Male CNS – Cell Type Explorer

SNta03(L)

39
Total Neurons
Right: 19 | Left: 20
log ratio : 0.07
9,686
Total Synapses
Post: 4,579 | Pre: 5,107
log ratio : 0.16
484.3
Mean Synapses
Post: 228.9 | Pre: 255.3
log ratio : 0.16
ACh(96.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T3)(L)2,28950.0%0.092,43647.7%
HTct(UTct-T3)(L)1,81439.6%0.222,11841.5%
VNC-unspecified3497.6%0.153887.6%
ANm1232.7%0.351573.1%
DMetaN(L)40.1%1.0080.2%

Connectivity

Inputs

upstream
partner
#NTconns
SNta03
%
In
CV
SNta0320ACh5625.9%0.3
IN06B064 (R)3GABA42.019.5%1.1
IN06B083 (R)2GABA27.412.7%0.7
IN19A057 (L)2GABA24.311.3%0.5
IN19A049 (L)1GABA16.27.5%0.0
IN13A004 (L)1GABA14.66.7%0.0
IN17B006 (L)1GABA9.34.3%0.0
IN05B016 (L)1GABA4.42.0%0.0
IN06B017 (R)1GABA3.41.6%0.0
IN19A047 (L)1GABA3.01.4%0.0
IN05B016 (R)1GABA2.61.2%0.0
IN05B001 (L)1GABA2.61.2%0.0
IN09A005 (R)1unc1.60.8%0.0
AN05B029 (L)1GABA1.40.6%0.0
IN05B001 (R)1GABA0.80.4%0.0
IN13A030 (L)2GABA0.80.4%0.9
AN01B002 (L)2GABA0.60.3%0.5
SNpp121ACh0.50.2%0.0
IN09A005 (L)2unc0.50.2%0.0
IN01A031 (R)2ACh0.20.1%0.6
IN01A029 (R)1ACh0.20.1%0.0
SNpp153ACh0.20.1%0.6
DNge150 (M)1unc0.20.1%0.0
AN05B015 (R)1GABA0.20.1%0.0
AN05B009 (R)1GABA0.10.1%0.0
AN27X004 (R)1HA0.10.1%0.0
IN00A002 (M)1GABA0.10.1%0.0
AN08B016 (R)1GABA0.10.0%0.0
AN05B068 (R)2GABA0.10.0%0.0
IN23B045 (L)2ACh0.10.0%0.0
INXXX044 (L)1GABA0.10.0%0.0
DNge104 (R)1GABA0.10.0%0.0
IN17A060 (L)1Glu0.10.0%0.0
IN03B079 (L)2GABA0.10.0%0.0
IN10B023 (R)1ACh0.10.0%0.0
IN00A017 (M)1unc0.10.0%0.0
IN17B015 (L)1GABA0.10.0%0.0
IN27X003 (L)1unc0.10.0%0.0
DNge122 (R)1GABA0.10.0%0.0
IN00A001 (M)1unc0.10.0%0.0
IN23B053 (L)1ACh0.10.0%0.0
SNta231ACh0.10.0%0.0
IN23B055 (L)1ACh0.10.0%0.0
hi2 MN (L)1unc0.10.0%0.0
AN05B045 (R)1GABA0.10.0%0.0
IN12B011 (R)1GABA0.10.0%0.0
IN27X003 (R)1unc0.10.0%0.0
IN03B049 (L)1GABA0.10.0%0.0
INXXX056 (R)1unc0.10.0%0.0
EA00B006 (M)1unc0.10.0%0.0
hi2 MN (R)1unc0.10.0%0.0
MNad29 (L)1unc0.10.0%0.0
INXXX133 (L)1ACh0.10.0%0.0
AN09B023 (R)1ACh0.10.0%0.0
SApp1ACh0.10.0%0.0
IN23B062 (R)1ACh0.10.0%0.0
INXXX238 (R)1ACh0.10.0%0.0

