Male CNS – Cell Type Explorer

SNxx26(R)

12
Total Neurons
Right: 6 | Left: 6
log ratio : 0.00
2,623
Total Synapses
Post: 807 | Pre: 1,816
log ratio : 1.17
437.2
Mean Synapses
Post: 134.5 | Pre: 302.7
log ratio : 1.17
ACh(97.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)33241.1%1.3785947.3%
Ov(R)13616.9%1.4036019.8%
WTct(UTct-T2)(L)12115.0%0.9122812.6%
Ov(L)15218.8%0.3319110.5%
VNC-unspecified485.9%1.661528.4%
LegNp(T2)(R)91.1%0.92170.9%
ADMN(R)81.0%-1.0040.2%
PDMN(R)10.1%1.5830.2%
mVAC(T2)(R)00.0%inf20.1%

Connectivity

Inputs

upstream
partner
#NTconns
SNxx26
%
In
CV
IN05B001 (R)1GABA16.813.4%0.0
IN05B001 (L)1GABA14.311.4%0.0
IN03B078 (R)2GABA13.811.0%0.4
SNxx2612ACh13.310.6%0.6
IN03B065 (L)2GABA11.28.9%0.1
IN03B065 (R)2GABA7.86.2%0.5
IN03B078 (L)2GABA7.25.7%0.2
IN19A043 (R)2GABA4.73.7%0.1
IN05B016 (L)1GABA4.53.6%0.0
IN05B016 (R)1GABA4.23.3%0.0
IN03B057 (R)1GABA3.32.6%0.0
IN03B057 (L)2GABA3.32.6%0.8
IN03B089 (R)4GABA2.31.9%0.8
IN19A043 (L)1GABA21.6%0.0
IN19A057 (L)1GABA1.20.9%0.0
IN11B015 (L)2GABA1.20.9%0.7
IN03B089 (L)3GABA10.8%0.7
IN10B023 (L)1ACh10.8%0.0
SNxx283ACh0.80.7%0.6
IN19A049 (R)1GABA0.80.7%0.0
IN19A056 (R)2GABA0.70.5%0.5
IN19A049 (L)1GABA0.70.5%0.0
IN19A056 (L)1GABA0.50.4%0.0
IN06B083 (L)1GABA0.50.4%0.0
IN00A008 (M)1GABA0.50.4%0.0
AN05B015 (L)1GABA0.50.4%0.0
SNta02,SNta093ACh0.50.4%0.0
INXXX280 (L)1GABA0.30.3%0.0
IN06B066 (L)2GABA0.30.3%0.0
INXXX008 (L)1unc0.30.3%0.0
SNta071ACh0.20.1%0.0
IN17B010 (R)1GABA0.20.1%0.0
INXXX056 (L)1unc0.20.1%0.0
SNta131ACh0.20.1%0.0
IN17B006 (R)1GABA0.20.1%0.0
AN05B069 (L)1GABA0.20.1%0.0
DNge122 (L)1GABA0.20.1%0.0
IN11B020 (R)1GABA0.20.1%0.0
IN17A116 (R)1ACh0.20.1%0.0
IN19B043 (R)1ACh0.20.1%0.0
IN12B079_d (L)1GABA0.20.1%0.0
AN05B096 (R)1ACh0.20.1%0.0
AN09B023 (R)1ACh0.20.1%0.0
IN13A022 (R)1GABA0.20.1%0.0
IN11B015 (R)1GABA0.20.1%0.0
IN19B067 (L)1ACh0.20.1%0.0
SNpp421ACh0.20.1%0.0
SNta22,SNta331ACh0.20.1%0.0
IN12B079_c (L)1GABA0.20.1%0.0
SNpp161ACh0.20.1%0.0
IN19B086 (L)1ACh0.20.1%0.0
SNpp051ACh0.20.1%0.0
IN06B024 (R)1GABA0.20.1%0.0
SNpp2315-HT0.20.1%0.0
IN13B104 (L)1GABA0.20.1%0.0
EA27X006 (L)1unc0.20.1%0.0
IN10B023 (R)1ACh0.20.1%0.0
tp2 MN (R)1unc0.20.1%0.0
IN11B025 (R)1GABA0.20.1%0.0
SNta061ACh0.20.1%0.0
IN17B001 (L)1GABA0.20.1%0.0
vMS16 (L)1unc0.20.1%0.0
IN19B040 (L)1ACh0.20.1%0.0
INXXX280 (R)1GABA0.20.1%0.0
DNge150 (M)1unc0.20.1%0.0
DNge142 (L)1GABA0.20.1%0.0
DNge142 (R)1GABA0.20.1%0.0
DNd03 (R)1Glu0.20.1%0.0

