Male CNS – Cell Type Explorer

SNta28,SNta44(R)

8
Total Neurons
Right: 5 | Left: 3
log ratio : -0.74
1,428
Total Synapses
Post: 691 | Pre: 737
log ratio : 0.09
285.6
Mean Synapses
Post: 138.2 | Pre: 147.4
log ratio : 0.09
ACh(96.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (1 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T2)(R)691100.0%0.09737100.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNta28,SNta44
%
In
CV
SNta28,SNta445ACh19.216.8%0.2
SNta289ACh13.211.6%0.8
AN01B002 (R)2GABA11.410.0%0.8
IN13A005 (R)1GABA10.49.1%0.0
SNta445ACh10.49.1%0.4
IN13A002 (R)1GABA8.47.4%0.0
IN19A042 (R)2GABA7.86.8%0.2
IN05B017 (L)2GABA7.26.3%0.9
IN13A024 (R)3GABA5.24.6%0.6
IN13A004 (R)1GABA4.64.0%0.0
SNta424ACh3.22.8%0.6
SNta454ACh32.6%0.5
INXXX004 (R)1GABA21.8%0.0
SNta27,SNta281ACh1.81.6%0.0
AN01B002 (L)1GABA1.41.2%0.0
IN19A056 (R)2GABA1.21.1%0.0
SNta202ACh0.60.5%0.3
IN01B001 (R)1GABA0.40.4%0.0
IN23B049 (R)1ACh0.40.4%0.0
IN13A039 (R)1GABA0.40.4%0.0
DNge104 (L)1GABA0.40.4%0.0
IN04B084 (R)1ACh0.20.2%0.0
IN14A001 (L)1GABA0.20.2%0.0
IN01B003 (R)1GABA0.20.2%0.0
IN05B036 (R)1GABA0.20.2%0.0
IN13B013 (L)1GABA0.20.2%0.0
AN05B017 (L)1GABA0.20.2%0.0
IN13A032 (R)1GABA0.20.2%0.0
IN13B021 (L)1GABA0.20.2%0.0

