Male CNS – Cell Type Explorer

SNpp60(L)

41
Total Neurons
Right: 18 | Left: 23
log ratio : 0.35
8,519
Total Synapses
Post: 3,806 | Pre: 4,713
log ratio : 0.31
370.4
Mean Synapses
Post: 165.5 | Pre: 204.9
log ratio : 0.31
ACh(88.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
mVAC(T3)(L)1,76546.4%0.232,07644.0%
mVAC(T2)(L)1,04827.5%0.441,42230.2%
mVAC(T1)(L)39610.4%0.6562313.2%
LegNp(T3)(L)2777.3%-0.262314.9%
VNC-unspecified1674.4%-0.91891.9%
LegNp(T1)(L)551.4%1.481533.2%
LegNp(T2)(L)902.4%0.351152.4%
MetaLN(L)30.1%0.0030.1%
Ov(L)40.1%-2.0010.0%
MesoLN(L)10.0%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNpp60
%
In
CV
SNpp6022ACh2217.3%0.7
IN13A008 (L)3GABA19.315.1%0.6
IN00A007 (M)2GABA8.46.6%0.9
AN12B004 (L)3GABA8.36.5%0.3
AN12B004 (R)3GABA5.84.6%0.3
IN00A011 (M)6GABA5.44.2%1.0
IN09A058 (L)2GABA4.43.5%0.1
IN17B008 (R)1GABA4.03.1%0.0
SNpp564ACh3.62.8%0.7
SNpp4712ACh2.92.3%0.8
IN17B008 (L)1GABA2.82.2%0.0
IN09A073 (L)3GABA2.41.9%0.5
IN00A004 (M)2GABA2.31.8%0.1
IN09A001 (L)3GABA2.21.7%0.7
IN09A022 (L)5GABA1.91.5%0.9
AN17B008 (R)2GABA1.71.4%0.9
AN17B008 (L)1GABA1.71.3%0.0
ANXXX007 (R)2GABA1.71.3%0.7
IN19A045 (L)2GABA1.71.3%0.6
INXXX007 (R)1GABA1.61.3%0.0
IN12B004 (R)1GABA1.61.2%0.0
SNpp574ACh1.51.2%1.0
IN19A042 (L)2GABA1.31.1%0.7
IN09A051 (L)1GABA1.31.1%0.0
IN09A032 (L)1GABA1.00.8%0.0
IN09A038 (L)2GABA0.80.6%0.3
SNpp407ACh0.80.6%0.6
IN09A067 (L)1GABA0.70.5%0.0
IN00A028 (M)1GABA0.60.5%0.0
ANXXX007 (L)4GABA0.60.5%0.3
IN00A018 (M)2GABA0.60.4%0.2
IN00A003 (M)1GABA0.50.4%0.0
IN00A005 (M)1GABA0.50.4%0.0
SNpp024ACh0.50.4%0.5
IN00A020 (M)2GABA0.50.4%0.3
IN09A041 (L)1GABA0.40.3%0.0
IN12B004 (L)1GABA0.40.3%0.0
IN09A039 (L)2GABA0.40.3%0.6
IN09A062 (L)1GABA0.40.3%0.0
SNpp182ACh0.30.3%0.8
DNg23 (L)1GABA0.30.3%0.0
IN19A056 (R)1GABA0.30.3%0.0
IN00A026 (M)2GABA0.30.3%0.2
IN10B050 (L)3ACh0.30.3%0.6
IN00A014 (M)2GABA0.30.3%0.5
IN09A048 (L)1GABA0.30.2%0.0
IN09A050 (L)1GABA0.30.2%0.0
IN10B054 (L)2ACh0.30.2%0.1
IN05B001 (R)1GABA0.30.2%0.0
INXXX280 (L)2GABA0.30.2%0.4
IN17B010 (L)1GABA0.30.2%0.0
IN09A018 (L)3GABA0.30.2%0.4
IN09A053 (L)2GABA0.30.2%0.3
IN00A049 (M)1GABA0.20.2%0.0
IN23B024 (L)1ACh0.20.2%0.0
IN09A024 (L)1GABA0.20.2%0.0
IN10B044 (L)4ACh0.20.2%0.3
IN09A061 (L)1GABA0.20.1%0.0
AN09B036 (L)1ACh0.20.1%0.0
IN09A020 (L)1GABA0.10.1%0.0
DNd02 (L)1unc0.10.1%0.0
IN09A070 (L)1GABA0.10.1%0.0
