Male CNS – Cell Type Explorer

TN1a_e(L)[T1]{12A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,755
Total Synapses
Post: 2,053 | Pre: 702
log ratio : -1.55
2,755
Mean Synapses
Post: 2,053 | Pre: 702
log ratio : -1.55
ACh(96.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LTct1,01449.4%-2.8414220.2%
WTct(UTct-T2)(R)24411.9%0.1727439.0%
WTct(UTct-T2)(L)25512.4%-0.3420228.8%
IntTct1768.6%-2.29365.1%
VNC-unspecified1426.9%-2.69223.1%
LegNp(T1)(R)854.1%-3.4181.1%
Ov(L)803.9%-3.1591.3%
LegNp(T1)(L)502.4%-2.8471.0%
Ov(R)60.3%-inf00.0%
HTct(UTct-T3)(L)10.0%1.0020.3%

Connectivity

Inputs

upstream
partner
#NTconns
TN1a_e
%
In
CV
vPR9_c (M)3GABA1175.8%0.3
DNp60 (R)1ACh984.9%0.0
vPR9_a (M)4GABA814.0%0.2
vMS11 (L)7Glu783.9%1.1
vMS11 (R)5Glu713.5%0.9
ANXXX152 (R)1ACh693.4%0.0
vMS12_c (L)2ACh623.1%0.4
DNp45 (L)1ACh592.9%0.0
TN1a_f (L)2ACh592.9%0.0
DNp60 (L)1ACh552.7%0.0
IN08B085_a (L)5ACh462.3%0.9
IN05B037 (R)1GABA432.1%0.0
IN02A004 (L)1Glu381.9%0.0
TN1a_f (R)2ACh371.8%0.2
IN08B085_a (R)4ACh371.8%0.4
DNge079 (L)1GABA361.8%0.0
IN06B063 (R)4GABA351.7%0.3
ANXXX152 (L)1ACh341.7%0.0
vMS12_c (R)2ACh321.6%0.0
vMS12_b (L)1ACh271.3%0.0
AN00A006 (M)2GABA251.2%0.4
IN02A010 (L)1Glu231.1%0.0
pIP10 (L)1ACh221.1%0.0
TN1a_a (L)1ACh201.0%0.0
IN05B037 (L)1GABA201.0%0.0
vPR9_b (M)2GABA201.0%0.2
vMS12_d (L)2ACh190.9%0.8
TN1a_e (R)1ACh180.9%0.0
TN1a_b (L)1ACh180.9%0.0
dPR1 (L)1ACh180.9%0.0
pIP10 (R)1ACh180.9%0.0
vMS12_d (R)2ACh170.8%0.6
vMS12_b (R)1ACh150.7%0.0
TN1a_a (R)1ACh150.7%0.0
DNge079 (R)1GABA150.7%0.0
IN00A043 (M)3GABA150.7%0.6
IN06B063 (L)3GABA150.7%0.6
TN1a_i (L)1ACh120.6%0.0
DNp13 (R)1ACh120.6%0.0
TN1a_d (R)1ACh110.5%0.0
TN1a_d (L)1ACh110.5%0.0
TN1a_g (R)2ACh110.5%0.5
TN1a_g (L)2ACh110.5%0.3
IN05B051 (L)2GABA110.5%0.1
IN08A003 (L)1Glu100.5%0.0
TN1a_b (R)1ACh100.5%0.0
IN03B024 (L)1GABA100.5%0.0
IN03B024 (R)1GABA100.5%0.0
IN05B066 (R)1GABA90.4%0.0
AN08B102 (R)1ACh90.4%0.0
DNge136 (L)1GABA90.4%0.0
IN12A025 (L)2ACh90.4%0.1
TN1a_c (R)1ACh80.4%0.0
DNp67 (R)1ACh80.4%0.0
DNp45 (R)1ACh80.4%0.0
vMS12_a (R)2ACh80.4%0.5
IN06B036 (R)2GABA80.4%0.2
dMS5 (R)1ACh70.3%0.0
IN06B024 (L)1GABA70.3%0.0
DNge136 (R)2GABA70.3%0.7
IN00A057 (M)4GABA70.3%0.7
