.0%0.0
V_l2PN (L)1ACh0.50.0%0.0
M_spPN5t10 (L)1ACh0.50.0%0.0
DNp32 (R)1unc0.50.0%0.0
M_lvPNm25 (L)1ACh0.50.0%0.0
VP1d_il2PN (L)1ACh0.50.0%0.0
ALIN1 (L)1unc0.50.0%0.0
AL-MBDL1 (R)1ACh0.50.0%0.0
DNb05 (L)1ACh0.50.0%0.0
v2LN5 (R)1ACh0.50.0%0.0
v2LN50 (L)2Glu0.50.0%0.0
SAD085 (L)1ACh0.50.0%0.0
lLN2T_c (L)2ACh0.50.0%0.0
lLN10 (L)1unc0.50.0%0.0
M_VPNml66 (L)2GABA0.50.0%0.0
VP1l+_lvPN (L)2ACh0.50.0%0.0
ALIN3 (R)1ACh0.50.0%0.0
PPM1201 (L)1DA0.20.0%0.0
DNae007 (L)1ACh0.20.0%0.0
M_lPNm11C (L)1ACh0.20.0%0.0
Z_lvPNm1 (L)1ACh0.20.0%0.0
MZ_lv2PN (L)1GABA0.20.0%0.0
SMP142 (L)1unc0.20.0%0.0
M_lv2PN9t49_a (L)1GABA0.20.0%0.0
v2LN32 (R)1Glu0.20.0%0.0
VP1m+_lvPN (L)1Glu0.20.0%0.0
HRN_VP41ACh0.20.0%0.0
v2LN37 (L)1Glu0.20.0%0.0
CB0683 (L)1ACh0.20.0%0.0
il3LN6 (L)1GABA0.20.0%0.0
v2LN34F (L)1ACh0.20.0%0.0
lLN13 (L)1GABA0.20.0%0.0
M_lPNm13 (L)1ACh0.20.0%0.0
CB4083 (R)1Glu0.20.0%0.0
v2LN3A1_a (L)1ACh0.20.0%0.0
M_vPNml60 (L)1GABA0.20.0%0.0
lLN8 (L)1GABA0.20.0%0.0
VP4_vPN (L)1GABA0.20.0%0.0
M_vPNml50 (L)1GABA0.20.0%0.0
v2LN30 (L)1unc0.20.0%0.0
lLN2T_e (L)1ACh0.20.0%0.0
V_ilPN (R)1ACh0.20.0%0.0
M_l2PNl20 (L)1ACh0.20.0%0.0
DNp30 (R)1Glu0.20.0%0.0
lLN14 (L)1GABA0.20.0%0.0
M_l2PNm17 (L)1ACh0.20.0%0.0
VM6_adPN (L)1ACh0.20.0%0.0