AN10B022 (R)1ACh0.10.1%0.0
IN09A027 (L)2GABA0.10.1%0.3
IN19A082 (L)1GABA0.10.1%0.0
IN09A028 (L)1GABA0.10.1%0.0
INXXX056 (R)1unc0.10.1%0.0
IN05B010 (R)1GABA0.10.1%0.0
IN09A052 (L)1GABA0.10.1%0.0
ANXXX157 (L)1GABA0.10.1%0.0
AN10B020 (R)2ACh0.10.1%0.0
AN17B007 (R)1GABA0.10.1%0.0
AN08B018 (R)2ACh0.10.1%0.0
IN10B059 (L)2ACh0.10.1%0.0
AN10B048 (L)2ACh0.10.1%0.0
SNpp511ACh0.00.0%0.0
AN10B019 (L)1ACh0.00.0%0.0
IN19A088_b (L)1GABA0.00.0%0.0
DNge138 (M)1unc0.00.0%0.0
IN09A078 (L)1GABA0.00.0%0.0
IN01B007 (L)1GABA0.00.0%0.0
ANXXX120 (R)1ACh0.00.0%0.0
IN23B028 (L)1ACh0.00.0%0.0
AN08B025 (R)1ACh0.00.0%0.0
IN10B041 (L)1ACh0.00.0%0.0
IN09A016 (L)1GABA0.00.0%0.0
IN23B045 (L)1ACh0.00.0%0.0
AN08B018 (L)1ACh0.00.0%0.0
IN09A044 (R)1GABA0.00.0%0.0
IN09A019 (L)1GABA0.00.0%0.0
AN12B006 (L)1unc0.00.0%0.0
IN14A052 (R)1Glu0.00.0%0.0
IN09A075 (L)1GABA0.00.0%0.0
IN00A019 (M)1GABA0.00.0%0.0
IN01B097 (L)1GABA0.00.0%0.0
IN10B055 (L)1ACh0.00.0%0.0
IN13B096_a (R)1GABA0.00.0%0.0
IN14A078 (R)1Glu0.00.0%0.0
IN19A065 (L)1GABA0.00.0%0.0
IN23B048 (L)1ACh0.00.0%0.0
IN10B040 (L)1ACh0.00.0%0.0
IN13B014 (R)1GABA0.00.0%0.0
IN23B074 (L)1ACh0.00.0%0.0
IN17B003 (L)1GABA0.00.0%0.0
IN10B058 (L)1ACh0.00.0%0.0
AN10B027 (R)1ACh0.00.0%0.0
AN08B024 (R)1ACh0.00.0%0.0

Outputs

downstream
partner
#NTconns
SNpp60
%
Out
CV
AN08B018 (R)6ACh48.37.9%1.3
IN00A011 (M)6GABA46.47.6%0.5
AN10B020 (R)3ACh29.64.9%0.5
AN08B018 (L)7ACh28.94.7%1.0
IN09A016 (L)3GABA26.64.4%0.3
IN10B044 (L)6ACh25.74.2%0.8
IN00A003 (M)1GABA233.8%0.0
AN10B020 (L)3ACh22.73.7%1.1
SNpp6022ACh223.6%0.8
IN10B058 (L)13ACh20.33.3%1.1
IN23B024 (L)3ACh18.73.1%0.7
IN10B054 (L)3ACh18.53.0%0.5
AN10B022 (R)3ACh17.32.9%0.1
IN09A022 (L)6GABA13.82.3%0.7
INXXX007 (R)1GABA13.42.2%0.0
IN09A053 (L)2GABA12.92.1%0.5
IN10B033 (L)3ACh10.61.7%0.8
AN12B004 (R)3GABA10.21.7%0.6
ANXXX120 (R)2ACh10.01.6%0.4
IN00A020 (M)3GABA8.31.4%0.4
IN10B050 (L)5ACh7.61.3%1.4
ANXXX157 (L)1GABA7.61.2%0.0
IN00A018 (M)2GABA7.31.2%0.5
IN00A007 (M)2GABA7.01.1%1.0
IN09A039 (L)5GABA6.91.1%1.4
IN00A026 (M)6GABA6.51.1%0.7
IN09A013 (L)3GABA6.11.0%1.0
AN10B022 (L)2ACh5.91.0%0.3
AN12B004 (L)3GABA5.91.0%0.5
IN09A044 (L)3GABA5.70.9%1.3
IN10B028 (L)4ACh5.10.8%0.9
IN09A024 (L)4GABA4.90.8%1.1
AN10B019 (R)3ACh4.70.8%0.5
AN10B019 (L)3ACh4.50.7%0.3
IN01B007 (L)3GABA4.20.7%0.7
IN09A038 (L)2GABA40.7%0.4
IN10B041 (L)3ACh4.00.7%0.7