TN1a_c (L)1ACh60.3%0.0
DNg74_b (R)1GABA60.3%0.0
EA06B010 (L)1Glu60.3%0.0
DNg24 (L)1GABA60.3%0.0
DNg108 (L)1GABA60.3%0.0
IN05B070 (R)2GABA60.3%0.3
IN06B059 (L)3GABA60.3%0.4
TN1a_i (R)1ACh50.2%0.0
IN17A032 (R)1ACh50.2%0.0
IN08B003 (R)1GABA50.2%0.0
IN10B006 (L)1ACh50.2%0.0
dMS5 (L)1ACh50.2%0.0
DNp67 (L)1ACh50.2%0.0
DNg74_b (L)1GABA50.2%0.0
IN12A042 (L)3ACh50.2%0.6
IN06B036 (L)2GABA50.2%0.2
AN08B031 (L)2ACh50.2%0.2
IN17B004 (L)1GABA40.2%0.0
IN05B064_b (R)1GABA40.2%0.0
TN1a_h (R)1ACh40.2%0.0
IN02A004 (R)1Glu40.2%0.0
IN11A001 (R)1GABA40.2%0.0
IN11A001 (L)1GABA40.2%0.0
DNpe050 (L)1ACh40.2%0.0
DNg108 (R)1GABA40.2%0.0
pIP1 (L)1ACh40.2%0.0
IN06B043 (L)2GABA40.2%0.5
vMS12_a (L)2ACh40.2%0.0
IN12A044 (L)2ACh40.2%0.0
IN12A042 (R)3ACh40.2%0.4
IN08B051_c (L)2ACh40.2%0.0
SNpp063ACh40.2%0.4
IN06B066 (R)1GABA30.1%0.0
IN13B015 (L)1GABA30.1%0.0
IN13B015 (R)1GABA30.1%0.0
IN00A044 (M)1GABA30.1%0.0
IN08B068 (R)1ACh30.1%0.0
IN03B053 (R)1GABA30.1%0.0
IN17A030 (R)1ACh30.1%0.0
IN08A016 (R)1Glu30.1%0.0
IN06B030 (R)1GABA30.1%0.0
IN06B019 (L)1GABA30.1%0.0
IN08A003 (R)1Glu30.1%0.0
DNg24 (R)1GABA30.1%0.0
AN17B002 (R)1GABA30.1%0.0
AN17B002 (L)1GABA30.1%0.0
ANXXX002 (R)1GABA30.1%0.0
DNg27 (L)1Glu30.1%0.0
DNp13 (L)1ACh30.1%0.0
DNp36 (R)1Glu30.1%0.0
aSP22 (L)1ACh30.1%0.0
IN00A047 (M)2GABA30.1%0.3
IN11B024_c (L)2GABA30.1%0.3
IN11A006 (R)2ACh30.1%0.3
IN12B002 (R)2GABA30.1%0.3
AN08B074 (R)2ACh30.1%0.3
IN12A044 (R)3ACh30.1%0.0
AN08B061 (R)3ACh30.1%0.0
IN12A031 (L)1ACh20.1%0.0
IN06B072 (R)1GABA20.1%0.0
IN05B064_b (L)1GABA20.1%0.0
IN05B074 (L)1GABA20.1%0.0
IN08B083_d (L)1ACh20.1%0.0
dMS2 (L)1ACh20.1%0.0
IN00A034 (M)1GABA20.1%0.0
IN05B072_c (L)1GABA20.1%0.0
IN12A019_a (L)1ACh20.1%0.0
IN17A040 (L)1ACh20.1%0.0
IN12A019_c (L)1ACh20.1%0.0
IN12A030 (L)1ACh20.1%0.0
IN17A032 (L)1ACh20.1%0.0
IN17B004 (R)1GABA20.1%0.0
dPR1 (R)1ACh20.1%0.0
AN27X004 (L)1HA20.1%0.0
DNge120 (R)1Glu20.1%0.0
AN08B084 (R)1ACh20.1%0.0
AN05B048 (R)1GABA20.1%0.0
DNg55 (M)1GABA20.1%0.0
DNge082 (R)1ACh20.1%0.0
DNg105 (R)1GABA20.1%0.0
DNge099 (R)1Glu20.1%0.0
DNp36 (L)1Glu20.1%0.0
IN12A030 (R)2ACh20.1%0.0
IN06B047 (L)2GABA20.1%0.0
IN00A041 (M)2GABA20.1%0.0
IN00A038 (M)2GABA20.1%0.0
