Male CNS – Cell Type Explorer

SNta21,SNta38

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
665
Total Synapses
Right: 407 | Left: 258
log ratio : -0.66
332.5
Mean Synapses
Right: 407 | Left: 258
log ratio : -0.66
ACh(95.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T3)30799.4%0.21356100.0%
MetaLN20.6%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNta21,SNta38
%
In
CV
IN01B0023GABA3430.1%0.6
AN01B0022GABA1815.9%0.0
SNta288ACh1715.0%0.8
IN19A0454GABA108.8%0.2
IN05B0173GABA4.54.0%0.3
IN01B0062GABA4.54.0%0.0
IN13A0041GABA43.5%0.0
SNxx335ACh32.7%0.3
SNta264ACh2.52.2%0.3
IN13B0041GABA21.8%0.0
IN01B0011GABA10.9%0.0
IN04B0291ACh10.9%0.0
IN13A0691GABA10.9%0.0
SNta441ACh10.9%0.0
IN13A0291GABA0.50.4%0.0
SNta291ACh0.50.4%0.0
IN12B0361GABA0.50.4%0.0
IN09B0451Glu0.50.4%0.0
SNta211ACh0.50.4%0.0
IN23B0391ACh0.50.4%0.0
IN12B0111GABA0.50.4%0.0
SNta381ACh0.50.4%0.0
SNta201ACh0.50.4%0.0
IN01B0031GABA0.50.4%0.0
IN01B077_a1GABA0.50.4%0.0
IN17B0101GABA0.50.4%0.0
IN23B0411ACh0.50.4%0.0
IN23B0311ACh0.50.4%0.0
IN01B0101GABA0.50.4%0.0
IN23B0331ACh0.50.4%0.0
IN12B0071GABA0.50.4%0.0
AN05B0171GABA0.50.4%0.0
ANXXX0861ACh0.50.4%0.0

