Male CNS – Cell Type Explorer

SNxx11(L)

11
Total Neurons
Right: 5 | Left: 6
log ratio : 0.26
6,566
Total Synapses
Post: 3,489 | Pre: 3,077
log ratio : -0.18
1,094.3
Mean Synapses
Post: 581.5 | Pre: 512.8
log ratio : -0.18
ACh(97.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm3,42598.2%-0.262,85692.8%
AbNT(L)641.8%1.792217.2%

Connectivity

Inputs

upstream
partner
#NTconns
SNxx11
%
In
CV
SNxx116ACh64.816.1%0.5
SNxx0212ACh5513.6%0.7
INXXX395 (R)2GABA5012.4%0.3
INXXX124 (L)1GABA43.510.8%0.0
AN01B002 (L)3GABA24.76.1%0.8
INXXX406 (R)2GABA19.54.8%0.2
INXXX217 (R)3GABA17.24.3%1.0
SNxx236ACh15.23.8%0.6
INXXX124 (R)1GABA14.53.6%0.0
AN01B002 (R)1GABA11.22.8%0.0
INXXX225 (L)1GABA82.0%0.0
IN05B033 (R)2GABA82.0%0.5
IN05B013 (L)1GABA5.21.3%0.0
IN01A051 (R)2ACh51.2%0.5
IN05B019 (R)1GABA4.51.1%0.0
SNxx102ACh4.31.1%0.7
INXXX253 (L)3GABA4.31.1%0.7
IN05B033 (L)1GABA41.0%0.0
AN05B068 (R)2GABA3.30.8%0.9
INXXX405 (R)1ACh3.20.8%0.0
INXXX253 (R)2GABA2.80.7%0.9
INXXX058 (L)2GABA2.80.7%0.8
IN05B013 (R)1GABA2.50.6%0.0
IN01A048 (R)2ACh2.20.5%0.1
INXXX258 (R)2GABA20.5%0.3
IN02A044 (L)1Glu1.50.4%0.0
INXXX045 (L)3unc1.30.3%0.4
SNxx048ACh1.30.3%0.0
INXXX436 (L)1GABA1.20.3%0.0
INXXX411 (L)2GABA1.20.3%0.1
IN00A033 (M)2GABA10.2%0.7
INXXX360 (L)2GABA0.80.2%0.2
INXXX381 (L)1ACh0.70.2%0.0
INXXX237 (L)1ACh0.70.2%0.0
INXXX217 (L)2GABA0.70.2%0.5
DNg34 (L)1unc0.70.2%0.0
INXXX428 (R)2GABA0.70.2%0.5
INXXX334 (L)1GABA0.70.2%0.0
INXXX290 (R)3unc0.70.2%0.4
INXXX316 (L)2GABA0.70.2%0.5
IN01A065 (R)1ACh0.50.1%0.0
IN18B033 (L)1ACh0.50.1%0.0
INXXX100 (R)1ACh0.50.1%0.0
INXXX417 (L)2GABA0.50.1%0.3
IN00A024 (M)2GABA0.50.1%0.3
IN14A020 (R)1Glu0.30.1%0.0
DNd04 (R)1Glu0.30.1%0.0
MNad53 (L)1unc0.30.1%0.0
INXXX303 (L)1GABA0.30.1%0.0
INXXX243 (L)1GABA0.30.1%0.0
INXXX416 (L)1unc0.30.1%0.0
INXXX411 (R)2GABA0.30.1%0.0
INXXX396 (R)2GABA0.30.1%0.0
INXXX417 (R)2GABA0.30.1%0.0
INXXX333 (L)1GABA0.30.1%0.0
INXXX429 (R)2GABA0.30.1%0.0
INXXX394 (L)1GABA0.20.0%0.0
IN01A059 (R)1ACh0.20.0%0.0
INXXX054 (R)1ACh0.20.0%0.0
INXXX290 (L)1unc0.20.0%0.0
SNxx031ACh0.20.0%0.0
INXXX429 (L)1GABA0.20.0%0.0
INXXX087 (L)1ACh0.20.0%0.0
SNxx141ACh0.20.0%0.0
INXXX260 (L)1ACh0.20.0%0.0
INXXX369 (L)1GABA0.20.0%0.0
IN07B061 (L)1Glu0.20.0%0.0
IN01A045 (L)1ACh0.20.0%0.0
IN19A028 (L)1ACh0.20.0%0.0
INXXX100 (L)1ACh0.20.0%0.0
SNch011ACh0.20.0%0.0
INXXX334 (R)1GABA0.20.0%0.0
IN09A015 (L)1GABA0.20.0%0.0
INXXX281 (L)1ACh0.20.0%0.0
INXXX281 (R)1ACh0.20.0%0.0
INXXX320 (L)1GABA0.20.0%0.0
INXXX448 (L)1GABA0.20.0%0.0
INXXX346 (R)1GABA0.20.0%0.0
IN18B033 (R)1ACh0.20.0%0.0
INXXX126 (L)1ACh0.20.0%0.0
DNg66 (M)1unc0.20.0%0.0
INXXX357 (L)1ACh0.20.0%0.0
IN23B042 (R)1ACh0.20.0%0.0
INXXX333 (R)1GABA0.20.0%0.0
INXXX395 (L)1GABA0.20.0%0.0
INXXX282 (R)1GABA0.20.0%0.0
INXXX331 (R)1ACh0.20.0%0.0
INXXX215 (L)1ACh0.20.0%0.0
ANXXX074 (L)1ACh0.20.0%0.0

