Male CNS – Cell Type Explorer

SNpp42(R)

20
Total Neurons
Right: 10 | Left: 10
log ratio : 0.00
1,882
Total Synapses
Post: 744 | Pre: 1,138
log ratio : 0.61
188.2
Mean Synapses
Post: 74.4 | Pre: 113.8
log ratio : 0.61
ACh(95.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
VNC-unspecified25233.9%0.9648943.0%
mVAC(T2)(R)17723.8%0.0218015.8%
Ov(R)9512.8%1.0920217.8%
LegNp(T1)(R)10814.5%-0.69675.9%
LegNp(T3)(R)415.5%1.401089.5%
mVAC(T1)(R)324.3%0.67514.5%
mVAC(T3)(R)364.8%-0.42272.4%
LTct30.4%1.4280.7%
WTct(UTct-T2)(R)00.0%inf50.4%
MetaLN(R)00.0%inf10.1%

Connectivity

Inputs

upstream
partner
#NTconns
SNpp42
%
In
CV
AN17B008 (R)3GABA17.927.4%1.4
AN17B008 (L)3GABA6.49.8%1.2
ANXXX109 (R)1GABA5.88.9%0.0
SNpp4210ACh4.67.0%0.6
AN17B007 (R)1GABA3.96.0%0.0
AN12B004 (R)2GABA3.45.2%0.9
IN17B003 (R)1GABA3.24.9%0.0
IN17B008 (R)1GABA3.14.7%0.0
AN12B004 (L)1GABA1.82.8%0.0
IN17B003 (L)1GABA1.72.6%0.0
IN00A004 (M)2GABA1.72.6%0.1
AN17B002 (R)1GABA1.11.7%0.0
AN17B007 (L)1GABA11.5%0.0
IN17B008 (L)1GABA0.91.4%0.0
AN17B002 (L)1GABA0.91.4%0.0
IN00A007 (M)2GABA0.50.8%0.6
SNpp612ACh0.50.8%0.2
IN06B043 (L)1GABA0.40.6%0.0
IN17B006 (R)1GABA0.40.6%0.0
IN00A010 (M)1GABA0.30.5%0.0
IN05B001 (R)1GABA0.30.5%0.0
SNpp182ACh0.30.5%0.3
IN00A012 (M)2GABA0.30.5%0.3
DNd03 (R)1Glu0.20.3%0.0
AN17B011 (R)1GABA0.20.3%0.0
ANXXX041 (R)1GABA0.20.3%0.0
IN12B002 (L)1GABA0.20.3%0.0
IN19A042 (R)1GABA0.20.3%0.0
SNpp261ACh0.20.3%0.0
SNpp061ACh0.20.3%0.0
IN09A019 (R)2GABA0.20.3%0.0
IN19A042 (L)1GABA0.20.3%0.0
SNpp381ACh0.20.3%0.0
IN09A017 (R)1GABA0.20.3%0.0
SNpp531ACh0.10.2%0.0
IN19A086 (R)1GABA0.10.2%0.0
IN05B092 (L)1GABA0.10.2%0.0
DNge138 (M)1unc0.10.2%0.0
SApp23,SNpp561ACh0.10.2%0.0
AN12B001 (L)1GABA0.10.2%0.0
SNpp471ACh0.10.2%0.0
IN09A023 (R)1GABA0.10.2%0.0
AN23B026 (R)1ACh0.10.2%0.0
DNg24 (L)1GABA0.10.2%0.0
IN00A069 (M)1GABA0.10.2%0.0
IN00A028 (M)1GABA0.10.2%0.0
IN00A060 (M)1GABA0.10.2%0.0
IN19A087 (R)1GABA0.10.2%0.0
IN09A019 (L)1GABA0.10.2%0.0
IN17A099 (R)1ACh0.10.2%0.0
IN17B004 (R)1GABA0.10.2%0.0
AN27X004 (L)1HA0.10.2%0.0
DNpe031 (R)1Glu0.10.2%0.0
DNg29 (L)1ACh0.10.2%0.0
SNpp461ACh0.10.2%0.0
AN17B009 (L)1GABA0.10.2%0.0
IN00A049 (M)1GABA0.10.2%0.0
IN12B002 (R)1GABA0.10.2%0.0
IN00A026 (M)1GABA0.10.2%0.0
IN17A109 (R)1ACh0.10.2%0.0
INXXX280 (R)1GABA0.10.2%0.0
AN17B009 (R)1GABA0.10.2%0.0