Outputs

downstream
partner
#NTconns
SNta21,SNta38
%
Out
CV
IN01B0023GABA46.57.1%0.5
IN13B0142GABA45.56.9%0.0
IN23B0313ACh304.6%0.0
IN23B0392ACh253.8%0.0
IN20A.22A0064ACh22.53.4%0.1
IN01B0122GABA192.9%0.0
ANXXX0862ACh18.52.8%0.0
IN01B0032GABA172.6%0.0
IN17A0172ACh172.6%0.0
IN23B0814ACh16.52.5%0.9
IN01B0425GABA15.52.4%0.3
IN01B0203GABA142.1%0.5
IN14A0102Glu142.1%0.0
IN01B023_a2GABA142.1%0.0
IN01A0112ACh121.8%0.0
IN18B0062ACh121.8%0.0
IN01A0122ACh11.51.8%0.0
IN14A0132Glu111.7%0.0
IN23B0142ACh10.51.6%0.0
SNta286ACh101.5%0.6
IN09B0452Glu9.51.4%0.0
IN19A0302GABA9.51.4%0.0
IN23B0233ACh8.51.3%0.5
IN14A0242Glu81.2%0.0
IN14A0122Glu81.2%0.0
IN23B0092ACh81.2%0.0
IN01B0654GABA7.51.1%0.7
ANXXX0752ACh6.51.0%0.0
IN16B0242Glu6.51.0%0.0
AN01B0022GABA6.51.0%0.0
IN20A.22A0074ACh6.51.0%0.2
IN14A0622Glu6.51.0%0.0
IN23B0563ACh6.51.0%0.0
IN23B067_a2ACh60.9%0.0
IN23B0702ACh60.9%0.0
IN23B0542ACh5.50.8%0.0
IN12B0363GABA50.8%0.0
AN17A0152ACh50.8%0.0
IN23B0332ACh50.8%0.0
IN16B1084Glu4.50.7%0.5
IN13B0132GABA4.50.7%0.0
IN13A0042GABA4.50.7%0.0
IN23B0572ACh40.6%0.0
IN01B0062GABA40.6%0.0
IN23B0172ACh40.6%0.0
IN09B0081Glu3.50.5%0.0
IN20A.22A0272ACh3.50.5%0.0
IN20A.22A0232ACh3.50.5%0.0
AN17A0241ACh30.5%0.0
IN12B0331GABA30.5%0.0
IN13B0263GABA30.5%0.2
IN21A0191Glu2.50.4%0.0
IN14A0361Glu2.50.4%0.0
AN17A0091ACh2.50.4%0.0
IN09B0052Glu2.50.4%0.0
IN23B0202ACh2.50.4%0.0
IN14A0072Glu2.50.4%0.0
IN13B0273GABA2.50.4%0.0
IN14A0153Glu2.50.4%0.0
IN01B0801GABA20.3%0.0
IN23B0301ACh20.3%0.0
IN23B067_b1ACh20.3%0.0
INXXX0452unc20.3%0.5
IN20A.22A0372ACh20.3%0.0
IN04B0012ACh20.3%0.0
AN09B0192ACh20.3%0.0
IN04B0633ACh20.3%0.0
IN19A0452GABA20.3%0.0
AN09B0322Glu20.3%0.0
IN13A0691GABA1.50.2%0.0
IN13A0531GABA1.50.2%0.0
IN12B0311GABA1.50.2%0.0
IN01B0101GABA1.50.2%0.0
AN17A0621ACh1.50.2%0.0
IN12B0111GABA1.50.2%0.0
IN13B0041GABA1.50.2%0.0
IN05B0172GABA1.50.2%0.3
SNxx333ACh1.50.2%0.0
IN09A0132GABA1.50.2%0.0
IN13B0252GABA1.50.2%0.0
IN19A0292GABA1.50.2%0.0
AN08B0232ACh1.50.2%0.0
IN12B0253GABA1.50.2%0.0
IN03A0683ACh1.50.2%0.0
IN04B0621ACh10.2%0.0
IN17A0411Glu10.2%0.0
IN16B0321Glu10.2%0.0
IN17A0131ACh10.2%0.0
SNta211ACh10.2%0.0
IN12B0381GABA10.2%0.0
IN13A0141GABA10.2%0.0
IN09A0241GABA10.2%0.0
IN23B0411ACh10.2%0.0
IN21A0181ACh10.2%0.0
IN13B0091GABA10.2%0.0
Ti extensor MN1unc10.2%0.0
ANXXX0051unc10.2%0.0
ANXXX0271ACh10.2%0.0
SNta292ACh10.2%0.0
SNta262ACh10.2%0.0
IN23B0252ACh10.2%0.0
IN13B0542GABA10.2%0.0
IN23B0462ACh10.2%0.0
IN14A0042Glu10.2%0.0
IN12B0072GABA10.2%0.0
IN04B0322ACh10.2%0.0
IN13B0571GABA0.50.1%0.0
SNta421ACh0.50.1%0.0
IN04B0781ACh0.50.1%0.0
SNxx291ACh0.50.1%0.0
IN21A0371Glu0.50.1%0.0
IN03A0531ACh0.50.1%0.0
IN13B0221GABA0.50.1%0.0
IN05B0361GABA0.50.1%0.0
IN23B0371ACh0.50.1%0.0
IN23B0071ACh0.50.1%0.0
AN05B0991ACh0.50.1%0.0
AN18B0191ACh0.50.1%0.0
IN23B0421ACh0.50.1%0.0
SNta28,SNta291unc0.50.1%0.0
SNta381ACh0.50.1%0.0
IN23B0641ACh0.50.1%0.0
IN14A1041Glu0.50.1%0.0
IN08A0281Glu0.50.1%0.0
IN12B0321GABA0.50.1%0.0
IN20A.22A0041ACh0.50.1%0.0
IN04B0051ACh0.50.1%0.0
AN05B0091GABA0.50.1%0.0
AN12B0191GABA0.50.1%0.0
AN09B0041ACh0.50.1%0.0
AN05B0171GABA0.50.1%0.0
AN09B0351Glu0.50.1%0.0
AN01B0041ACh0.50.1%0.0