Outputs

downstream
partner
#NTconns
SNta03
%
Out
CV
SNta0320ACh567.1%0.3
IN03B079 (L)4GABA51.26.5%0.6
IN01A031 (R)3ACh47.86.1%0.7
IN03B049 (L)2GABA40.95.2%1.0
IN03B056 (L)2GABA37.14.7%0.0
IN19A057 (L)2GABA28.93.7%0.5
hi2 MN (L)2unc28.43.6%0.2
INXXX044 (L)1GABA24.63.1%0.0
IN06B083 (R)2GABA22.32.8%0.6
IN19A049 (L)1GABA22.22.8%0.0
IN17A060 (L)1Glu19.92.5%0.0
IN01A029 (R)1ACh19.82.5%0.0
IN06B017 (R)1GABA19.32.5%0.0
AN05B009 (R)1GABA17.82.3%0.0
IN06B064 (R)3GABA16.92.2%0.8
IN13A030 (L)4GABA16.72.1%0.6
AN05B053 (R)2GABA16.52.1%0.0
INXXX198 (R)1GABA15.52.0%0.0
AN01B002 (L)3GABA13.41.7%0.8
IN19A026 (L)1GABA13.11.7%0.0
ANXXX033 (L)1ACh12.11.5%0.0
IN11A046 (R)1ACh10.41.3%0.0
IN17B015 (L)1GABA10.21.3%0.0
IN06A050 (L)2GABA10.21.3%0.8
IN10B023 (R)1ACh10.21.3%0.0
IN09B014 (R)1ACh9.41.2%0.0
IN23B058 (L)2ACh91.1%1.0
IN17B004 (L)1GABA8.91.1%0.0
IN19A047 (L)1GABA7.51.0%0.0
INXXX133 (L)1ACh7.51.0%0.0
IN19B016 (L)1ACh7.50.9%0.0
hiii2 MN (L)1unc7.10.9%0.0
INXXX294 (L)1ACh60.8%0.0
MNad26 (L)1unc5.20.7%0.0
INXXX073 (R)1ACh5.10.6%0.0
IN23B061 (L)1ACh5.00.6%0.0
MNhl59 (R)1unc4.80.6%0.0
IN01A027 (R)1ACh4.70.6%0.0
AN05B096 (L)1ACh4.50.6%0.0
ANXXX055 (R)1ACh4.30.5%0.0
MNad24 (L)1unc4.30.5%0.0
AN23B003 (L)1ACh4.20.5%0.0
INXXX119 (R)1GABA40.5%0.0
IN05B028 (R)2GABA3.80.5%0.1
hi2 MN (R)1unc3.50.5%0.0
IN04B037 (L)1ACh3.50.4%0.0
MNhl59 (L)1unc3.50.4%0.0
IN03A052 (L)4ACh3.50.4%0.8
AN06B039 (R)2GABA3.50.4%0.7
INXXX238 (R)1ACh3.30.4%0.0
IN23B060 (L)1ACh3.00.4%0.0
IN05B016 (L)1GABA2.80.3%0.0
MNad14 (L)1unc2.70.3%0.0
AN05B029 (L)1GABA2.50.3%0.0
MNad29 (L)1unc2.40.3%0.0
MNad30 (L)1unc2.30.3%0.0
IN01A059 (R)1ACh2.20.3%0.0
IN10B016 (R)1ACh2.20.3%0.0
IN04B056 (L)1ACh2.00.3%0.0
AN06B009 (L)1GABA20.3%0.0
IN05B016 (R)1GABA20.3%0.0
MNad30 (R)1unc1.90.2%0.0
IN11A047 (R)1ACh1.70.2%0.0
DNge150 (M)1unc1.60.2%0.0
IN06A025 (L)1GABA1.60.2%0.0
IN17A011 (L)1ACh1.60.2%0.0
IN18B037 (L)1ACh1.50.2%0.0
DNge104 (R)1GABA1.40.2%0.0
INXXX063 (R)1GABA1.40.2%0.0
ANXXX027 (R)3ACh1.20.2%0.7
IN19B016 (R)1ACh1.10.1%0.0
IN02A004 (L)1Glu1.10.1%0.0
IN18B013 (L)1ACh1.10.1%0.0
INXXX199 (L)1GABA1.10.1%0.0
IN06A129 (L)2GABA1.10.1%0.4
INXXX315 (L)1ACh1.10.1%0.0
IN12B002 (R)1GABA10.1%0.0
DNge122 (R)1GABA0.90.1%0.0
IN13A004 (L)1GABA0.80.1%0.0
IN17B006 (L)1GABA0.80.1%0.0
IN12B016 (L)1GABA0.80.1%0.0
AN17B011 (L)1GABA0.80.1%0.0
MNad46 (L)1unc0.70.1%0.0
SNpp121ACh0.60.1%0.0
IN09A005 (L)2unc0.60.1%0.5
AN05B004 (L)1GABA0.60.1%0.0
IN03B032 (L)1GABA0.50.1%0.0
AN09B027 (R)1ACh0.50.1%0.0
IN18B040 (L)1ACh0.50.1%0.0
