Male CNS – Cell Type Explorer

SNpp49 ⧉

4
Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,815
Synapses
Right: 1,061 | Left: 754
log ratio : -0.49
3,479
Connections
Right: 2,035 | Left: 1,444
log ratio : -0.49
ACh (93.3% CL)
Neurotransmitter
453.8
Synapses per Neuron
Right: 530.5 | Left: 377
log ratio : -0.49
869.8
Connections per Neuron
Right: 1,017.5 | Left: 722
log ratio : -0.49

Neuron Visualization ⧉ ⤓

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

Download neurons

Downloads one file per neuron that this page sends to the viewer (the neurons of this type plus any partners ticked in the tables below), packed into a single zip file. Neurons without a file are listed in missing_body_ids.txt inside the zip.

Format

screenshot of the 'copy URL' button in Neuroglancer Changes made inside Neuroglancer are invisible to the Cell Type Explorer. To download exactly the neurons selected in Neuroglancer, copy the URL from Neuroglancer and paste it here:

ROI Innervation (3 ROIs)

ROI Name∑
In
%
In
log
ratio
∑
Out
%
Out
LegNp(T2)62199.5%0.921,17498.6%
VNC-unspecified10.2%4.00161.3%
MesoLN20.3%-1.0010.1%

Connectivity

Inputs

upstream
partner
#NTconns
SNpp49
%
In
CV
IN19A0546GABA6451.8%0.3
IN19A0418GABA2621.1%0.8
SNpp494ACh11.29.1%0.4
SNpp509ACh5.24.3%0.5
SNpp483ACh32.4%0.2
IN19A0902GABA2.21.8%0.0
IN09A0011GABA1.81.4%0.0
IN19A1132GABA1.81.4%0.0
IN09A0091GABA10.8%0.0
IN09A0061GABA10.8%0.0
IN14A0101Glu10.8%0.0
IN13A0071GABA0.80.6%0.0
IN14A0281Glu0.50.4%0.0
IN09A0922GABA0.50.4%0.0
IN19A0421GABA0.50.4%0.0
IN13B0041GABA0.20.2%0.0
IN13A0571GABA0.20.2%0.0
IN04B0361ACh0.20.2%0.0
AN09B0071ACh0.20.2%0.0
IN13A0051GABA0.20.2%0.0
AN07B0051ACh0.20.2%0.0
IN19A0071GABA0.20.2%0.0
IN20A.22A0781ACh0.20.2%0.0
IN27X0041HA0.20.2%0.0
IN01B0801GABA0.20.2%0.0
IN13A0091GABA0.20.2%0.0
AN27X0041HA0.20.2%0.0

