Male CNS – Cell Type Explorer

SNxx31(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,006
Total Synapses
Post: 298 | Pre: 708
log ratio : 1.25
1,006
Mean Synapses
Post: 298 | Pre: 708
log ratio : 1.25
5-HT(83.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm13746.0%1.5540056.5%
IntTct6521.8%1.5018426.0%
VNC-unspecified5016.8%0.26608.5%
LTct134.4%1.34334.7%
LegNp(T3)(R)134.4%0.39172.4%
Ov(R)62.0%0.87111.6%
PDMN(R)144.7%-2.2230.4%

Connectivity

Inputs

upstream
partner
#NTconns
SNxx31
%
In
CV
DNg70 (R)1GABA7629.5%0.0
DNg70 (L)1GABA6224.0%0.0
SNpp2365-HT218.1%0.5
ANXXX202 (R)3Glu103.9%0.5
DNg98 (R)1GABA93.5%0.0
SNta02,SNta096ACh93.5%0.5
SAxx013ACh72.7%0.8
SNta101ACh41.6%0.0
IN09A005 (R)2unc41.6%0.5
SNxx203ACh31.2%0.0
EN00B008 (M)1unc20.8%0.0
ANXXX033 (R)1ACh20.8%0.0
AN05B097 (L)1ACh20.8%0.0
DNpe036 (L)1ACh20.8%0.0
DNg33 (R)1ACh20.8%0.0
DNge150 (M)1unc20.8%0.0
AN05B004 (R)1GABA20.8%0.0
DNg80 (L)1Glu20.8%0.0
IN09A005 (L)2unc20.8%0.0
INXXX295 (L)2unc20.8%0.0
MNad21 (R)1unc10.4%0.0
IN23B072 (L)1ACh10.4%0.0
MNad54 (L)1unc10.4%0.0
MNad54 (R)1unc10.4%0.0
INXXX245 (L)1ACh10.4%0.0
SNta021ACh10.4%0.0
MNad09 (L)1unc10.4%0.0
INXXX233 (R)1GABA10.4%0.0
INXXX204 (L)1GABA10.4%0.0
INXXX472 (L)1GABA10.4%0.0
IN23B016 (R)1ACh10.4%0.0
SNta131ACh10.4%0.0
IN27X002 (L)1unc10.4%0.0
EA27X006 (R)1unc10.4%0.0
AN09B018 (L)1ACh10.4%0.0
AN05B096 (R)1ACh10.4%0.0
AN08B113 (R)1ACh10.4%0.0
AN09A005 (R)1unc10.4%0.0
ANXXX202 (L)1Glu10.4%0.0
SNxx27,SNxx291unc10.4%0.0
ANXXX084 (R)1ACh10.4%0.0
AN01A021 (R)1ACh10.4%0.0
DNpe036 (R)1ACh10.4%0.0
AN05B100 (R)1ACh10.4%0.0
AN10B015 (R)1ACh10.4%0.0
ANXXX136 (R)1ACh10.4%0.0
AN27X003 (R)1unc10.4%0.0
DNpe035 (R)1ACh10.4%0.0
DNp25 (L)1GABA10.4%0.0
DNge137 (R)1ACh10.4%0.0
DNp48 (R)1ACh10.4%0.0
DNg80 (R)1Glu10.4%0.0
DNg98 (L)1GABA10.4%0.0

