Male CNS – Cell Type Explorer

SNta19,SNta37(R)

13
Total Neurons
Right: 7 | Left: 6
log ratio : -0.22
2,510
Total Synapses
Post: 1,472 | Pre: 1,038
log ratio : -0.50
358.6
Mean Synapses
Post: 210.3 | Pre: 148.3
log ratio : -0.50
ACh(96.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T3)(R)1,46899.7%-0.501,038100.0%
MetaLN(R)20.1%-inf00.0%
VNC-unspecified20.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNta19,SNta37
%
In
CV
SNta3732ACh26.316.0%1.0
SNta19,SNta377ACh19.912.1%0.4
SNta2022ACh19.111.6%0.7
DNge104 (L)1GABA17.610.7%0.0
IN05B001 (R)1GABA10.66.4%0.0
IN05B001 (L)1GABA8.95.4%0.0
IN19A045 (R)3GABA7.64.6%0.4
INXXX004 (R)1GABA6.64.0%0.0
IN05B020 (L)1GABA6.33.8%0.0
IN01B031_b (R)1GABA4.12.5%0.0
IN13A007 (R)1GABA3.92.3%0.0
IN01B001 (R)1GABA3.72.3%0.0
SNta323ACh31.8%1.2
IN01B031_a (R)1GABA2.61.6%0.0
IN05B036 (L)1GABA2.41.5%0.0
IN17B010 (R)1GABA2.31.4%0.0
AN05B005 (R)1GABA1.91.1%0.0
SNta191ACh1.91.1%0.0
SNta341ACh1.91.1%0.0
AN01B002 (R)2GABA1.91.1%0.8
INXXX045 (R)2unc1.30.8%0.8
AN05B005 (L)1GABA1.10.7%0.0
SNta293ACh1.10.7%0.5
AN05B009 (L)1GABA10.6%0.0
IN05B010 (L)1GABA0.90.5%0.0
IN23B041 (R)1ACh0.60.3%0.0
IN01B030 (R)1GABA0.40.3%0.0
IN23B032 (R)1ACh0.40.3%0.0
IN14A009 (L)1Glu0.40.3%0.0
IN14A001 (L)1GABA0.30.2%0.0
AN05B036 (R)1GABA0.30.2%0.0
IN05B017 (R)1GABA0.30.2%0.0
IN19A057 (R)1GABA0.30.2%0.0
IN01B003 (R)1GABA0.30.2%0.0
INXXX213 (R)1GABA0.30.2%0.0
IN01B020 (R)2GABA0.30.2%0.0
IN23B033 (R)1ACh0.30.2%0.0
IN13A005 (R)1GABA0.30.2%0.0
SNch101ACh0.10.1%0.0
IN05B017 (L)1GABA0.10.1%0.0
IN04B096 (R)1ACh0.10.1%0.0
IN04B044 (R)1ACh0.10.1%0.0
IN23B009 (R)1ACh0.10.1%0.0
IN12B085 (L)1GABA0.10.1%0.0
AN05B036 (L)1GABA0.10.1%0.0
IN14A040 (L)1Glu0.10.1%0.0
IN14A036 (L)1Glu0.10.1%0.0
IN23B040 (R)1ACh0.10.1%0.0
IN05B033 (L)1GABA0.10.1%0.0
INXXX035 (R)1GABA0.10.1%0.0
INXXX045 (L)1unc0.10.1%0.0
IN01A029 (L)1ACh0.10.1%0.0
SNta311ACh0.10.1%0.0
IN23B037 (R)1ACh0.10.1%0.0
AN09B009 (L)1ACh0.10.1%0.0

Outputs

downstream
partner
#NTconns
SNta19,SNta37
%
Out
CV
INXXX027 (L)2ACh37.66.5%0.1
IN23B009 (R)2ACh325.6%0.6