IN08B003 (L)1GABA10.0%0.0
IN12A009 (L)1ACh10.0%0.0
IN12A037 (L)1ACh10.0%0.0
IN06B064 (R)1GABA10.0%0.0
IN11B013 (L)1GABA10.0%0.0
IN04B019 (L)1ACh10.0%0.0
IN05B073 (L)1GABA10.0%0.0
IN19A120 (L)1GABA10.0%0.0
IN05B074 (R)1GABA10.0%0.0
IN06B080 (L)1GABA10.0%0.0
IN06B072 (L)1GABA10.0%0.0
IN08B051_c (R)1ACh10.0%0.0
vMS12_e (R)1ACh10.0%0.0
IN00A056 (M)1GABA10.0%0.0
vPR6 (L)1ACh10.0%0.0
IN07B054 (L)1ACh10.0%0.0
IN03B053 (L)1GABA10.0%0.0
IN00A032 (M)1GABA10.0%0.0
IN17A113,IN17A119 (L)1ACh10.0%0.0
IN06B056 (L)1GABA10.0%0.0
IN05B061 (R)1GABA10.0%0.0
dMS2 (R)1ACh10.0%0.0
IN18B042 (L)1ACh10.0%0.0
IN00A055 (M)1GABA10.0%0.0
IN05B057 (L)1GABA10.0%0.0
IN13B104 (R)1GABA10.0%0.0
IN17A029 (R)1ACh10.0%0.0
IN00A048 (M)1GABA10.0%0.0
INXXX355 (R)1GABA10.0%0.0
IN06B024 (R)1GABA10.0%0.0
IN17A030 (L)1ACh10.0%0.0
IN17B015 (L)1GABA10.0%0.0
IN17B003 (R)1GABA10.0%0.0
IN05B073 (R)1GABA10.0%0.0
IN17B015 (R)1GABA10.0%0.0
IN00A016 (M)1GABA10.0%0.0
IN10B006 (R)1ACh10.0%0.0
INXXX038 (L)1ACh10.0%0.0
IN19A017 (L)1ACh10.0%0.0
IN08B004 (L)1ACh10.0%0.0
IN11B004 (L)1GABA10.0%0.0
DNp42 (R)1ACh10.0%0.0
AN27X004 (R)1HA10.0%0.0
IN05B070 (L)1GABA10.0%0.0
AN05B048 (L)1GABA10.0%0.0
AN08B061 (L)1ACh10.0%0.0
AN08B110 (R)1ACh10.0%0.0
AN08B047 (L)1ACh10.0%0.0
AN08B031 (R)1ACh10.0%0.0
EA06B010 (R)1Glu10.0%0.0
AN08B089 (L)1ACh10.0%0.0
AN08B096 (R)1ACh10.0%0.0
IN27X001 (L)1GABA10.0%0.0
vMS16 (L)1unc10.0%0.0
AN08B074 (L)1ACh10.0%0.0
AN08B084 (L)1ACh10.0%0.0
dMS9 (L)1ACh10.0%0.0
AN05B006 (L)1GABA10.0%0.0
AN27X003 (R)1unc10.0%0.0
AN18B001 (L)1ACh10.0%0.0
AN27X016 (R)1Glu10.0%0.0
DNg52 (L)1GABA10.0%0.0
DNpe042 (R)1ACh10.0%0.0
DNg101 (L)1ACh10.0%0.0
DNp43 (L)1ACh10.0%0.0
DNge138 (M)1unc10.0%0.0
DNp103 (R)1ACh10.0%0.0
AN02A002 (R)1Glu10.0%0.0
aSP22 (R)1ACh10.0%0.0

Outputs

downstream
partner
#NTconns
TN1a_e
%
Out
CV
dMS2 (L)9ACh44320.8%0.6
dMS2 (R)9ACh40719.1%0.8
vPR9_a (M)4GABA1718.0%0.2
vPR9_c (M)3GABA833.9%0.2
IN11B004 (L)1GABA773.6%0.0
IN11B004 (R)1GABA723.4%0.0
IN11B024_b (L)2GABA532.5%0.1
IN11B024_b (R)2GABA532.5%0.1
TN1a_f (L)2ACh512.4%0.4
IN11B024_c (R)2GABA482.3%0.5
IN11B024_c (L)2GABA482.3%0.0
TN1a_f (R)2ACh472.2%0.1
IN17B001 (L)1GABA452.1%0.0
IN17B001 (R)1GABA401.9%0.0