Outputs

downstream
partner
#NTconns
SNxx11
%
Out
CV
INXXX058 (L)3GABA79.38.2%0.5
INXXX126 (L)4ACh66.26.8%0.6
SNxx116ACh64.86.7%0.4
SNxx0212ACh36.33.7%0.6
IN01A048 (R)3ACh28.83.0%0.7
INXXX260 (L)2ACh28.52.9%0.1
INXXX334 (L)2GABA27.32.8%0.5
INXXX411 (L)2GABA272.8%0.3
IN01A051 (R)2ACh26.22.7%0.3
INXXX395 (L)2GABA24.22.5%0.2
INXXX124 (L)1GABA232.4%0.0
INXXX215 (L)2ACh22.82.3%0.0
INXXX281 (L)3ACh22.72.3%0.2
IN07B061 (L)4Glu18.21.9%1.0
INXXX396 (R)4GABA171.7%0.7
INXXX246 (L)2ACh15.81.6%0.2
INXXX027 (R)2ACh15.71.6%0.5
INXXX217 (R)5GABA13.81.4%1.3
INXXX395 (R)2GABA13.31.4%0.1
IN01A061 (R)4ACh13.21.4%0.6
INXXX087 (L)1ACh12.21.3%0.0
INXXX096 (L)2ACh121.2%0.2
INXXX225 (L)1GABA11.71.2%0.0
INXXX281 (R)2ACh11.31.2%0.7
INXXX360 (L)2GABA11.21.1%0.6
IN01A051 (L)2ACh111.1%1.0
INXXX396 (L)4GABA10.21.0%0.7
INXXX032 (R)3ACh9.81.0%0.4
INXXX124 (R)1GABA9.51.0%0.0
INXXX032 (L)3ACh9.51.0%0.8
AN01B002 (L)3GABA9.31.0%0.6
INXXX100 (L)3ACh90.9%0.4
IN01A065 (R)2ACh8.80.9%1.0
INXXX428 (L)2GABA8.70.9%0.7
INXXX411 (R)2GABA8.70.9%0.5
INXXX246 (R)2ACh8.30.9%0.6
SNxx237ACh7.30.8%1.1
INXXX297 (L)3ACh7.30.8%0.7
INXXX027 (L)2ACh7.20.7%0.7
INXXX253 (L)3GABA70.7%0.9
INXXX306 (R)2GABA6.70.7%0.3
INXXX282 (R)1GABA6.30.7%0.0
AN01B002 (R)1GABA6.30.7%0.0
INXXX306 (L)2GABA6.20.6%0.4
INXXX315 (L)2ACh5.80.6%0.8
INXXX416 (L)3unc5.80.6%0.5
INXXX215 (R)2ACh5.80.6%0.7
IN06A106 (L)4GABA5.50.6%0.8
INXXX228 (L)3ACh5.30.5%0.6
INXXX217 (L)4GABA5.30.5%0.6
SNxx102ACh5.20.5%0.7
INXXX406 (L)2GABA5.20.5%0.3
ANXXX027 (R)3ACh5.20.5%0.7
INXXX025 (L)1ACh4.70.5%0.0
INXXX357 (L)1ACh4.70.5%0.0
INXXX058 (R)1GABA4.50.5%0.0
INXXX161 (L)2GABA4.20.4%0.4
INXXX230 (L)3GABA4.20.4%0.3
INXXX369 (L)3GABA40.4%0.6
INXXX446 (L)3ACh3.80.4%0.2
INXXX301 (R)2ACh3.50.4%0.3
INXXX438 (L)1GABA3.30.3%0.0
INXXX260 (R)2ACh3.20.3%0.7
INXXX406 (R)2GABA3.20.3%0.4
INXXX253 (R)2GABA3.20.3%0.1
INXXX334 (R)2GABA30.3%0.2
IN00A024 (M)4GABA30.3%0.5
IN00A033 (M)3GABA2.70.3%1.0
INXXX416 (R)3unc2.70.3%0.3
INXXX052 (L)1ACh2.50.3%0.0
INXXX100 (R)2ACh2.30.2%0.9
IN19B068 (L)2ACh2.30.2%0.1
INXXX339 (L)1ACh20.2%0.0
INXXX052 (R)1ACh20.2%0.0
INXXX316 (L)3GABA20.2%0.7
IN08B062 (R)3ACh20.2%0.6
INXXX045 (L)3unc20.2%0.2
INXXX231 (L)2ACh1.80.2%0.8
INXXX428 (R)2GABA1.80.2%0.1
INXXX322 (L)2ACh1.80.2%0.5
INXXX287 (L)1GABA1.70.2%0.0
ANXXX116 (L)1ACh1.70.2%0.0
INXXX448 (L)2GABA1.50.2%0.8
INXXX122 (L)2ACh1.30.1%0.8