Outputs

downstream
partner
#NTconns
SNxx26
%
Out
CV
IN05B028 (L)3GABA78.811.1%1.0
IN05B028 (R)3GABA69.89.9%1.0
IN19B067 (R)7ACh28.34.0%0.8
IN05B010 (L)1GABA243.4%0.0
IN05B001 (R)1GABA20.52.9%0.0
IN03B058 (R)10GABA20.22.8%1.2
IN00A025 (M)4GABA19.82.8%0.5
IN19B043 (R)4ACh16.52.3%0.9
IN17B004 (R)2GABA162.3%0.6
IN03B053 (R)2GABA15.22.1%0.1
IN13A022 (R)4GABA152.1%0.7
AN06B031 (L)1GABA12.51.8%0.0
IN19A056 (R)3GABA12.21.7%0.1
SNxx2611ACh11.71.6%0.5
IN10B023 (L)1ACh11.21.6%0.0
IN19B067 (L)5ACh10.31.5%1.0
IN13A013 (R)1GABA10.21.4%0.0
AN19B019 (L)1ACh9.81.4%0.0
IN19B043 (L)5ACh9.21.3%0.7
IN03B052 (R)3GABA8.71.2%0.4
IN00A039 (M)2GABA8.21.2%0.1
IN17B001 (R)1GABA7.21.0%0.0
IN11B013 (R)3GABA6.70.9%0.6
IN03B049 (R)1GABA6.70.9%0.0
IN19B086 (R)5ACh6.70.9%0.5
IN03B058 (L)7GABA6.70.9%0.5
IN06A037 (R)1GABA6.50.9%0.0
tpn MN (R)1unc6.30.9%0.0
IN17B001 (L)1GABA5.80.8%0.0
IN03B089 (R)6GABA5.50.8%0.4
IN11A032_e (L)1ACh5.20.7%0.0
IN10B023 (R)1ACh50.7%0.0
IN06B013 (L)1GABA4.80.7%0.0
IN11A001 (L)1GABA4.80.7%0.0
IN05B010 (R)1GABA4.80.7%0.0
IN03B057 (L)2GABA4.50.6%0.8
IN11A032_e (R)1ACh4.30.6%0.0
IN00A047 (M)4GABA4.30.6%0.6
IN03B071 (R)3GABA4.20.6%0.6
IN19A042 (R)2GABA40.6%0.1
IN03B057 (R)2GABA3.80.5%0.3
IN11A032_a (R)1ACh3.70.5%0.0
AN19B036 (R)1ACh3.50.5%0.0
IN11A001 (R)1GABA3.30.5%0.0
IN19A043 (R)2GABA3.30.5%0.5
iii3 MN (L)1unc3.30.5%0.0
AN17B009 (R)1GABA3.30.5%0.0
IN17A112 (R)1ACh3.20.4%0.0
iii3 MN (R)1unc3.20.4%0.0
ANXXX027 (R)3ACh3.20.4%1.0
IN03B089 (L)7GABA3.20.4%0.6
IN17A060 (R)1Glu30.4%0.0
IN07B031 (R)1Glu2.80.4%0.0
IN07B031 (L)1Glu2.70.4%0.0
ANXXX027 (L)4ACh2.70.4%1.3
DLMn a, b (L)1unc2.50.4%0.0
IN23B065 (R)1ACh2.50.4%0.0
IN19A026 (R)1GABA2.50.4%0.0
IN03B052 (L)2GABA2.50.4%0.7
IN19A049 (L)1GABA2.30.3%0.0
AN05B097 (R)1ACh2.30.3%0.0
IN03B049 (L)1GABA2.30.3%0.0
IN19A056 (L)2GABA2.30.3%0.0
IN05B001 (L)1GABA2.30.3%0.0
IN17B014 (L)1GABA2.20.3%0.0
IN09B005 (R)1Glu2.20.3%0.0
IN18B046 (L)1ACh20.3%0.0
AN17B005 (R)1GABA20.3%0.0
IN00A055 (M)1GABA20.3%0.0
IN00A031 (M)2GABA20.3%0.2
IN23B066 (L)1ACh1.80.3%0.0
IN19A043 (L)1GABA1.80.3%0.0
SNxx282ACh1.80.3%0.1
IN13B104 (L)1GABA1.80.3%0.0
IN06B013 (R)1GABA1.80.3%0.0
AN17B009 (L)1GABA1.80.3%0.0