Outputs

downstream
partner
#NTconns
SNxx31
%
Out
CV
ANXXX202 (R)5Glu1298.2%1.2
AN27X017 (L)1ACh946.0%0.0
AN27X017 (R)1ACh764.8%0.0
ANXXX136 (R)1ACh613.9%0.0
MNad25 (R)2unc563.6%0.6
ANXXX202 (L)3Glu553.5%1.3
ANXXX136 (L)1ACh543.4%0.0
MNad07 (L)3unc513.2%0.5
IN23B016 (R)1ACh503.2%0.0
ENXXX226 (L)2unc503.2%0.8
IN23B016 (L)1ACh372.4%0.0
MNad25 (L)2unc372.4%0.6
MNad03 (R)3unc372.4%0.7
SAxx012ACh312.0%0.9
AN05B004 (R)1GABA291.8%0.0
MNad03 (L)2unc281.8%0.3
INXXX249 (L)1ACh271.7%0.0
IN27X007 (R)1unc261.7%0.0
ENXXX226 (R)3unc261.7%1.3
MNad13 (L)4unc261.7%0.5
INXXX233 (R)1GABA241.5%0.0
INXXX233 (L)1GABA231.5%0.0
AN27X024 (R)1Glu221.4%0.0
AN27X024 (L)1Glu221.4%0.0
AN05B004 (L)1GABA211.3%0.0
INXXX245 (R)1ACh201.3%0.0
INXXX249 (R)1ACh181.1%0.0
MNad07 (R)3unc171.1%0.4
INXXX204 (R)1GABA140.9%0.0
EN00B008 (M)3unc140.9%1.0
AN09B037 (R)2unc140.9%0.4
IN17A072 (R)1ACh120.8%0.0
INXXX418 (L)2GABA120.8%0.8
AN05B096 (R)1ACh110.7%0.0
AN10B015 (L)1ACh110.7%0.0
INXXX418 (R)2GABA110.7%0.5
EN00B013 (M)3unc100.6%0.5
MNad18,MNad27 (L)3unc90.6%0.3
INXXX351 (R)1GABA80.5%0.0
ANXXX033 (L)1ACh80.5%0.0
SNpp2365-HT80.5%0.4
ANXXX254 (R)1ACh70.4%0.0
DNge150 (M)1unc70.4%0.0
MNad13 (R)2unc70.4%0.1
MNad18,MNad27 (R)3unc70.4%0.2
INXXX204 (L)1GABA60.4%0.0
IN18B026 (R)1ACh60.4%0.0
AN27X013 (L)1unc60.4%0.0
AN10B015 (R)1ACh60.4%0.0
DNg80 (L)1Glu60.4%0.0
AN09B037 (L)2unc60.4%0.0
INXXX326 (L)1unc50.3%0.0
INXXX245 (L)1ACh50.3%0.0
MNad23 (R)1unc50.3%0.0
AN27X015 (R)1Glu50.3%0.0
AN05B096 (L)1ACh50.3%0.0
ANXXX150 (L)1ACh50.3%0.0
DNg70 (R)1GABA50.3%0.0
SNta02,SNta094ACh50.3%0.3
IN18B026 (L)1ACh40.3%0.0
IN00A001 (M)1unc40.3%0.0
AN05B101 (L)1GABA40.3%0.0
AN05B101 (R)1GABA40.3%0.0
AN09B018 (L)2ACh40.3%0.5
AN09B032 (L)2Glu40.3%0.5
INXXX261 (L)2Glu40.3%0.0
INXXX351 (L)1GABA30.2%0.0
EN00B015 (M)1unc30.2%0.0
IN10B010 (R)1ACh30.2%0.0
EA27X006 (R)1unc30.2%0.0
MNad21 (L)1unc30.2%0.0
AN08B098 (R)1ACh30.2%0.0
DNpe036 (L)1ACh30.2%0.0
AN27X009 (L)1ACh30.2%0.0
DNge151 (M)1unc30.2%0.0
DNg22 (L)1ACh30.2%0.0
DNg70 (L)1GABA30.2%0.0
DNg80 (R)1Glu30.2%0.0
AN08B113 (R)2ACh30.2%0.3
INXXX386 (R)2Glu30.2%0.3
IN09A005 (L)2unc30.2%0.3
SNta132ACh30.2%0.3
AN09A005 (L)2unc30.2%0.3
IN10B010 (L)1ACh20.1%0.0
IN00A035 (M)1GABA20.1%0.0
IN09A005 (R)1unc20.1%0.0
IN17A077 (R)1ACh20.1%0.0
ENXXX128 (L)1unc20.1%0.0
INXXX441 (R)1unc20.1%0.0
MNad23 (L)1unc20.1%0.0
INXXX441 (L)1unc20.1%0.0
IN09B018 (L)1Glu20.1%0.0
INXXX261 (R)1Glu20.1%0.0
INXXX184 (L)1ACh20.1%0.0
ANXXX338 (R)1Glu20.1%0.0
ANXXX308 (L)1ACh20.1%0.0
ANXXX380 (R)1ACh20.1%0.0
DNpe007 (R)1ACh20.1%0.0
ANXXX150 (R)1ACh20.1%0.0
AN05B100 (L)1ACh20.1%0.0
AN09A005 (R)1unc20.1%0.0
DNpe036 (R)1ACh20.1%0.0
AN05B097 (R)1ACh20.1%0.0
ANXXX139 (L)1GABA20.1%0.0
DNg22 (R)1ACh20.1%0.0
MNad21 (R)2unc20.1%0.0
SNxx202ACh20.1%0.0
EN00B010 (M)2unc20.1%0.0
MNad09 (R)2unc20.1%0.0
IN19B040 (R)2ACh20.1%0.0
INXXX244 (L)1unc10.1%0.0
INXXX364 (L)1unc10.1%0.0
SNxx321unc10.1%0.0
EN00B023 (M)1unc10.1%0.0
MNad54 (L)1unc10.1%0.0
IN05B091 (R)1GABA10.1%0.0
INXXX295 (R)1unc10.1%0.0
INXXX295 (L)1unc10.1%0.0
IN05B091 (L)1GABA10.1%0.0
MNad09 (L)1unc10.1%0.0
SNxx3115-HT10.1%0.0
EN00B012 (M)1unc10.1%0.0
IN00A043 (M)1GABA10.1%0.0
IN13B017 (R)1GABA10.1%0.0
INXXX386 (L)1Glu10.1%0.0
IN19B040 (L)1ACh10.1%0.0
MNad22 (L)1unc10.1%0.0
INXXX332 (R)1GABA10.1%0.0
INXXX377 (L)1Glu10.1%0.0
INXXX474 (L)1GABA10.1%0.0
IN06B073 (R)1GABA10.1%0.0
INXXX378 (L)1Glu10.1%0.0
EA27X006 (L)1unc10.1%0.0
EN00B016 (M)1unc10.1%0.0
IN00A017 (M)1unc10.1%0.0
IN05B033 (L)1GABA10.1%0.0
EN00B002 (M)1unc10.1%0.0
EN00B001 (M)1unc10.1%0.0
INXXX077 (R)1ACh10.1%0.0
AN09B032 (R)1Glu10.1%0.0
ANXXX308 (R)1ACh10.1%0.0
AN27X018 (L)1Glu10.1%0.0
LN-DN21unc10.1%0.0
ANXXX169 (R)1Glu10.1%0.0
ANXXX099 (L)1ACh10.1%0.0
ANXXX214 (L)1ACh10.1%0.0
DNp58 (L)1ACh10.1%0.0
AN05B005 (R)1GABA10.1%0.0
AN05B098 (L)1ACh10.1%0.0
AN05B097 (L)1ACh10.1%0.0
EA00B007 (M)1unc10.1%0.0
AN27X018 (R)1Glu10.1%0.0
DNg33 (R)1ACh10.1%0.0
DNg27 (R)1Glu10.1%0.0
DNg98 (R)1GABA10.1%0.0
DNpe053 (L)1ACh10.1%0.0