Male CNS – Cell Type Explorer

SNxx28(L)

6
Total Neurons
Right: 3 | Left: 3
log ratio : 0.00
1,528
Total Synapses
Post: 451 | Pre: 1,077
log ratio : 1.26
509.3
Mean Synapses
Post: 150.3 | Pre: 359
log ratio : 1.26
ACh(96.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)33975.2%1.3385279.1%
Ov(L)8819.5%1.1319317.9%
VNC-unspecified61.3%1.00121.1%
NTct(UTct-T1)(L)10.2%3.81141.3%
ADMN(L)81.8%-3.0010.1%
LegNp(T2)(L)40.9%0.3250.5%
PDMN(L)51.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNxx28
%
In
CV
IN19A043 (L)2GABA52.739.6%0.3
IN19A057 (L)1GABA1813.5%0.0
SNxx265ACh6.75.0%0.7
IN03B053 (L)2GABA6.34.8%0.2
IN05B016 (R)2GABA53.8%0.2
IN19A049 (L)1GABA3.72.8%0.0
SNxx283ACh3.72.8%0.3
IN03B058 (L)1GABA32.3%0.0
IN03B065 (L)2GABA32.3%0.3
IN05B016 (L)1GABA2.72.0%0.0
SNpp163ACh2.72.0%0.9
IN17A060 (L)1Glu2.31.8%0.0
SNpp131ACh21.5%0.0
IN03B069 (L)2GABA1.31.0%0.5
IN17B004 (L)1GABA1.31.0%0.0
IN03B073 (L)1GABA1.31.0%0.0
IN03B089 (L)1GABA10.8%0.0
AN06B031 (R)1GABA10.8%0.0
IN17B001 (L)1GABA0.70.5%0.0
AN17B005 (L)1GABA0.70.5%0.0
SNpp421ACh0.70.5%0.0
IN13A008 (L)1GABA0.70.5%0.0
IN05B001 (L)1GABA0.70.5%0.0
AN05B096 (L)1ACh0.70.5%0.0
IN06B024 (R)1GABA0.70.5%0.0
DNge150 (M)1unc0.70.5%0.0
SNta02,SNta091ACh0.30.3%0.0
IN11B021_b (L)1GABA0.30.3%0.0
AN27X009 (L)1ACh0.30.3%0.0
IN11B021_c (L)1GABA0.30.3%0.0
IN16B068_c (L)1Glu0.30.3%0.0
IN06A054 (R)1GABA0.30.3%0.0
EA27X006 (L)1unc0.30.3%0.0
IN10B023 (R)1ACh0.30.3%0.0
IN06B013 (R)1GABA0.30.3%0.0
vMS16 (L)1unc0.30.3%0.0
DNg26 (R)1unc0.30.3%0.0
SNta071ACh0.30.3%0.0
IN03B078 (L)1GABA0.30.3%0.0
IN23B040 (R)1ACh0.30.3%0.0
IN27X007 (L)1unc0.30.3%0.0
INXXX063 (R)1GABA0.30.3%0.0
AN09A005 (L)1unc0.30.3%0.0
AN27X008 (R)1HA0.30.3%0.0
AN09B029 (R)1ACh0.30.3%0.0
SNpp321ACh0.30.3%0.0
INXXX045 (L)1unc0.30.3%0.0
SNpp141ACh0.30.3%0.0
SNpp071ACh0.30.3%0.0
IN03B043 (L)1GABA0.30.3%0.0
IN17B001 (R)1GABA0.30.3%0.0
IN19A056 (L)1GABA0.30.3%0.0
AN27X004 (R)1HA0.30.3%0.0
AN17B009 (L)1GABA0.30.3%0.0
DNd03 (L)1Glu0.30.3%0.0
DNa08 (R)1ACh0.30.3%0.0

Outputs

downstream
partner
#NTconns
SNxx28
%
Out
CV
IN10B023 (R)1ACh889.2%0.0
IN03B052 (L)3GABA71.37.5%0.3
IN03B053 (L)2GABA646.7%0.2
IN17B004 (L)2GABA49.35.2%0.2
IN05B028 (R)3GABA44.34.7%1.2
IN03B058 (L)9GABA343.6%0.6
IN05B028 (L)2GABA33.33.5%1.0
IN06A037 (L)1GABA313.3%0.0
AN06B031 (R)1GABA30.33.2%0.0
IN13A013 (L)1GABA26.72.8%0.0
IN19B067 (L)6ACh24.32.6%0.5
IN10B023 (L)1ACh21.72.3%0.0
IN19A043 (L)2GABA20.32.1%0.3
IN19B043 (L)5ACh20.32.1%0.7
IN03B005 (L)1unc16.71.7%0.0
IN19A057 (L)1GABA16.71.7%0.0
IN05B001 (L)1GABA16.31.7%0.0