IN12A043_c (R)1ACh1.70.2%0.0
IN11A004 (R)1ACh1.70.2%0.0
IN00A050 (M)1GABA1.70.2%0.0
IN19B086 (L)3ACh1.70.2%0.6
IN19A142 (R)1GABA1.50.2%0.0
AN19B019 (R)1ACh1.50.2%0.0
tpn MN (L)1unc1.50.2%0.0
IN00A007 (M)1GABA1.30.2%0.0
IN03B053 (L)2GABA1.30.2%0.8
IN17B014 (R)1GABA1.30.2%0.0
IN01A031 (L)1ACh1.30.2%0.0
IN06A037 (L)1GABA1.30.2%0.0
DNa08 (L)1ACh1.30.2%0.0
IN09A023 (L)2GABA1.30.2%0.0
AN23B026 (L)1ACh1.20.2%0.0
AN17B002 (L)1GABA1.20.2%0.0
AN19B001 (R)1ACh1.20.2%0.0
IN17A085 (R)2ACh1.20.2%0.4
IN03B071 (L)2GABA1.20.2%0.4
IN11B015 (R)2GABA1.20.2%0.1
IN19A057 (L)1GABA1.20.2%0.0
IN19B041 (L)1ACh10.1%0.0
IN17A043, IN17A046 (R)2ACh10.1%0.3
IN12A043_d (R)1ACh10.1%0.0
IN03B056 (R)1GABA10.1%0.0
AN27X008 (L)1HA0.80.1%0.0
IN03B074 (L)1GABA0.80.1%0.0
IN03B046 (R)2GABA0.80.1%0.6
IN00A045 (M)1GABA0.80.1%0.0
IN12B016 (R)1GABA0.80.1%0.0
DLMn a, b (R)1unc0.80.1%0.0
IN09B005 (L)1Glu0.80.1%0.0
IN11B015 (L)2GABA0.80.1%0.2
IN07B039 (R)2ACh0.80.1%0.2
DLMn c-f (L)2unc0.80.1%0.6
IN13B104 (R)1GABA0.80.1%0.0
AN06B031 (R)1GABA0.70.1%0.0
IN23B008 (R)1ACh0.70.1%0.0
AN09B027 (L)1ACh0.70.1%0.0
IN03B069 (R)1GABA0.70.1%0.0
IN19A042 (L)1GABA0.70.1%0.0
IN08A011 (L)2Glu0.70.1%0.5
IN13A013 (L)1GABA0.70.1%0.0
AN17A018 (R)1ACh0.70.1%0.0
IN19B103 (R)2ACh0.70.1%0.5
IN09A023 (R)2GABA0.70.1%0.5
IN03B065 (R)2GABA0.70.1%0.5
IN00A022 (M)2GABA0.70.1%0.5
DVMn 1a-c (R)2unc0.70.1%0.5
IN03B094 (L)1GABA0.70.1%0.0
IN03B078 (R)2GABA0.70.1%0.5
IN19B103 (L)2ACh0.70.1%0.5
IN08A011 (R)3Glu0.70.1%0.4
IN19B072 (L)1ACh0.50.1%0.0
AN27X015 (R)1Glu0.50.1%0.0
IN06A081 (L)1GABA0.50.1%0.0
DNg24 (R)1GABA0.50.1%0.0
INXXX056 (L)1unc0.50.1%0.0
IN17B015 (R)1GABA0.50.1%0.0
AN12B006 (L)1unc0.50.1%0.0
SNta061ACh0.50.1%0.0
IN09A007 (R)1GABA0.50.1%0.0
IN17B004 (L)1GABA0.50.1%0.0
AN19B001 (L)1ACh0.50.1%0.0
DNge138 (M)1unc0.50.1%0.0
IN03B078 (L)1GABA0.50.1%0.0
AN18B032 (L)1ACh0.50.1%0.0
IN19B077 (L)2ACh0.50.1%0.3
vMS16 (R)1unc0.50.1%0.0
IN05B016 (R)1GABA0.50.1%0.0
IN07B054 (R)1ACh0.50.1%0.0
IN11A004 (L)2ACh0.50.1%0.3
IN05B016 (L)1GABA0.50.1%0.0
IN17B003 (L)1GABA0.50.1%0.0
IN08A040 (R)2Glu0.50.1%0.3
vMS11 (L)2Glu0.50.1%0.3
IN11A006 (R)2ACh0.50.1%0.3
INXXX216 (R)1ACh0.30.0%0.0