Outputs

downstream
partner
#NTconns
SNpp42
%
Out
CV
IN09A019 (R)3GABA4015.8%0.4
IN17B003 (R)1GABA24.99.9%0.0
AN12B004 (R)1GABA24.39.6%0.0
IN09A019 (L)3GABA15.16.0%1.1
IN09A018 (R)3GABA12.85.1%0.3
IN09A017 (R)3GABA12.65.0%0.5
IN17B003 (L)1GABA12.24.8%0.0
IN17A099 (R)2ACh8.23.2%0.1
IN05B001 (R)1GABA6.32.5%0.0
IN00A014 (M)3GABA6.22.5%0.8
IN09A029 (R)2GABA5.82.3%0.9
IN09A032 (R)2GABA5.72.3%0.3
IN08B051_e (R)1ACh5.22.1%0.0
IN08B085_a (R)2ACh4.81.9%0.5
SNpp428ACh4.61.8%0.4
IN00A004 (M)2GABA4.21.7%0.0
IN09A023 (R)2GABA4.11.6%0.7
IN08B051_d (R)2ACh3.71.5%0.8
AN12B001 (R)1GABA2.61.0%0.0
IN08B068 (R)2ACh2.61.0%0.1
IN09A070 (R)3GABA2.20.9%0.7
IN17A118 (R)2ACh20.8%0.5
IN17A109 (R)1ACh1.80.7%0.0
AN08B101 (R)3ACh1.60.6%0.5
IN09A022 (R)4GABA1.50.6%1.0
IN06B013 (L)1GABA1.30.5%0.0
AN08B099_h (R)1ACh1.20.5%0.0
IN05B089 (L)2GABA1.10.4%0.6
IN00A010 (M)2GABA1.10.4%0.8
IN00A049 (M)2GABA10.4%0.6
IN19A042 (R)2GABA0.90.4%0.6
SNpp015ACh0.90.4%0.4
AN08B099_c (R)1ACh0.80.3%0.0
IN09A020 (R)2GABA0.80.3%0.0
IN17A034 (R)1ACh0.70.3%0.0
i2 MN (R)1ACh0.70.3%0.0
IN00A007 (M)2GABA0.70.3%0.4
IN05B092 (L)1GABA0.70.3%0.0
IN00A031 (M)5GABA0.70.3%0.3
IN09A024 (R)1GABA0.60.2%0.0
IN00A052 (M)1GABA0.60.2%0.0
IN10B050 (R)3ACh0.60.2%0.4
IN06B078 (R)2GABA0.60.2%0.0
IN17A095 (R)1ACh0.60.2%0.0
IN23B006 (R)2ACh0.60.2%0.7
AN10B053 (R)3ACh0.60.2%0.4
SNpp184ACh0.60.2%0.3
IN12A044 (R)1ACh0.50.2%0.0
IN08B051_c (L)1ACh0.50.2%0.0
AN08B018 (R)2ACh0.50.2%0.6
IN00A025 (M)3GABA0.50.2%0.6
ANXXX027 (L)3ACh0.50.2%0.6
IN08B085_a (L)1ACh0.50.2%0.0
INXXX007 (L)1GABA0.40.2%0.0
IN00A038 (M)1GABA0.40.2%0.0
AN17B002 (R)1GABA0.40.2%0.0
AN23B026 (R)1ACh0.40.2%0.0
IN17B014 (R)1GABA0.40.2%0.0
SNpp062ACh0.40.2%0.0
AN08B020 (L)1ACh0.30.1%0.0
AN08B097 (R)1ACh0.30.1%0.0
IN00A012 (M)1GABA0.30.1%0.0
AN17B008 (R)1GABA0.30.1%0.0
IN19A080 (R)1GABA0.30.1%0.0
IN00A036 (M)2GABA0.30.1%0.3
AN10B034 (R)2ACh0.30.1%0.3
SNpp261ACh0.30.1%0.0
INXXX056 (L)1unc0.30.1%0.0
ANXXX144 (L)1GABA0.30.1%0.0
DNge047 (L)1unc0.30.1%0.0
IN12B069 (R)1GABA0.30.1%0.0
ANXXX109 (R)1GABA0.30.1%0.0
IN17B008 (R)1GABA0.30.1%0.0
SNpp613ACh0.30.1%0.0