IN06B013 (R)2GABA14.31.5%0.9
IN03B049 (L)1GABA13.71.4%0.0
IN03B089 (L)8GABA13.31.4%0.6
IN17A099 (L)2ACh121.3%0.6
IN03B056 (L)1GABA11.71.2%0.0
IN19A026 (L)1GABA80.8%0.0
AN17B011 (L)1GABA7.70.8%0.0
IN03B069 (L)3GABA7.70.8%0.7
IN05B010 (R)1GABA70.7%0.0
IN17B001 (L)1GABA70.7%0.0
DNge150 (M)1unc5.70.6%0.0
IN03B046 (L)2GABA5.30.6%0.0
iii3 MN (L)1unc50.5%0.0
AN17B016 (L)1GABA50.5%0.0
IN03B008 (L)1unc50.5%0.0
AN19B024 (L)1ACh50.5%0.0
IN19B080 (L)3ACh4.70.5%1.1
IN03B052 (R)1GABA4.70.5%0.0
IN03B058 (R)4GABA4.30.5%0.3
IN11A032_e (L)1ACh40.4%0.0
IN19B067 (R)3ACh40.4%0.7
IN03B057 (L)2GABA40.4%0.5
IN05B016 (R)1GABA3.70.4%0.0
AN17B005 (L)1GABA3.70.4%0.0
DNa08 (L)1ACh3.70.4%0.0
SNxx282ACh3.70.4%0.1
IN19A049 (L)1GABA3.30.3%0.0
IN19B056 (R)1ACh3.30.3%0.0
IN06B013 (L)1GABA3.30.3%0.0
IN13B008 (R)1GABA3.30.3%0.0
IN05B016 (L)1GABA3.30.3%0.0
IN07B031 (L)2Glu3.30.3%0.6
IN17B015 (L)1GABA3.30.3%0.0
AN17B009 (L)1GABA3.30.3%0.0
IN19B043 (R)3ACh3.30.3%0.6
IN17A060 (L)1Glu3.30.3%0.0
IN13A022 (L)1GABA30.3%0.0
AN17B011 (R)1GABA30.3%0.0
IN19B085 (L)1ACh30.3%0.0
INXXX119 (R)1GABA2.70.3%0.0
tp2 MN (L)1unc2.70.3%0.0
SNxx263ACh2.70.3%0.6
IN08A011 (L)5Glu2.70.3%0.5
IN16B062 (L)1Glu2.30.2%0.0
IN19A056 (L)1GABA2.30.2%0.0
IN05B001 (R)1GABA2.30.2%0.0
IN07B031 (R)2Glu2.30.2%0.7
hg4 MN (L)1unc20.2%0.0
IN23B040 (R)2ACh20.2%0.7
IN03B094 (L)1GABA20.2%0.0
tpn MN (L)1unc20.2%0.0
IN06A033 (L)1GABA20.2%0.0
IN17A043, IN17A046 (L)2ACh20.2%0.0
vMS11 (L)3Glu20.2%0.4
AN17B002 (L)1GABA20.2%0.0
IN19B064 (R)1ACh1.70.2%0.0
IN17A118 (L)1ACh1.70.2%0.0
IN03B078 (L)1GABA1.70.2%0.0
IN11A006 (L)1ACh1.70.2%0.0
IN01A031 (R)1ACh1.70.2%0.0
IN17A109, IN17A120 (L)2ACh1.70.2%0.2
IN11A004 (L)1ACh1.70.2%0.0
DNa08 (R)1ACh1.70.2%0.0
AN07B071_a (L)1ACh1.30.1%0.0
IN23B066 (L)1ACh1.30.1%0.0
IN10B058 (L)1ACh1.30.1%0.0
IN09B005 (L)1Glu1.30.1%0.0
IN19A042 (L)1GABA1.30.1%0.0
IN00A045 (M)1GABA1.30.1%0.0
IN03B008 (R)1unc1.30.1%0.0
AN19B001 (R)1ACh1.30.1%0.0
IN06B024 (R)1GABA1.30.1%0.0
IN09B005 (R)1Glu1.30.1%0.0
IN02A042 (L)1Glu1.30.1%0.0
AN12B089 (R)1GABA1.30.1%0.0
IN06B069 (R)2GABA1.30.1%0.5
IN16B069 (L)2Glu1.30.1%0.5
DVMn 1a-c (L)3unc1.30.1%0.4
IN08B104 (L)1ACh10.1%0.0
SNpp131ACh10.1%0.0
IN19B077 (L)1ACh10.1%0.0
IN16B068_b (L)1Glu10.1%0.0
IN16B068_c (L)1Glu10.1%0.0
IN08B078 (R)1ACh10.1%0.0
AN07B071_b (L)1ACh10.1%0.0
IN03B089 (R)1GABA10.1%0.0
IN09A023 (L)1GABA10.1%0.0
IN00A025 (M)1GABA10.1%0.0
IN19B086 (R)1ACh10.1%0.0
IN19B040 (R)1ACh10.1%0.0
IN09B008 (R)1Glu10.1%0.0
IN03B070 (L)2GABA10.1%0.3
IN19B058 (L)1ACh10.1%0.0