Outputs

downstream
partner
#NTconns
SNta28,SNta44
%
Out
CV
IN14A004 (L)1Glu34.26.0%0.0
IN23B037 (R)2ACh30.85.4%0.4
IN23B023 (R)3ACh24.84.3%0.1
IN23B009 (R)1ACh20.83.6%0.0
IN01B003 (R)1GABA20.63.6%0.0
SNta28,SNta445ACh19.23.4%0.1
AN01B002 (R)2GABA17.83.1%0.0
ANXXX027 (L)4ACh16.62.9%0.9
IN23B049 (R)2ACh16.42.9%0.1
IN13A004 (R)1GABA162.8%0.0
IN23B031 (R)2ACh15.82.8%0.9
IN23B020 (R)2ACh14.42.5%0.1
SNta445ACh12.42.2%0.2
IN01A012 (L)1ACh11.42.0%0.0
IN19A042 (R)2GABA10.41.8%0.2
IN14A013 (L)1Glu10.21.8%0.0
SNta2810ACh10.21.8%0.8
IN14A009 (L)1Glu9.81.7%0.0
IN13A002 (R)1GABA9.41.6%0.0
AN17A013 (R)1ACh9.21.6%0.0
AN04B001 (R)1ACh7.81.4%0.0
AN17A015 (R)1ACh7.41.3%0.0
IN21A019 (R)1Glu7.41.3%0.0
IN03A071 (R)5ACh7.41.3%0.7
ANXXX086 (L)1ACh6.81.2%0.0
IN14A008 (L)1Glu6.21.1%0.0
IN20A.22A007 (R)2ACh5.81.0%0.4
IN16B039 (R)1Glu5.81.0%0.0
IN03A033 (R)4ACh5.81.0%0.5
IN13A005 (R)1GABA5.61.0%0.0
IN01B001 (R)1GABA5.61.0%0.0
AN01B002 (L)1GABA5.40.9%0.0
IN04B036 (R)4ACh5.40.9%0.7
IN20A.22A046 (R)3ACh50.9%1.1
IN01B002 (R)1GABA4.40.8%0.0
IN01B002 (L)1GABA4.40.8%0.0
AN08B012 (L)1ACh4.40.8%0.0
IN01B037_a (R)1GABA4.20.7%0.0
SNta427ACh4.20.7%0.5
IN01B037_b (R)1GABA40.7%0.0
IN04B017 (R)4ACh40.7%0.8
IN20A.22A006 (R)2ACh3.80.7%0.7
IN04B084 (R)2ACh3.60.6%0.3
INXXX004 (R)1GABA3.40.6%0.0
IN01B042 (R)1GABA3.20.6%0.0
IN03A093 (R)3ACh3.20.6%0.6
IN23B060 (R)2ACh3.20.6%0.1
IN23B007 (R)1ACh2.80.5%0.0
MNml79 (R)1unc2.80.5%0.0
IN13A003 (R)1GABA2.80.5%0.0
IN23B021 (R)1ACh2.80.5%0.0
SNta454ACh2.80.5%0.5
IN04B033 (R)2ACh2.80.5%0.0
IN20A.22A050 (R)4ACh2.80.5%0.4
IN04B049_c (R)1ACh2.60.5%0.0
SNta27,SNta281ACh2.60.5%0.0
IN17A041 (R)2Glu2.60.5%0.4
AN17A024 (R)1ACh2.40.4%0.0
AN06B002 (R)1GABA2.40.4%0.0
AN08B012 (R)1ACh2.40.4%0.0
IN16B075_b (R)1Glu2.40.4%0.0
AN09B014 (L)1ACh20.3%0.0
IN01B048_b (R)1GABA20.3%0.0
IN14A002 (L)1Glu20.3%0.0
IN01A039 (L)1ACh20.3%0.0
IN14A012 (L)1Glu1.60.3%0.0
AN18B019 (R)1ACh1.40.2%0.0
IN03A009 (R)1ACh1.40.2%0.0
IN13A032 (R)2GABA1.40.2%0.4
IN04B090 (R)1ACh1.40.2%0.0
IN21A004 (R)1ACh1.40.2%0.0
IN13A054 (R)1GABA1.40.2%0.0
IN13A024 (R)2GABA1.40.2%0.4
IN13B025 (L)1GABA1.40.2%0.0
IN04B077 (R)2ACh1.40.2%0.4
AN17A018 (R)1ACh1.20.2%0.0
IN23B032 (R)1ACh1.20.2%0.0
IN16B075_a (R)1Glu1.20.2%0.0
IN13B027 (L)1GABA1.20.2%0.0
Sternal posterior rotator MN (R)1unc1.20.2%0.0
IN23B064 (R)1ACh1.20.2%0.0
IN04B056 (R)1ACh1.20.2%0.0
IN01A011 (L)1ACh1.20.2%0.0
IN13A022 (R)1GABA1.20.2%0.0
IN03A073 (R)1ACh1.20.2%0.0
IN09B008 (L)1Glu10.2%0.0
INXXX045 (R)1unc10.2%0.0
IN04B049_b (R)1ACh10.2%0.0
DNge104 (L)1GABA10.2%0.0
IN05B017 (L)1GABA0.80.1%0.0
IN23B059 (R)1ACh0.80.1%0.0
IN12B011 (L)1GABA0.80.1%0.0
IN13A001 (R)1GABA0.80.1%0.0
IN13A057 (R)2GABA0.80.1%0.5
IN01B020 (R)1GABA0.80.1%0.0
IN16B075_f (R)2Glu0.80.1%0.0
IN01B021 (R)1GABA0.80.1%0.0
IN04B058 (R)1ACh0.80.1%0.0
IN13A039 (R)1GABA0.80.1%0.0
IN13B026 (L)1GABA0.80.1%0.0
IN13B013 (L)1GABA0.80.1%0.0
IN23B029 (R)1ACh0.80.1%0.0
IN04B087 (R)1ACh0.80.1%0.0
IN17A044 (R)1ACh0.80.1%0.0
IN23B041 (R)1ACh0.80.1%0.0
IN20A.22A078 (R)1ACh0.60.1%0.0
IN04B049_a (R)1ACh0.60.1%0.0
IN17A001 (R)1ACh0.60.1%0.0
AN05B017 (L)1GABA0.60.1%0.0
INXXX045 (L)1unc0.60.1%0.0
IN04B027 (R)1ACh0.60.1%0.0
IN17A016 (R)1ACh0.60.1%0.0
AN09B009 (L)1ACh0.60.1%0.0
IN19A056 (R)2GABA0.60.1%0.3
IN01A056 (L)1ACh0.60.1%0.0
IN23B013 (R)1ACh0.60.1%0.0
IN01A005 (L)1ACh0.40.1%0.0
IN09B005 (L)1Glu0.40.1%0.0
IN08A007 (R)1Glu0.40.1%0.0
IN13B022 (L)1GABA0.40.1%0.0
IN23B014 (R)1ACh0.40.1%0.0
IN09A092 (R)1GABA0.40.1%0.0
Pleural remotor/abductor MN (R)1unc0.40.1%0.0
AN05B054_a (L)1GABA0.40.1%0.0
IN13B030 (L)1GABA0.40.1%0.0
IN03A007 (R)1ACh0.40.1%0.0
IN05B020 (L)1GABA0.40.1%0.0
AN17A014 (R)1ACh0.40.1%0.0
MNml82 (R)1unc0.40.1%0.0
AN05B036 (L)1GABA0.20.0%0.0
IN23B066 (R)1ACh0.20.0%0.0
IN03A096 (R)1ACh0.20.0%0.0
SNta201ACh0.20.0%0.0
IN09B045 (L)1Glu0.20.0%0.0
IN04B046 (R)1ACh0.20.0%0.0
IN04B057 (R)1ACh0.20.0%0.0
IN05B036 (R)1GABA0.20.0%0.0
IN13A052 (R)1GABA0.20.0%0.0
IN20A.22A074 (R)1ACh0.20.0%0.0
IN23B046 (R)1ACh0.20.0%0.0
IN13A072 (R)1GABA0.20.0%0.0
IN09B045 (R)1Glu0.20.0%0.0
AN05B009 (L)1GABA0.20.0%0.0
AN08B023 (R)1ACh0.20.0%0.0
IN13B004 (L)1GABA0.20.0%0.0
IN16B036 (R)1Glu0.20.0%0.0
AN05B036 (R)1GABA0.20.0%0.0
IN01A067 (L)1ACh0.20.0%0.0
IN13A017 (R)1GABA0.20.0%0.0
IN01B014 (R)1GABA0.20.0%0.0
IN13A010 (R)1GABA0.20.0%0.0
IN14A001 (L)1GABA0.20.0%0.0
IN12B079_d (L)1GABA0.20.0%0.0
IN04B100 (R)1ACh0.20.0%0.0
AN05B010 (L)1GABA0.20.0%0.0