Male CNS – Cell Type Explorer

SNta27,SNta28(R)

8
Total Neurons
Right: 1 | Left: 7
log ratio : 2.81
324
Total Synapses
Post: 134 | Pre: 190
log ratio : 0.50
324
Mean Synapses
Post: 134 | Pre: 190
log ratio : 0.50
ACh(96.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (1 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T2)(R)134100.0%0.50190100.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNta27,SNta28
%
In
CV
AN01B002 (R)2GABA2018.2%0.2
SNta287ACh1513.6%0.5
SNta28,SNta445ACh1311.8%0.5
IN13A005 (R)1GABA109.1%0.0
IN19A042 (R)2GABA109.1%0.4
IN13A024 (R)3GABA76.4%0.5
AN01B002 (L)1GABA65.5%0.0
SNta454ACh54.5%0.3
IN13A002 (R)1GABA43.6%0.0
IN05B017 (L)2GABA43.6%0.0
IN05B013 (L)1GABA21.8%0.0
INXXX045 (R)1unc21.8%0.0
SNta442ACh21.8%0.0
IN01B080 (R)1GABA10.9%0.0
SNta421ACh10.9%0.0
IN01B037_a (R)1GABA10.9%0.0
SNta271ACh10.9%0.0
IN19A056 (R)1GABA10.9%0.0
IN01B037_b (R)1GABA10.9%0.0
IN23B031 (R)1ACh10.9%0.0
IN13B013 (L)1GABA10.9%0.0
IN13A007 (R)1GABA10.9%0.0
IN01B003 (R)1GABA10.9%0.0

Outputs

downstream
partner
#NTconns
SNta27,SNta28
%
Out
CV
IN14A004 (L)1Glu325.0%0.0
IN23B031 (R)2ACh304.7%0.3
AN01B002 (R)2GABA294.5%0.1
IN03A071 (R)8ACh284.3%0.8
IN23B023 (R)3ACh274.2%0.2
IN01B003 (R)1GABA253.9%0.0
IN23B020 (R)2ACh213.3%0.4
IN13A005 (R)1GABA193.0%0.0
IN14A009 (L)1Glu193.0%0.0
IN23B037 (R)2ACh182.8%0.2
IN23B049 (R)2ACh152.3%0.6
AN01B002 (L)1GABA142.2%0.0
IN20A.22A006 (R)2ACh142.2%0.6
IN01A012 (L)1ACh121.9%0.0
IN13A002 (R)1GABA111.7%0.0
IN01B037_a (R)1GABA101.6%0.0
IN01B002 (R)1GABA101.6%0.0
IN14A012 (L)1Glu101.6%0.0
ANXXX086 (L)1ACh101.6%0.0
IN16B039 (R)1Glu91.4%0.0
IN23B064 (R)1ACh91.4%0.0
IN14A008 (L)1Glu91.4%0.0
AN06B002 (R)1GABA91.4%0.0
IN20A.22A007 (R)2ACh91.4%0.3
IN04B017 (R)3ACh91.4%0.5
IN19A042 (R)2GABA91.4%0.1
SNta28,SNta443ACh91.4%0.5
SNta285ACh91.4%0.6
IN23B060 (R)2ACh81.2%0.0
IN01B048_b (R)1GABA71.1%0.0
IN03A033 (R)2ACh71.1%0.1
IN20A.22A046 (R)3ACh71.1%0.2
IN01B042 (R)1GABA60.9%0.0
IN13B013 (L)1GABA60.9%0.0
IN23B009 (R)1ACh60.9%0.0
SNta453ACh60.9%0.7
IN04B036 (R)1ACh50.8%0.0
IN01B037_b (R)1GABA50.8%0.0
IN01A056 (L)1ACh50.8%0.0
IN04B033 (R)1ACh50.8%0.0
IN01B002 (L)1GABA50.8%0.0
AN17A013 (R)1ACh50.8%0.0
AN17A015 (R)1ACh50.8%0.0
AN17A024 (R)1ACh50.8%0.0
IN04B077 (R)2ACh50.8%0.6
IN17A001 (R)1ACh40.6%0.0
IN03A093 (R)1ACh40.6%0.0
IN01A039 (L)1ACh40.6%0.0
IN13A004 (R)1GABA40.6%0.0
IN16B075_f (R)2Glu40.6%0.5
SNta273ACh40.6%0.4
MNml79 (R)1unc30.5%0.0
IN14A013 (L)1Glu30.5%0.0
IN13B025 (L)1GABA30.5%0.0
AN09B009 (L)1ACh30.5%0.0
AN04B001 (R)1ACh30.5%0.0
IN05B017 (L)2GABA30.5%0.3
IN20A.22A078 (R)1ACh20.3%0.0
IN08A012 (R)1Glu20.3%0.0
IN13B030 (L)1GABA20.3%0.0
IN04B090 (R)1ACh20.3%0.0
IN23B059 (R)1ACh20.3%0.0
IN04B057 (R)1ACh20.3%0.0
IN21A004 (R)1ACh20.3%0.0
IN14A010 (L)1Glu20.3%0.0
IN09B008 (L)1Glu20.3%0.0
IN20A.22A008 (R)1ACh20.3%0.0
IN13A001 (R)1GABA20.3%0.0
INXXX004 (R)1GABA20.3%0.0
MNml82 (R)1unc20.3%0.0
IN01B001 (R)1GABA20.3%0.0
IN14A002 (L)1Glu20.3%0.0
AN08B012 (R)1ACh20.3%0.0
AN05B009 (L)1GABA20.3%0.0
ANXXX027 (L)1ACh20.3%0.0
ANXXX092 (L)1ACh20.3%0.0
AN08B012 (L)1ACh20.3%0.0
IN13B027 (L)1GABA10.2%0.0
IN13B004 (L)1GABA10.2%0.0
IN04B049_b (R)1ACh10.2%0.0
IN23B013 (R)1ACh10.2%0.0
SNta421ACh10.2%0.0
SNta371ACh10.2%0.0
SNta441ACh10.2%0.0
IN13A039 (R)1GABA10.2%0.0
IN20A.22A050 (R)1ACh10.2%0.0
IN01B048_a (R)1GABA10.2%0.0
IN13B060 (L)1GABA10.2%0.0
IN16B075_c (R)1Glu10.2%0.0
IN16B075_a (R)1Glu10.2%0.0
IN04B084 (R)1ACh10.2%0.0
IN19A056 (R)1GABA10.2%0.0
IN09B045 (L)1Glu10.2%0.0
IN13B038 (L)1GABA10.2%0.0
IN04B049_c (R)1ACh10.2%0.0
IN20A.22A004 (R)1ACh10.2%0.0
IN04B087 (R)1ACh10.2%0.0
INXXX045 (R)1unc10.2%0.0
INXXX045 (L)1unc10.2%0.0
IN21A019 (R)1Glu10.2%0.0
IN04B074 (R)1ACh10.2%0.0
IN21A002 (R)1Glu10.2%0.0
IN12B011 (L)1GABA10.2%0.0
AN07B011 (R)1ACh10.2%0.0
AN17A014 (R)1ACh10.2%0.0
AN18B019 (R)1ACh10.2%0.0