IN09A044 (R)1GABA4.00.7%0.0
SNpp4713ACh3.80.6%1.0
ANXXX007 (R)3GABA3.70.6%1.1
IN00A019 (M)2GABA3.30.5%0.7
IN00A014 (M)3GABA3.10.5%1.3
IN13A008 (L)3GABA2.30.4%0.8
IN23B074 (L)2ACh2.20.4%0.1
IN10B042 (L)5ACh2.10.3%0.5
IN10B052 (L)3ACh2.10.3%1.2
ANXXX120 (L)2ACh2.10.3%0.1
AN19B036 (R)2ACh1.80.3%0.0
SNpp564ACh1.70.3%0.5
IN09A027 (L)3GABA1.60.3%0.9
SNpp573ACh1.60.3%0.6
IN00A028 (M)3GABA1.60.3%0.5
IN10B057 (L)9ACh1.40.2%1.3
SNpp407ACh1.40.2%1.1
IN09A075 (L)1GABA1.30.2%0.0
AN08B024 (L)2ACh1.30.2%0.3
IN12B004 (L)1GABA1.20.2%0.0
AN12B006 (L)1unc1.20.2%0.0
IN10B059 (L)4ACh1.20.2%0.6
AN12B006 (R)1unc1.10.2%0.0
AN10B027 (R)3ACh1.10.2%1.1
IN13B044 (R)2GABA1.10.2%0.0
IN10B055 (L)7ACh1.10.2%0.4
AN10B033 (L)2ACh10.2%0.7
IN09A093 (L)3GABA1.00.2%1.2
AN10B048 (L)2ACh1.00.2%0.4
IN13B057 (R)1GABA0.90.2%0.0
IN13B065 (R)2GABA0.90.1%0.9
ANXXX007 (L)1GABA0.90.1%0.0
IN09A028 (L)1GABA0.90.1%0.0
IN09A050 (L)2GABA0.90.1%0.5
AN08B024 (R)2ACh0.70.1%0.4
IN10B043 (L)2ACh0.70.1%0.1
AN10B029 (R)2ACh0.70.1%0.1
IN09A031 (L)1GABA0.70.1%0.0
IN23B048 (L)1ACh0.70.1%0.0
AN19B036 (L)2ACh0.60.1%0.4
IN09A020 (L)1GABA0.60.1%0.0
AN10B029 (L)2ACh0.60.1%0.8
IN13B054 (R)1GABA0.50.1%0.0
ANXXX098 (L)3ACh0.50.1%0.7
IN09A013 (R)1GABA0.50.1%0.0
IN09A058 (L)2GABA0.50.1%0.3
IN12B004 (R)1GABA0.50.1%0.0
IN23B044, IN23B057 (L)2ACh0.50.1%0.8
ANXXX098 (R)3ACh0.50.1%0.5
IN00A005 (M)1GABA0.50.1%0.0
IN01B025 (L)1GABA0.40.1%0.0
IN09A091 (L)2GABA0.40.1%0.8
IN09A018 (L)3GABA0.40.1%1.0
IN17B008 (R)1GABA0.40.1%0.0
SNpp184ACh0.40.1%0.7
IN09B008 (R)2Glu0.40.1%0.8
IN09A073 (L)3GABA0.30.1%0.9
SNpp023ACh0.30.1%0.5
IN00A004 (M)2GABA0.30.1%0.5
IN13B018 (R)1GABA0.30.1%0.0
IN14A120 (R)1Glu0.30.1%0.0
AN09B015 (R)1ACh0.30.1%0.0
IN09A032 (L)1GABA0.30.1%0.0
AN08B025 (L)1ACh0.30.1%0.0
AN08B028 (L)1ACh0.30.1%0.0
AN17B008 (R)2GABA0.30.1%0.7
IN23B007 (L)1ACh0.30.0%0.0
IN17A013 (L)1ACh0.30.0%0.0
IN00A012 (M)1GABA0.30.0%0.0
AN17A024 (L)1ACh0.30.0%0.0
IN01B101 (L)1GABA0.30.0%0.0
IN09B005 (L)2Glu0.30.0%0.0
IN19A045 (L)2GABA0.30.0%0.0
IN09B005 (R)1Glu0.30.0%0.0
AN08B025 (R)1ACh0.30.0%0.0
IN01B026 (L)1GABA0.20.0%0.0
IN03B011 (L)1GABA0.20.0%0.0
IN09A016 (R)1GABA0.20.0%0.0
IN09A093 (R)1GABA0.20.0%0.0
AN09B003 (R)1ACh0.20.0%0.0
IN23B018 (L)1ACh0.20.0%0.0
IN09A070 (L)2GABA0.20.0%0.0
IN10B040 (L)2ACh0.20.0%0.0
IN09A001 (L)2GABA0.20.0%0.5
IN23B086 (L)2ACh0.20.0%0.0