ANXXX027 (L)7ACh315.4%0.6
AN05B009 (L)2GABA29.75.2%0.5
IN06B070 (L)4GABA21.43.7%0.3
SNta3723ACh21.13.7%1.0
SNta19,SNta377ACh19.93.5%0.3
IN01B003 (R)1GABA19.73.4%0.0
AN09B009 (L)3ACh17.63.1%1.2
SNta2022ACh17.13.0%0.7
IN23B037 (R)1ACh15.12.6%0.0
IN23B084 (R)2ACh14.72.6%0.2
IN23B017 (R)1ACh12.72.2%0.0
IN13B025 (L)1GABA122.1%0.0
IN14A009 (L)1Glu111.9%0.0
AN01B002 (R)3GABA10.11.8%1.2
IN23B023 (R)2ACh9.61.7%0.8
IN23B032 (R)2ACh9.61.7%0.3
DNge104 (L)1GABA9.31.6%0.0
AN17A018 (R)1ACh8.91.5%0.0
IN23B020 (R)1ACh7.41.3%0.0
IN03A007 (R)1ACh7.31.3%0.0
IN23B013 (R)1ACh6.91.2%0.0
IN04B044 (R)3ACh6.71.2%0.6
IN13A007 (R)1GABA61.0%0.0
IN04B001 (R)1ACh61.0%0.0
IN01B001 (R)1GABA5.91.0%0.0
IN23B049 (R)1ACh5.71.0%0.0
IN17B006 (R)1GABA5.61.0%0.0
IN23B040 (R)1ACh5.30.9%0.0
IN20A.22A007 (R)2ACh5.10.9%0.1
INXXX004 (R)1GABA50.9%0.0
AN08B012 (L)1ACh4.60.8%0.0
IN23B007 (R)1ACh4.60.8%0.0
IN05B020 (L)1GABA4.40.8%0.0
IN17A013 (R)1ACh4.30.7%0.0
IN13B026 (L)2GABA4.10.7%0.9
IN12A009 (R)1ACh40.7%0.0
IN04B068 (R)6ACh40.7%0.9
IN04B088 (R)2ACh3.90.7%0.0
INXXX045 (R)3unc3.90.7%1.0
SNta323ACh3.70.6%0.9
IN14A002 (L)1Glu3.40.6%0.0
IN05B010 (L)2GABA3.40.6%0.9
IN09B014 (L)1ACh3.40.6%0.0
AN08B012 (R)1ACh3.30.6%0.0
IN04B096 (R)2ACh3.30.6%0.9
IN03A031 (R)1ACh30.5%0.0
IN23B041 (R)1ACh30.5%0.0
IN05B001 (R)1GABA2.90.5%0.0
IN06B027 (R)1GABA2.90.5%0.0
IN01A059 (L)2ACh2.60.4%0.9
IN05B036 (L)1GABA2.30.4%0.0
INXXX143 (R)1ACh2.30.4%0.0
IN03A097 (R)3ACh2.10.4%0.3
IN05B001 (L)1GABA2.10.4%0.0
SNta342ACh20.3%0.9
IN14A011 (L)1Glu20.3%0.0
IN04B100 (R)2ACh20.3%0.9
IN04B054_c (R)2ACh20.3%0.4
INXXX213 (R)1GABA1.90.3%0.0
IN19A045 (R)3GABA1.90.3%0.1
IN04B080 (R)2ACh1.70.3%0.8
IN23B033 (R)1ACh1.60.3%0.0
IN03A039 (R)1ACh1.60.3%0.0
IN17A020 (R)1ACh1.60.3%0.0
IN01B020 (R)2GABA1.60.3%0.5
IN23B046 (R)2ACh1.60.3%0.8
AN17A015 (R)1ACh1.60.3%0.0
AN13B002 (L)1GABA1.40.2%0.0
IN04B054_a (R)1ACh1.40.2%0.0
IN01A011 (L)1ACh1.30.2%0.0
IN23B053 (R)1ACh1.30.2%0.0
AN05B036 (L)1GABA1.10.2%0.0
IN01B031_b (R)1GABA1.10.2%0.0
INXXX219 (R)1unc10.2%0.0
IN23B068 (R)2ACh10.2%0.7
IN01B031_a (R)1GABA0.90.1%0.0