IN12A002 (L)1ACh401.9%0.0
IN11B024_a (L)1GABA271.3%0.0
vMS11 (L)5Glu271.3%0.7
vPR9_b (M)2GABA200.9%0.6
TN1a_d (R)1ACh190.9%0.0
IN12A002 (R)1ACh190.9%0.0
MNwm35 (L)1unc180.8%0.0
IN12A042 (R)4ACh180.8%0.3
TN1a_a (R)1ACh170.8%0.0
vMS11 (R)6Glu160.8%0.4
TN1a_a (L)1ACh150.7%0.0
TN1a_d (L)1ACh150.7%0.0
ps2 MN (R)1unc150.7%0.0
MNwm35 (R)1unc140.7%0.0
hg3 MN (R)1GABA120.6%0.0
IN12A042 (L)3ACh120.6%0.6
ps2 MN (L)1unc110.5%0.0
TN1a_b (L)1ACh110.5%0.0
TN1a_c (R)1ACh100.5%0.0
TN1a_e (R)1ACh100.5%0.0
TN1a_g (R)2ACh80.4%0.8
TN1a_g (L)2ACh70.3%0.4
IN03B057 (R)2GABA60.3%0.3
IN12A055 (R)1ACh50.2%0.0
IN03B057 (L)1GABA50.2%0.0
TN1a_b (R)1ACh50.2%0.0
IN11A004 (L)1ACh50.2%0.0
dPR1 (L)1ACh50.2%0.0
dMS9 (R)1ACh40.2%0.0
IN06B036 (R)3GABA40.2%0.4
AN08B061 (L)3ACh40.2%0.4
IN12A055 (L)1ACh30.1%0.0
IN08B051_e (R)1ACh30.1%0.0
IN08B051_c (L)1ACh30.1%0.0
TN1a_i (L)1ACh30.1%0.0
IN06B013 (L)1GABA30.1%0.0
hg4 MN (L)1unc30.1%0.0
IN16B099 (R)1Glu20.1%0.0
IN01A078 (R)1ACh20.1%0.0
IN08A011 (L)1Glu20.1%0.0
TN1a_c (L)1ACh20.1%0.0
IN11A004 (R)1ACh20.1%0.0
IN11B005 (L)1GABA20.1%0.0
IN03B024 (L)1GABA20.1%0.0
IN03B024 (R)1GABA20.1%0.0
hg3 MN (L)1GABA20.1%0.0
IN06B013 (R)1GABA20.1%0.0
dPR1 (R)1ACh20.1%0.0
hg1 MN (L)1ACh20.1%0.0
AN08B103 (L)1ACh20.1%0.0
IN11B014 (L)2GABA20.1%0.0
IN12A044 (L)2ACh20.1%0.0
IN11A006 (L)2ACh20.1%0.0
AN08B047 (L)2ACh20.1%0.0
vMS12_d (L)1ACh10.0%0.0
IN12A037 (R)1ACh10.0%0.0
IN06B059 (L)1GABA10.0%0.0
IN17A091 (L)1ACh10.0%0.0
IN03B058 (R)1GABA10.0%0.0
IN03B065 (L)1GABA10.0%0.0
IN03B065 (R)1GABA10.0%0.0
IN08B085_a (L)1ACh10.0%0.0
vPR6 (R)1ACh10.0%0.0
IN06B043 (L)1GABA10.0%0.0
IN11A006 (R)1ACh10.0%0.0
IN05B072_c (L)1GABA10.0%0.0
vMS12_a (R)1ACh10.0%0.0
IN05B051 (L)1GABA10.0%0.0
IN11A002 (L)1ACh10.0%0.0
IN05B057 (L)1GABA10.0%0.0
IN13B104 (R)1GABA10.0%0.0
IN17A027 (L)1ACh10.0%0.0
IN13B104 (L)1GABA10.0%0.0
IN08B035 (L)1ACh10.0%0.0
IN11A002 (R)1ACh10.0%0.0
IN18B017 (R)1ACh10.0%0.0
ps1 MN (L)1unc10.0%0.0
IN09A002 (L)1GABA10.0%0.0
IN11A001 (L)1GABA10.0%0.0
IN19B008 (L)1ACh10.0%0.0
AN08B110 (R)1ACh10.0%0.0
AN08B097 (L)1ACh10.0%0.0
IN27X001 (L)1GABA10.0%0.0
AN08B074 (R)1ACh10.0%0.0
ANXXX002 (R)1GABA10.0%0.0
DNg27 (L)1Glu10.0%0.0