IN00A001 (M)1unc0.50.1%0.0
IN23B058 (R)1ACh0.50.1%0.0
IN04B068 (L)1ACh0.50.1%0.0
INXXX180 (L)1ACh0.40.1%0.0
IN04B082 (L)1ACh0.40.1%0.0
IN23B045 (L)2ACh0.40.1%0.5
AN05B004 (R)1GABA0.40.1%0.0
IN04B061 (L)1ACh0.40.1%0.0
AN01A021 (R)1ACh0.40.1%0.0
IN27X003 (L)1unc0.40.1%0.0
IN18B038 (L)1ACh0.40.1%0.0
IN17B014 (L)1GABA0.30.0%0.0
hiii2 MN (R)1unc0.30.0%0.0
AN10B047 (L)1ACh0.30.0%0.0
IN18B028 (L)1ACh0.30.0%0.0
AN05B040 (L)1GABA0.30.0%0.0
Sternotrochanter MN (L)1unc0.30.0%0.0
IN05B001 (L)1GABA0.30.0%0.0
IN05B001 (R)1GABA0.30.0%0.0
IN12B002 (L)1GABA0.30.0%0.0
AN05B068 (L)1GABA0.30.0%0.0
AN05B068 (R)2GABA0.30.0%0.3
IN23B062 (R)1ACh0.30.0%0.0
INXXX100 (L)2ACh0.20.0%0.6
AN17A018 (L)1ACh0.20.0%0.0
IN27X003 (R)1unc0.20.0%0.0
INXXX224 (R)1ACh0.20.0%0.0
Sternal anterior rotator MN (L)1unc0.20.0%0.0
SNpp153ACh0.20.0%0.3
INXXX332 (R)1GABA0.20.0%0.0
INXXX387 (L)1ACh0.20.0%0.0
IN03A055 (L)1ACh0.20.0%0.0
IN06A049 (L)1GABA0.20.0%0.0
ANXXX024 (R)1ACh0.20.0%0.0
AN05B062 (L)1GABA0.20.0%0.0
IN17B010 (L)1GABA0.20.0%0.0
AN09B029 (R)1ACh0.10.0%0.0
IN04B001 (L)1ACh0.10.0%0.0
IN07B039 (L)1ACh0.10.0%0.0
INXXX056 (R)1unc0.10.0%0.0
IN17B001 (L)1GABA0.10.0%0.0
AN17A012 (L)1ACh0.10.0%0.0
IN11B005 (L)1GABA0.10.0%0.0
AN18B002 (L)1ACh0.10.0%0.0
IN23B014 (L)1ACh0.10.0%0.0
IN03A097 (L)1ACh0.10.0%0.0
IN23B037 (L)1ACh0.10.0%0.0
INXXX027 (R)1ACh0.10.0%0.0
INXXX004 (L)1GABA0.10.0%0.0
IN00A066 (M)1GABA0.10.0%0.0
IN12A009 (L)1ACh0.10.0%0.0
IN13B011 (R)1GABA0.10.0%0.0
IN00A017 (M)1unc0.10.0%0.0
IN04B054_a (L)1ACh0.10.0%0.0
IN02A066 (L)1Glu0.10.0%0.0
IN17A043, IN17A046 (L)1ACh0.10.0%0.0
INXXX339 (R)1ACh0.10.0%0.0
IN00A002 (M)1GABA0.10.0%0.0
IN09A005 (R)1unc0.10.0%0.0
SNpp142ACh0.10.0%0.0
IN07B090 (L)1ACh0.10.0%0.0
AN06A030 (L)1Glu0.10.0%0.0
AN27X004 (R)1HA0.10.0%0.0
AN09B023 (L)1ACh0.10.0%0.0
ANXXX092 (R)1ACh0.10.0%0.0
IN03A082 (L)1ACh0.10.0%0.0
SNxx221ACh0.10.0%0.0
IN23B053 (L)1ACh0.10.0%0.0
SNta231ACh0.10.0%0.0
IN09A029 (L)1GABA0.10.0%0.0
IN14A006 (R)1Glu0.10.0%0.0
IN23B009 (L)1ACh0.10.0%0.0
AN05B054_a (R)1GABA0.10.0%0.0
IN09A053 (L)1GABA0.10.0%0.0
IN12B071 (R)1GABA0.10.0%0.0
IN03A074 (L)1ACh0.10.0%0.0
INXXX472 (L)1GABA0.10.0%0.0
IN03A011 (L)1ACh0.10.0%0.0
ANXXX169 (L)1Glu0.10.0%0.0
AN08B010 (L)1ACh0.10.0%0.0
IN04B022 (L)1ACh0.10.0%0.0
IN07B038 (L)1ACh0.10.0%0.0
IN12B016 (R)1GABA0.10.0%0.0
INXXX147 (L)1ACh0.10.0%0.0
SNpp211ACh0.10.0%0.0
IN17A075 (L)1ACh0.10.0%0.0
INXXX022 (R)1ACh0.10.0%0.0
IN12A011 (L)1ACh0.10.0%0.0
SApp1ACh0.10.0%0.0
SApp09,SApp221ACh0.10.0%0.0