IN08A007 (R)1Glu0.90.1%0.0
IN23B018 (R)2ACh0.90.1%0.7
IN23B036 (R)2ACh0.90.1%0.0
IN19A022 (R)1GABA0.90.1%0.0
IN19B021 (R)2ACh0.90.1%0.3
IN23B047 (R)1ACh0.70.1%0.0
IN17A044 (R)1ACh0.70.1%0.0
IN20A.22A008 (R)1ACh0.70.1%0.0
IN04B064 (R)2ACh0.70.1%0.6
IN16B033 (R)1Glu0.70.1%0.0
AN09B035 (L)1Glu0.70.1%0.0
AN05B005 (L)1GABA0.70.1%0.0
IN12A048 (R)1ACh0.70.1%0.0
IN01A029 (L)1ACh0.70.1%0.0
SNta294ACh0.70.1%0.3
IN09A003 (R)1GABA0.60.1%0.0
IN23B014 (R)1ACh0.60.1%0.0
AN17A024 (R)1ACh0.60.1%0.0
IN23B058 (R)2ACh0.60.1%0.0
IN03A064 (R)1ACh0.60.1%0.0
INXXX044 (R)1GABA0.60.1%0.0
SNta191ACh0.60.1%0.0
IN19A019 (R)1ACh0.60.1%0.0
IN01A036 (L)1ACh0.40.1%0.0
SNta431ACh0.40.1%0.0
AN23B003 (R)1ACh0.40.1%0.0
INXXX402 (R)1ACh0.40.1%0.0
IN13A052 (R)1GABA0.30.0%0.0
IN01A027 (L)1ACh0.30.0%0.0
AN05B005 (R)1GABA0.30.0%0.0
IN23B028 (R)1ACh0.30.0%0.0
IN05B017 (R)1GABA0.30.0%0.0
IN03B021 (R)1GABA0.30.0%0.0
AN10B047 (R)1ACh0.30.0%0.0
IN23B054 (R)1ACh0.30.0%0.0
IN13B054 (L)1GABA0.30.0%0.0
IN10B059 (R)1ACh0.30.0%0.0
IN01A061 (L)1ACh0.30.0%0.0
IN14A040 (L)1Glu0.30.0%0.0
IN23B030 (R)1ACh0.30.0%0.0
IN17A019 (R)1ACh0.30.0%0.0
IN17B010 (R)1GABA0.30.0%0.0
IN13A004 (R)1GABA0.30.0%0.0
IN14A036 (L)1Glu0.10.0%0.0
IN04B078 (R)1ACh0.10.0%0.0
INXXX045 (L)1unc0.10.0%0.0
INXXX038 (R)1ACh0.10.0%0.0
AN05B062 (R)1GABA0.10.0%0.0
AN05B099 (L)1ACh0.10.0%0.0
IN14A025 (L)1Glu0.10.0%0.0
AN17A014 (R)1ACh0.10.0%0.0
AN09B029 (L)1ACh0.10.0%0.0
IN13B007 (L)1GABA0.10.0%0.0
ANXXX170 (L)1ACh0.10.0%0.0
AN10B039 (R)1ACh0.10.0%0.0
AN05B062 (L)1GABA0.10.0%0.0
IN13B060 (L)1GABA0.10.0%0.0
IN00A009 (M)1GABA0.10.0%0.0
IN01B014 (R)1GABA0.10.0%0.0
IN13B011 (L)1GABA0.10.0%0.0
IN00A002 (M)1GABA0.10.0%0.0
AN05B049_b (L)1GABA0.10.0%0.0
DNge102 (R)1Glu0.10.0%0.0
SNta311ACh0.10.0%0.0
IN12B011 (L)1GABA0.10.0%0.0
INXXX054 (R)1ACh0.10.0%0.0
IN01B002 (R)1GABA0.10.0%0.0
IN09B008 (L)1Glu0.10.0%0.0
ANXXX092 (L)1ACh0.10.0%0.0
IN23B045 (R)1ACh0.10.0%0.0
IN01A031 (L)1ACh0.10.0%0.0
DNd02 (L)1unc0.10.0%0.0
IN03A095 (R)1ACh0.10.0%0.0
IN20A.22A004 (R)1ACh0.10.0%0.0
IN13A005 (R)1GABA0.10.0%0.0
IN13B004 (L)1GABA0.10.0%0.0