Male CNS – Cell Type Explorer

SNta21,SNta38(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
407
Total Synapses
Post: 239 | Pre: 168
log ratio : -0.51
407
Mean Synapses
Post: 239 | Pre: 168
log ratio : -0.51
ACh(95.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T3)(R)23899.6%-0.50168100.0%
MetaLN(R)10.4%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNta21,SNta38
%
In
CV
IN01B002 (R)2GABA3217.0%0.8
SNta287ACh3217.0%0.8
IN01B002 (L)1GABA2513.3%0.0
AN01B002 (R)1GABA2010.6%0.0
IN19A045 (R)2GABA168.5%0.0
AN01B002 (L)1GABA136.9%0.0
IN13A004 (R)1GABA84.3%0.0
IN01B006 (R)1GABA52.7%0.0
SNta264ACh52.7%0.3
IN13B004 (L)1GABA42.1%0.0
IN05B017 (R)2GABA31.6%0.3
IN04B029 (R)1ACh21.1%0.0
IN13A069 (R)1GABA21.1%0.0
SNta441ACh21.1%0.0
IN05B017 (L)1GABA21.1%0.0
SNxx332ACh21.1%0.0
SNta211ACh10.5%0.0
IN23B039 (R)1ACh10.5%0.0
IN12B011 (L)1GABA10.5%0.0
SNta381ACh10.5%0.0
SNta201ACh10.5%0.0
IN01B003 (R)1GABA10.5%0.0
IN01B077_a (R)1GABA10.5%0.0
IN17B010 (R)1GABA10.5%0.0
IN23B041 (R)1ACh10.5%0.0
IN23B031 (R)1ACh10.5%0.0
IN01B010 (R)1GABA10.5%0.0
IN23B033 (R)1ACh10.5%0.0
IN12B007 (L)1GABA10.5%0.0
AN05B017 (L)1GABA10.5%0.0
ANXXX086 (L)1ACh10.5%0.0