IN12B068_b (R)1GABA0.20.1%0.0
IN23B024 (R)1ACh0.20.1%0.0
AN10B020 (L)1ACh0.20.1%0.0
IN17A106_a (R)1ACh0.20.1%0.0
IN17A078 (R)1ACh0.20.1%0.0
IN11A032_e (R)1ACh0.20.1%0.0
AN08B034 (R)1ACh0.20.1%0.0
INXXX280 (L)1GABA0.20.1%0.0
IN12B070 (R)1GABA0.20.1%0.0
IN08B105 (R)1ACh0.20.1%0.0
AN09B016 (R)1ACh0.20.1%0.0
IN05B043 (L)1GABA0.20.1%0.0
IN23B008 (L)1ACh0.20.1%0.0
AN17B016 (R)1GABA0.20.1%0.0
AN08B099_b (R)1ACh0.20.1%0.0
SApp232ACh0.20.1%0.0
AN17B008 (L)1GABA0.20.1%0.0
AN12B004 (L)2GABA0.20.1%0.0
AN08B018 (L)2ACh0.20.1%0.0
SNpp381ACh0.20.1%0.0
IN07B016 (R)1ACh0.20.1%0.0
IN00A063 (M)2GABA0.20.1%0.0
IN00A008 (M)1GABA0.20.1%0.0
IN11A032_d (R)1ACh0.20.1%0.0
IN23B008 (R)1ACh0.20.1%0.0
SNpp031ACh0.10.0%0.0
AN17B007 (R)1GABA0.10.0%0.0
DNd03 (R)1Glu0.10.0%0.0
AN12B001 (L)1GABA0.10.0%0.0
IN17A114 (R)1ACh0.10.0%0.0
IN09A038 (R)1GABA0.10.0%0.0
IN17A087 (R)1ACh0.10.0%0.0
IN12B004 (L)1GABA0.10.0%0.0
IN12B004 (R)1GABA0.10.0%0.0
ANXXX055 (L)1ACh0.10.0%0.0
AN07B018 (R)1ACh0.10.0%0.0
IN10B057 (L)1ACh0.10.0%0.0
IN03B065 (R)1GABA0.10.0%0.0
IN11A030 (R)1ACh0.10.0%0.0
IN06B043 (L)1GABA0.10.0%0.0
IN12B068_b (L)1GABA0.10.0%0.0
IN00A034 (M)1GABA0.10.0%0.0
IN08B051_d (L)1ACh0.10.0%0.0
IN17A027 (R)1ACh0.10.0%0.0
IN12A053_c (R)1ACh0.10.0%0.0
IN08B051_a (R)1ACh0.10.0%0.0
IN00A061 (M)1GABA0.10.0%0.0
IN00A026 (M)1GABA0.10.0%0.0
DNg29 (R)1ACh0.10.0%0.0
AN17B013 (R)1GABA0.10.0%0.0
AN10B047 (R)1ACh0.10.0%0.0
AN10B039 (R)1ACh0.10.0%0.0
AN12B006 (L)1unc0.10.0%0.0
AN01A033 (R)1ACh0.10.0%0.0
AN09B027 (L)1ACh0.10.0%0.0
ANXXX098 (L)1ACh0.10.0%0.0
DNpe031 (R)1Glu0.10.0%0.0
DNc01 (L)1unc0.10.0%0.0
DNg29 (L)1ACh0.10.0%0.0
SNpp29,SNpp631ACh0.10.0%0.0
AN09B015 (R)1ACh0.10.0%0.0
AN12B006 (R)1unc0.10.0%0.0
SNpp461ACh0.10.0%0.0
IN10B052 (R)1ACh0.10.0%0.0
IN01B007 (R)1GABA0.10.0%0.0
IN00A003 (M)1GABA0.10.0%0.0
DNg30 (L)15-HT0.10.0%0.0
IN17A109, IN17A120 (R)1ACh0.10.0%0.0
SNpp021ACh0.10.0%0.0
IN05B010 (L)1GABA0.10.0%0.0
AN09B029 (L)1ACh0.10.0%0.0
SNpp551ACh0.10.0%0.0
AN17B009 (R)1GABA0.10.0%0.0
IN00A045 (M)1GABA0.10.0%0.0
IN19A056 (R)1GABA0.10.0%0.0
IN17B004 (R)1GABA0.10.0%0.0