IN17B001 (R)1GABA10.1%0.0
IN19B056 (L)1ACh10.1%0.0
IN17A059,IN17A063 (L)2ACh10.1%0.3
IN06B019 (R)1GABA10.1%0.0
AN05B096 (L)1ACh10.1%0.0
IN07B054 (L)1ACh10.1%0.0
IN19B045 (L)1ACh10.1%0.0
dMS5 (R)1ACh0.70.1%0.0
IN06B081 (L)1GABA0.70.1%0.0
IN03B073 (L)1GABA0.70.1%0.0
IN08B075 (R)1ACh0.70.1%0.0
MNad26 (L)1unc0.70.1%0.0
MNwm36 (L)1unc0.70.1%0.0
AN27X015 (L)1Glu0.70.1%0.0
IN11A032_a (L)1ACh0.70.1%0.0
IN19B103 (R)1ACh0.70.1%0.0
IN08A040 (L)1Glu0.70.1%0.0
IN19B041 (L)1ACh0.70.1%0.0
IN11A025 (L)1ACh0.70.1%0.0
IN19B040 (L)1ACh0.70.1%0.0
AN27X008 (L)1HA0.70.1%0.0
AN09B030 (L)1Glu0.70.1%0.0
IN03B065 (L)1GABA0.70.1%0.0
IN08B085_a (L)1ACh0.70.1%0.0
IN19B045, IN19B052 (L)1ACh0.70.1%0.0
IN17B003 (L)1GABA0.70.1%0.0
SNta02,SNta092ACh0.70.1%0.0
IN07B048 (L)2ACh0.70.1%0.0
IN16B099 (L)1Glu0.70.1%0.0
IN03B071 (L)2GABA0.70.1%0.0
IN11B025 (L)2GABA0.70.1%0.0
IN19B041 (R)1ACh0.70.1%0.0
IN23B066 (R)2ACh0.70.1%0.0
IN19B086 (L)2ACh0.70.1%0.0
IN12A009 (L)1ACh0.30.0%0.0
IN06B043 (R)1GABA0.30.0%0.0
IN19B077 (R)1ACh0.30.0%0.0
IN03B091 (L)1GABA0.30.0%0.0
IN06A105 (R)1GABA0.30.0%0.0
IN06A120_b (R)1GABA0.30.0%0.0
IN06B074 (R)1GABA0.30.0%0.0
IN19B066 (L)1ACh0.30.0%0.0
IN06B017 (R)1GABA0.30.0%0.0
IN06B077 (R)1GABA0.30.0%0.0
IN19A056 (R)1GABA0.30.0%0.0
IN13B104 (L)1GABA0.30.0%0.0
IN17A074 (L)1ACh0.30.0%0.0
IN12B016 (L)1GABA0.30.0%0.0
INXXX008 (R)1unc0.30.0%0.0
EN00B001 (M)1unc0.30.0%0.0
IN06B016 (R)1GABA0.30.0%0.0
AN07B071_d (L)1ACh0.30.0%0.0
AN19B024 (R)1ACh0.30.0%0.0
DNg59 (R)1GABA0.30.0%0.0
DNd03 (L)1Glu0.30.0%0.0
IN03B092 (L)1GABA0.30.0%0.0
IN06B063 (L)1GABA0.30.0%0.0
IN12A052_a (L)1ACh0.30.0%0.0
IN06B078 (L)1GABA0.30.0%0.0
IN19B062 (R)1ACh0.30.0%0.0
DVMn 2a, b (L)1unc0.30.0%0.0
IN17A071, IN17A081 (L)1ACh0.30.0%0.0
SNta071ACh0.30.0%0.0
IN09A019 (L)1GABA0.30.0%0.0
TN1a_c (R)1ACh0.30.0%0.0
IN13B104 (R)1GABA0.30.0%0.0
IN00A039 (M)1GABA0.30.0%0.0
IN19B031 (L)1ACh0.30.0%0.0
IN09A007 (L)1GABA0.30.0%0.0
INXXX044 (L)1GABA0.30.0%0.0
AN09A005 (L)1unc0.30.0%0.0
AN09B023 (R)1ACh0.30.0%0.0
AN19B019 (R)1ACh0.30.0%0.0
IN19B055 (L)1ACh0.30.0%0.0
IN17A111 (L)1ACh0.30.0%0.0
IN06B085 (R)1GABA0.30.0%0.0
IN16B092 (L)1Glu0.30.0%0.0
IN12A052_b (R)1ACh0.30.0%0.0
IN19B070 (L)1ACh0.30.0%0.0
IN12A044 (L)1ACh0.30.0%0.0
IN08A011 (R)1Glu0.30.0%0.0
IN17A033 (L)1ACh0.30.0%0.0
INXXX076 (L)1ACh0.30.0%0.0
tpn MN (R)1unc0.30.0%0.0
IN04B002 (L)1ACh0.30.0%0.0
i2 MN (L)1ACh0.30.0%0.0
vMS16 (R)1unc0.30.0%0.0
AN08B084 (L)1ACh0.30.0%0.0
AN27X008 (R)1HA0.30.0%0.0
AN17B016 (R)1GABA0.30.0%0.0
DNd02 (L)1unc0.30.0%0.0
AN12B001 (L)1GABA0.30.0%0.0