Outputs

downstream
partner
#NTconns
SNta21,SNta38
%
Out
CV
IN23B031 (R)2ACh426.2%0.0
IN13B014 (L)1GABA395.8%0.0
IN01B002 (R)2GABA334.9%0.7
IN23B039 (R)1ACh253.7%0.0
ANXXX086 (L)1ACh253.7%0.0
IN20A.22A006 (R)2ACh202.9%0.1
IN17A017 (R)1ACh192.8%0.0
IN01B042 (R)2GABA182.7%0.2
IN23B081 (R)2ACh172.5%0.9
IN01B002 (L)1GABA162.4%0.0
SNta285ACh162.4%0.6
IN01B012 (R)1GABA152.2%0.0
IN01B003 (R)1GABA152.2%0.0
IN01B023_a (R)1GABA142.1%0.0
IN18B006 (R)1ACh131.9%0.0
IN23B014 (R)1ACh121.8%0.0
IN19A030 (R)1GABA111.6%0.0
IN14A010 (L)1Glu101.5%0.0
IN23B009 (R)1ACh101.5%0.0
ANXXX075 (L)1ACh101.5%0.0
IN14A012 (L)1Glu91.3%0.0
IN01A011 (L)1ACh91.3%0.0
IN16B024 (R)1Glu91.3%0.0
IN01B065 (R)2GABA91.3%0.8
IN20A.22A007 (R)2ACh91.3%0.3
IN23B067_a (R)1ACh81.2%0.0
IN01B020 (R)1GABA81.2%0.0
IN14A062 (L)1Glu81.2%0.0
IN23B023 (R)1ACh81.2%0.0
IN23B054 (R)1ACh71.0%0.0
AN01B002 (R)1GABA71.0%0.0
IN01A012 (L)1ACh60.9%0.0
IN12B033 (L)1GABA60.9%0.0
IN23B070 (R)1ACh60.9%0.0
IN14A013 (L)1Glu60.9%0.0
IN23B033 (R)1ACh60.9%0.0
IN16B108 (R)3Glu60.9%0.7
IN23B056 (R)2ACh60.9%0.0
IN20A.22A027 (R)1ACh50.7%0.0
IN09B045 (R)1Glu50.7%0.0
IN20A.22A023 (R)1ACh50.7%0.0
IN14A036 (L)1Glu50.7%0.0
IN01B006 (R)1GABA50.7%0.0
IN13B013 (L)1GABA50.7%0.0
IN13A004 (R)1GABA50.7%0.0
AN17A009 (R)1ACh50.7%0.0
IN09B005 (L)1Glu40.6%0.0
IN23B030 (R)1ACh40.6%0.0
IN23B067_b (R)1ACh40.6%0.0
IN23B017 (R)1ACh40.6%0.0
IN23B020 (R)1ACh40.6%0.0
IN14A007 (L)1Glu40.6%0.0
AN17A015 (R)1ACh40.6%0.0
IN14A015 (L)2Glu40.6%0.0
IN12B011 (L)1GABA30.4%0.0
IN14A024 (L)1Glu30.4%0.0
IN13B004 (L)1GABA30.4%0.0
IN04B001 (R)1ACh30.4%0.0
AN09B019 (L)1ACh30.4%0.0
IN13B026 (L)2GABA30.4%0.3
IN05B017 (L)2GABA30.4%0.3
SNta211ACh20.3%0.0
IN12B038 (R)1GABA20.3%0.0
IN13A014 (R)1GABA20.3%0.0
IN09A024 (R)1GABA20.3%0.0
IN23B041 (R)1ACh20.3%0.0
IN19A045 (R)1GABA20.3%0.0
IN14A012 (R)1Glu20.3%0.0
IN19A029 (R)1GABA20.3%0.0
IN21A018 (R)1ACh20.3%0.0
IN09B045 (L)1Glu20.3%0.0
IN13B009 (L)1GABA20.3%0.0
Ti extensor MN (R)1unc20.3%0.0
AN09B032 (R)1Glu20.3%0.0
AN08B023 (R)1ACh20.3%0.0
ANXXX005 (L)1unc20.3%0.0
ANXXX027 (L)1ACh20.3%0.0
IN04B063 (R)2ACh20.3%0.0
IN12B025 (L)2GABA20.3%0.0
IN12B036 (L)2GABA20.3%0.0
SNxx332ACh20.3%0.0
SNta262ACh20.3%0.0
IN03A068 (R)2ACh20.3%0.0
IN23B042 (R)1ACh10.1%0.0
SNta28,SNta291unc10.1%0.0
SNta381ACh10.1%0.0
IN13B054 (L)1GABA10.1%0.0
IN23B064 (R)1ACh10.1%0.0
IN14A104 (L)1Glu10.1%0.0
IN08A028 (R)1Glu10.1%0.0
IN04B032 (R)1ACh10.1%0.0
IN13B027 (L)1GABA10.1%0.0
IN23B025 (R)1ACh10.1%0.0
IN13B025 (L)1GABA10.1%0.0
IN04B032 (L)1ACh10.1%0.0
IN23B046 (R)1ACh10.1%0.0
IN12B032 (R)1GABA10.1%0.0
IN20A.22A004 (R)1ACh10.1%0.0
INXXX045 (L)1unc10.1%0.0
IN14A004 (L)1Glu10.1%0.0
IN09A013 (R)1GABA10.1%0.0
IN12B007 (L)1GABA10.1%0.0
IN04B005 (R)1ACh10.1%0.0
AN05B009 (L)1GABA10.1%0.0
AN12B019 (L)1GABA10.1%0.0
AN09B004 (L)1ACh10.1%0.0
AN05B017 (L)1GABA10.1%0.0
AN09B035 (L)1Glu10.1%0.0
AN09B032 (L)1Glu10.1%0.0
AN01B004 (R)1ACh10.1%0.0
AN01B002 (L)1GABA10.1%0.0