ANXXX404 (L)1GABA0.30.0%0.0
IN11A026 (R)1ACh0.30.0%0.0
IN19B041 (R)1ACh0.30.0%0.0
IN06B019 (L)1GABA0.30.0%0.0
AN27X008 (R)1HA0.30.0%0.0
INXXX056 (R)1unc0.30.0%0.0
AN19B024 (L)1ACh0.30.0%0.0
DLMn c-f (R)1unc0.30.0%0.0
dMS10 (L)1ACh0.30.0%0.0
INXXX008 (L)1unc0.30.0%0.0
AN19B036 (L)1ACh0.30.0%0.0
IN06A103 (L)1GABA0.30.0%0.0
IN07B080 (R)1ACh0.30.0%0.0
IN19B056 (L)1ACh0.30.0%0.0
AN17B013 (R)1GABA0.30.0%0.0
IN17A097 (L)1ACh0.30.0%0.0
SNpp162ACh0.30.0%0.0
AN05B068 (R)1GABA0.30.0%0.0
IN03B065 (L)1GABA0.30.0%0.0
SNta02,SNta092ACh0.30.0%0.0
IN19B057 (R)2ACh0.30.0%0.0
IN17A100 (L)1ACh0.30.0%0.0
SNpp051ACh0.30.0%0.0
ANXXX264 (L)1GABA0.30.0%0.0
DVMn 1a-c (L)1unc0.20.0%0.0
IN11A032_a (L)1ACh0.20.0%0.0
IN06B066 (L)1GABA0.20.0%0.0
IN17A049 (R)1ACh0.20.0%0.0
IN17A109 (R)1ACh0.20.0%0.0
IN19B056 (R)1ACh0.20.0%0.0
IN04B046 (R)1ACh0.20.0%0.0
AN05B010 (L)1GABA0.20.0%0.0
AN05B046 (L)1GABA0.20.0%0.0
IN17A118 (R)1ACh0.20.0%0.0
IN12A043_c (L)1ACh0.20.0%0.0
TN1a_b (R)1ACh0.20.0%0.0
IN19B031 (R)1ACh0.20.0%0.0
AN17B002 (R)1GABA0.20.0%0.0
DNd02 (L)1unc0.20.0%0.0
IN06B078 (R)1GABA0.20.0%0.0
IN19B058 (L)1ACh0.20.0%0.0
IN06B059 (R)1GABA0.20.0%0.0
INXXX472 (L)1GABA0.20.0%0.0
IN13B008 (L)1GABA0.20.0%0.0
AN18B004 (L)1ACh0.20.0%0.0
AN09B029 (L)1ACh0.20.0%0.0
IN06B079 (L)1GABA0.20.0%0.0
IN12A042 (L)1ACh0.20.0%0.0
IN06B069 (L)1GABA0.20.0%0.0
IN06A033 (R)1GABA0.20.0%0.0
INXXX280 (L)1GABA0.20.0%0.0
vMS11 (R)1Glu0.20.0%0.0
IN12A042 (R)1ACh0.20.0%0.0
IN19A049 (R)1GABA0.20.0%0.0
IN06B024 (R)1GABA0.20.0%0.0
IN18B012 (R)1ACh0.20.0%0.0
ps1 MN (R)1unc0.20.0%0.0
AN05B015 (L)1GABA0.20.0%0.0
AN09B030 (R)1Glu0.20.0%0.0
AN17B011 (R)1GABA0.20.0%0.0
AN17B016 (R)1GABA0.20.0%0.0
DNge150 (M)1unc0.20.0%0.0
IN11A043 (L)1ACh0.20.0%0.0
IN23B005 (R)1ACh0.20.0%0.0
IN16B099 (R)1Glu0.20.0%0.0
IN03B056 (L)1GABA0.20.0%0.0
IN03B069 (L)1GABA0.20.0%0.0
IN17B010 (R)1GABA0.20.0%0.0
IN23B065 (L)1ACh0.20.0%0.0
AN08B012 (R)1ACh0.20.0%0.0
ANXXX264 (R)1GABA0.20.0%0.0
DNd03 (L)1Glu0.20.0%0.0
SNpp371ACh0.20.0%0.0
IN17A099 (R)1ACh0.20.0%0.0
TN1a_f (L)1ACh0.20.0%0.0
IN17A097 (R)1ACh0.20.0%0.0
IN27X007 (R)1unc0.20.0%0.0
AN08B018 (L)1ACh0.20.0%0.0
DNg98 (L)1GABA0.20.0%0.0