Male CNS – Cell Type Explorer

SNpp46(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
274
Total Synapses
Post: 132 | Pre: 142
log ratio : 0.11
274
Mean Synapses
Post: 132 | Pre: 142
log ratio : 0.11
ACh(95.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
VNC-unspecified6549.2%0.308056.3%
LegNp(T3)(R)107.6%2.204632.4%
mVAC(T3)(R)4131.1%-2.5574.9%
LegNp(T1)(R)129.1%-0.5885.6%
mVAC(T2)(R)32.3%-1.5810.7%
Ov(R)10.8%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNpp46
%
In
CV
AN17B008 (R)1GABA4233.1%0.0
AN17B008 (L)1GABA2116.5%0.0
AN12B004 (R)1GABA2015.7%0.0
AN12B004 (L)2GABA1612.6%0.2
IN00A004 (M)2GABA129.4%0.7
DNg24 (L)1GABA43.1%0.0
IN09A032 (R)1GABA32.4%0.0
IN00A007 (M)1GABA32.4%0.0
SNpp022ACh32.4%0.3
IN00A014 (M)1GABA10.8%0.0
SNpp421ACh10.8%0.0
IN09A017 (R)1GABA10.8%0.0

Outputs

downstream
partner
#NTconns
SNpp46
%
Out
CV
IN00A014 (M)3GABA9424.4%0.5
IN09A032 (R)2GABA5013.0%0.5
IN09A029 (R)2GABA359.1%0.9
IN00A049 (M)2GABA215.5%0.0
IN09A019 (R)2GABA205.2%0.6
IN09A023 (R)2GABA205.2%0.4
IN09A019 (L)1GABA164.2%0.0
IN09A018 (R)3GABA133.4%0.3
IN00A004 (M)2GABA123.1%0.0
IN17A099 (R)2ACh102.6%0.6
IN17A109 (R)1ACh92.3%0.0
AN17B008 (R)2GABA71.8%0.7
IN06B078 (R)2GABA71.8%0.1
IN17A118 (R)1ACh61.6%0.0
IN10B050 (R)2ACh61.6%0.0
IN10B059 (R)1ACh51.3%0.0
AN08B099_h (R)1ACh51.3%0.0
IN05B001 (R)1GABA41.0%0.0
IN23B024 (R)1ACh41.0%0.0
ANXXX055 (L)1ACh41.0%0.0
DNg24 (L)1GABA41.0%0.0
IN17A109, IN17A120 (R)1ACh30.8%0.0
IN09A017 (R)1GABA30.8%0.0
IN00A007 (M)1GABA30.8%0.0
IN23B006 (R)1ACh30.8%0.0
INXXX027 (L)1ACh20.5%0.0
AN08B101 (R)1ACh20.5%0.0
AN10B022 (R)1ACh20.5%0.0
AN17B008 (L)1GABA20.5%0.0
AN12B004 (R)1GABA20.5%0.0
SNpp022ACh20.5%0.0
IN00A065 (M)1GABA10.3%0.0
SNpp421ACh10.3%0.0
IN09A070 (R)1GABA10.3%0.0
IN13A008 (R)1GABA10.3%0.0
AN08B099_a (R)1ACh10.3%0.0
ANXXX007 (L)1GABA10.3%0.0
AN09B029 (L)1ACh10.3%0.0
AN23B026 (R)1ACh10.3%0.0
AN12B006 (R)1unc10.3%0.0