INXXX429 (R)2GABA1.30.1%0.2
INXXX454 (L)2ACh1.20.1%0.7
INXXX341 (L)2GABA1.20.1%0.4
AN19A018 (L)1ACh1.20.1%0.0
INXXX450 (R)1GABA1.20.1%0.0
ANXXX116 (R)1ACh1.20.1%0.0
INXXX346 (L)1GABA10.1%0.0
INXXX333 (L)1GABA10.1%0.0
DNg34 (L)1unc10.1%0.0
ANXXX055 (L)1ACh0.80.1%0.0
ANXXX055 (R)1ACh0.80.1%0.0
INXXX401 (L)1GABA0.80.1%0.0
INXXX293 (L)2unc0.80.1%0.6
INXXX269 (L)1ACh0.80.1%0.0
INXXX301 (L)1ACh0.80.1%0.0
INXXX290 (L)3unc0.80.1%0.6
INXXX424 (L)2GABA0.80.1%0.6
INXXX417 (L)2GABA0.70.1%0.0
IN23B035 (R)2ACh0.70.1%0.0
INXXX394 (L)2GABA0.70.1%0.0
SNxx043ACh0.70.1%0.4
MNad15 (L)2unc0.70.1%0.5
INXXX243 (L)1GABA0.50.1%0.0
INXXX039 (R)1ACh0.50.1%0.0
IN10B001 (L)1ACh0.50.1%0.0
IN14A020 (R)2Glu0.50.1%0.3
IN01A043 (L)2ACh0.50.1%0.3
ANXXX074 (R)1ACh0.50.1%0.0
INXXX282 (L)1GABA0.50.1%0.0
INXXX290 (R)3unc0.50.1%0.0
INXXX417 (R)2GABA0.50.1%0.3
IN09A015 (L)1GABA0.50.1%0.0
SNxx032ACh0.50.1%0.3
IN23B035 (L)2ACh0.50.1%0.3
AN05B068 (R)1GABA0.30.0%0.0
INXXX303 (L)1GABA0.30.0%0.0
INXXX446 (R)1ACh0.30.0%0.0
IN00A027 (M)1GABA0.30.0%0.0
MNad53 (L)1unc0.30.0%0.0
INXXX324 (L)1Glu0.30.0%0.0
INXXX241 (L)1ACh0.30.0%0.0
INXXX267 (L)1GABA0.30.0%0.0
INXXX307 (R)1ACh0.30.0%0.0
INXXX111 (R)1ACh0.30.0%0.0
INXXX436 (R)1GABA0.30.0%0.0
INXXX114 (L)1ACh0.30.0%0.0
INXXX436 (L)2GABA0.30.0%0.0
INXXX353 (L)1ACh0.30.0%0.0
INXXX429 (L)2GABA0.30.0%0.0
INXXX424 (R)2GABA0.30.0%0.0
INXXX405 (R)1ACh0.20.0%0.0
IN08B077 (R)1ACh0.20.0%0.0
AN09B017d (L)1Glu0.20.0%0.0
IN01A059 (R)1ACh0.20.0%0.0
IN05B033 (R)1GABA0.20.0%0.0
IN09A011 (L)1GABA0.20.0%0.0
IN05B013 (L)1GABA0.20.0%0.0
ANXXX120 (L)1ACh0.20.0%0.0
INXXX440 (L)1GABA0.20.0%0.0
IN02A059 (L)1Glu0.20.0%0.0
INXXX370 (L)1ACh0.20.0%0.0
INXXX443 (L)1GABA0.20.0%0.0
INXXX263 (L)1GABA0.20.0%0.0
MNad65 (L)1unc0.20.0%0.0
MNad68 (L)1unc0.20.0%0.0
ANXXX084 (L)1ACh0.20.0%0.0
AN05B099 (L)1ACh0.20.0%0.0
SNch011ACh0.20.0%0.0
INXXX320 (L)1GABA0.20.0%0.0
ANXXX074 (L)1ACh0.20.0%0.0
ANXXX027 (L)1ACh0.20.0%0.0
INXXX307 (L)1ACh0.20.0%0.0
INXXX394 (R)1GABA0.20.0%0.0
IN05B019 (R)1GABA0.20.0%0.0
IN18B033 (L)1ACh0.20.0%0.0
INXXX258 (R)1GABA0.20.0%0.0
INXXX062 (R)1ACh0.20.0%0.0
INXXX114 (R)1ACh0.20.0%0.0
IN02A059 (R)1Glu0.20.0%0.0
IN06A117 (L)1GABA0.20.0%0.0
AN05B108 (R)1GABA0.20.0%0.0
INXXX331 (L)1ACh0.20.0%0.0
IN01A046 (R)1ACh0.20.0%0.0
IN01A045 (L)1ACh0.20.0%0.0
INXXX213 (L)1GABA0.20.0%0.0
DNg68 (R)1ACh0.20.0%0.0