Outputs

downstream
partner
#NTconns
SNpp49
%
Out
CV
IN13A0022GABA110.814.8%0.0
IN13A0092GABA93.512.5%0.0
IN09A09212GABA72.29.7%0.5
IN13A0052GABA70.59.4%0.0
IN09A07910GABA51.56.9%0.5
AN07B0052ACh31.54.2%0.0
IN03A0062ACh24.83.3%0.0
IN20A.22A0656ACh18.22.4%0.3
IN13A0122GABA182.4%0.0
IN19A04110GABA172.3%1.0
IN09A0892GABA16.82.2%0.0
IN13B0132GABA14.21.9%0.0
Ti extensor MN4unc12.21.6%0.4
SNpp494ACh11.21.5%0.4
IN09A0841GABA8.51.1%0.0
IN19A0544GABA8.51.1%0.3
IN19A0052GABA8.51.1%0.0
IN20A.22A0463ACh8.21.1%0.6
IN13B0012GABA81.1%0.0
IN14A0343Glu7.81.0%0.1
IN21A0142Glu5.20.7%0.0
IN01B0222GABA4.50.6%0.0
IN13B0082GABA40.5%0.0
IN19A0483GABA3.80.5%0.4
IN14A0372Glu3.80.5%0.0
IN09A0042GABA3.80.5%0.0
IN13A0032GABA3.50.5%0.0
IN03B0201GABA3.20.4%0.0
IN19A0021GABA3.20.4%0.0
Tergotr. MN1unc3.20.4%0.0
IN13A0212GABA3.20.4%0.0
IN13A0383GABA30.4%0.5
IN13B0801GABA2.80.4%0.0
Acc. ti flexor MN2Glu2.20.3%0.0
IN08B0643ACh2.20.3%0.3
IN13A0072GABA2.20.3%0.0
IN13A0042GABA2.20.3%0.0
SNpp506ACh20.3%0.6
IN20A.22A0333ACh20.3%0.1
IN19A0072GABA20.3%0.0
IN13A0152GABA20.3%0.0
IN01A0361ACh1.80.2%0.0
IN21A0773Glu1.80.2%0.5
IN08B0602ACh1.80.2%0.0
IN01B0152GABA1.80.2%0.0
IN19A0904GABA1.80.2%0.4
MNml781Glu1.50.2%0.0
IN14A0071Glu1.50.2%0.0
IN03B0351GABA1.50.2%0.0
Tr flexor MN3Glu1.50.2%0.4
SNpp512ACh1.20.2%0.2
IN16B0951Glu1.20.2%0.0
MNml802Glu1.20.2%0.0
IN04B0713ACh1.20.2%0.3
IN19A0012GABA1.20.2%0.0
IN14A1053Glu1.20.2%0.0
IN09A0461GABA10.1%0.0
IN04B1081ACh10.1%0.0
IN14A0221Glu10.1%0.0
Sternotrochanter MN1unc10.1%0.0
IN01A0341ACh10.1%0.0
IN20A.22A0592ACh10.1%0.0
IN03A0272ACh10.1%0.0
IN03A0072ACh10.1%0.0
Sternal posterior rotator MN2unc10.1%0.0
IN13A0182GABA10.1%0.0
IN04B0332ACh10.1%0.0
IN09A0601GABA0.80.1%0.0
IN20A.22A0041ACh0.80.1%0.0
IN19A0131GABA0.80.1%0.0
IN23B0301ACh0.80.1%0.0
IN19A095,IN19A1271GABA0.80.1%0.0
IN14A0791Glu0.80.1%0.0
IN21A0351Glu0.80.1%0.0
IN14A0311Glu0.80.1%0.0
Pleural remotor/abductor MN1unc0.80.1%0.0
IN16B1171Glu0.80.1%0.0
IN09A0091GABA0.80.1%0.0
IN21A0111Glu0.80.1%0.0
AN10B0211ACh0.80.1%0.0
SNpp482ACh0.80.1%0.3
IN09A0211GABA0.80.1%0.0
IN14A0281Glu0.80.1%0.0
IN19A0731GABA0.80.1%0.0
IN14A0172Glu0.80.1%0.3
IN13B0182GABA0.80.1%0.0
IN20A.22A0742ACh0.80.1%0.0
IN03A0762ACh0.80.1%0.0
IN04B0622ACh0.80.1%0.0
IN19A0831GABA0.50.1%0.0
IN21A0151Glu0.50.1%0.0
IN14A0051Glu0.50.1%0.0
MNml761Glu0.50.1%0.0
IN20A.22A0891ACh0.50.1%0.0
IN09A0031GABA0.50.1%0.0
IN19A0321ACh0.50.1%0.0
IN21A0021Glu0.50.1%0.0
IN13A0641GABA0.50.1%0.0
IN14A0011GABA0.50.1%0.0
IN13A0361GABA0.50.1%0.0
IN09A0141GABA0.50.1%0.0
IN14A0101Glu0.50.1%0.0
INXXX4641ACh0.50.1%0.0
IN13A0441GABA0.50.1%0.0
IN16B0291Glu0.50.1%0.0
IN13A0252GABA0.50.1%0.0
IN14A0382Glu0.50.1%0.0
IN21A0382Glu0.50.1%0.0
IN19A1132GABA0.50.1%0.0
IN16B1131Glu0.20.0%0.0
IN20A.22A0781ACh0.20.0%0.0
IN21A0171ACh0.20.0%0.0
IN14A042,IN14A0471Glu0.20.0%0.0
IN20A.22A0581ACh0.20.0%0.0
IN13A0241GABA0.20.0%0.0
IN16B0411Glu0.20.0%0.0
IN14A0501Glu0.20.0%0.0
INXXX0831ACh0.20.0%0.0
IN14A0091Glu0.20.0%0.0
IN09B0081Glu0.20.0%0.0
AN04B0041ACh0.20.0%0.0
IN21A0011Glu0.20.0%0.0
AN10B0351ACh0.20.0%0.0
AN09B0071ACh0.20.0%0.0
IN13B0041GABA0.20.0%0.0
IN08A0061GABA0.20.0%0.0
IN03A0141ACh0.20.0%0.0
IN14A0431Glu0.20.0%0.0
IN13A0171GABA0.20.0%0.0
IN01A0301ACh0.20.0%0.0
IN20A.22A0391ACh0.20.0%0.0
IN13B0111GABA0.20.0%0.0
IN09B0051Glu0.20.0%0.0
IN09A0061GABA0.20.0%0.0
DNge0731ACh0.20.0%0.0
AN04A0011ACh0.20.0%0.0
IN14A0471Glu0.20.0%0.0
IN16B0651Glu0.20.0%0.0
IN14A0541Glu0.20.0%0.0
IN13B0541GABA0.20.0%0.0
IN14A0591Glu0.20.0%0.0
Fe reductor MN1Glu0.20.0%0.0
IN17A0011ACh0.20.0%0.0
IN20A.22A0051ACh0.20.0%0.0
IN14A0631Glu0.20.0%0.0
IN16B0421Glu0.20.0%0.0
IN04B0251ACh0.20.0%0.0
IN19B0121ACh0.20.0%0.0
IN13B0051GABA0.20.0%0.0
AN07B0111ACh0.20.0%0.0