IN09A052 (L)2GABA0.20.0%0.0
IN17B008 (L)1GABA0.20.0%0.0
AN08B028 (R)1ACh0.10.0%0.0
IN09B008 (L)1Glu0.10.0%0.0
IN13B035 (R)1GABA0.10.0%0.0
IN01B038,IN01B056 (L)1GABA0.10.0%0.0
IN09A062 (L)1GABA0.10.0%0.0
IN14A109 (R)1Glu0.10.0%0.0
IN00A063 (M)1GABA0.10.0%0.0
IN13B004 (R)1GABA0.10.0%0.0
IN01B095 (L)2GABA0.10.0%0.3
DNc01 (L)1unc0.10.0%0.0
SNpp581ACh0.10.0%0.0
IN23B081 (L)2ACh0.10.0%0.3
AN10B047 (L)2ACh0.10.0%0.3
IN00A049 (M)1GABA0.10.0%0.0
AN10B024 (L)1ACh0.10.0%0.0
IN23B043 (L)2ACh0.10.0%0.3
IN20A.22A079 (L)1ACh0.10.0%0.0
AN10B045 (L)2ACh0.10.0%0.3
IN05B001 (R)1GABA0.10.0%0.0
AN09B034 (R)1ACh0.10.0%0.0
IN20A.22A070,IN20A.22A080 (L)1ACh0.10.0%0.0
IN00A031 (M)1GABA0.10.0%0.0
AN17B009 (L)1GABA0.10.0%0.0
IN01B008 (L)1GABA0.10.0%0.0
IN01B097 (L)1GABA0.10.0%0.0
IN01B057 (L)1GABA0.10.0%0.0
IN01B073 (L)1GABA0.10.0%0.0
IN23B067_d (L)1ACh0.10.0%0.0
IN23B056 (L)1ACh0.10.0%0.0
ANXXX027 (R)1ACh0.10.0%0.0
AN09B023 (R)2ACh0.10.0%0.0
IN09A094 (L)1GABA0.10.0%0.0
INXXX056 (R)1unc0.10.0%0.0
AN17B008 (L)1GABA0.10.0%0.0
IN19A042 (L)1GABA0.10.0%0.0
AN09B009 (R)2ACh0.10.0%0.0
IN23B040 (L)2ACh0.10.0%0.0
IN01B049 (L)2GABA0.10.0%0.0
IN23B008 (L)2ACh0.10.0%0.0
SApp231ACh0.00.0%0.0
IN09A074 (L)1GABA0.00.0%0.0
IN09A051 (L)1GABA0.00.0%0.0
IN23B045 (L)1ACh0.00.0%0.0
AN10B034 (L)1ACh0.00.0%0.0
SNpp011ACh0.00.0%0.0
ANXXX108 (L)1GABA0.00.0%0.0
IN20A.22A077 (L)1ACh0.00.0%0.0
IN09A095 (L)1GABA0.00.0%0.0
IN09A067 (L)1GABA0.00.0%0.0
DNg23 (L)1GABA0.00.0%0.0
AN17B007 (R)1GABA0.00.0%0.0
AN09B060 (R)1ACh0.00.0%0.0
IN17B001 (L)1GABA0.00.0%0.0
DNge141 (R)1GABA0.00.0%0.0
IN14A119 (R)1Glu0.00.0%0.0
IN11A032_d (L)1ACh0.00.0%0.0
IN01B064 (L)1GABA0.00.0%0.0
IN23B014 (L)1ACh0.00.0%0.0
IN21A008 (L)1Glu0.00.0%0.0
IN13B056 (R)1GABA0.00.0%0.0
IN13B021 (R)1GABA0.00.0%0.0
SNpp431ACh0.00.0%0.0
IN19A021 (L)1GABA0.00.0%0.0
IN19A065 (L)1GABA0.00.0%0.0
IN13B052 (R)1GABA0.00.0%0.0
IN13B058 (R)1GABA0.00.0%0.0
IN10B044 (R)1ACh0.00.0%0.0
IN09A017 (L)1GABA0.00.0%0.0
IN13B055 (R)1GABA0.00.0%0.0
IN14A036 (R)1Glu0.00.0%0.0
IN12B069 (R)1GABA0.00.0%0.0
IN12B025 (R)1GABA0.00.0%0.0
IN08B085_a (L)1ACh0.00.0%0.0
IN23B078 (L)1ACh0.00.0%0.0
IN03A040 (L)1ACh0.00.0%0.0
IN13B010 (R)1GABA0.00.0%0.0
IN09B022 (R)1Glu0.00.0%0.0
IN17B003 (L)1GABA0.00.0%0.0
AN09B004 (R)1ACh0.00.0%0.0
AN01B004 (L)1ACh0.00.0%0.0
ANXXX057 (R)1ACh0.00.0%0.0
DNg34 (L)1unc0.00.0%0.0