Male CNS – Cell Type Explorer

SNpp35(L)

6
Total Neurons
Right: 3 | Left: 3
log ratio : 0.00
1,231
Total Synapses
Post: 267 | Pre: 964
log ratio : 1.85
410.3
Mean Synapses
Post: 89 | Pre: 321.3
log ratio : 1.85
ACh(96.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)4918.4%2.7733434.6%
HTct(UTct-T3)(L)8230.7%1.5724425.3%
NTct(UTct-T1)(L)5821.7%1.2513814.3%
IntTct4115.4%1.8014314.8%
VNC-unspecified51.9%3.77687.1%
DMetaN(L)2910.9%-2.2760.6%
LegNp(T3)(L)31.1%3.37313.2%

Connectivity

Inputs

upstream
partner
#NTconns
SNpp35
%
In
CV
IN06B017 (R)4GABA64.381.1%0.7
SNpp353ACh4.35.5%0.8
IN06B050 (R)1GABA1.31.7%0.0
IN06B052 (R)1GABA11.3%0.0
IN07B079 (R)2ACh11.3%0.3
AN02A005 (L)1Glu0.70.8%0.0
IN03B055 (L)2GABA0.70.8%0.0
SApp012ACh0.70.8%0.0
IN19B081 (R)1ACh0.30.4%0.0
IN11B012 (L)1GABA0.30.4%0.0
IN16B048 (L)1Glu0.30.4%0.0
IN17A072 (L)1ACh0.30.4%0.0
IN27X007 (L)1unc0.30.4%0.0
AN09A005 (L)1unc0.30.4%0.0
IN06B076 (R)1GABA0.30.4%0.0
SNpp141ACh0.30.4%0.0
IN19B002 (L)1ACh0.30.4%0.0
IN06B014 (R)1GABA0.30.4%0.0
SApp081ACh0.30.4%0.0
SNpp241ACh0.30.4%0.0
SNxx251ACh0.30.4%0.0
IN06B082 (R)1GABA0.30.4%0.0
IN03B057 (L)1GABA0.30.4%0.0
DNge152 (M)1unc0.30.4%0.0

Outputs

downstream
partner
#NTconns
SNpp35
%
Out
CV
IN17B004 (L)2GABA508.7%0.9
IN06A003 (L)2GABA366.3%0.2
IN03B089 (L)9GABA274.7%0.5
IN03B079 (L)4GABA244.2%0.3
IN17B001 (L)1GABA234.0%0.0
IN17B015 (L)1GABA18.33.2%0.0
IN03B063 (L)3GABA173.0%0.5
IN12B016 (L)1GABA16.32.9%0.0
IN16B059 (L)2Glu15.72.7%0.2
IN07B079 (R)5ACh152.6%0.6
IN19B056 (L)2ACh14.72.6%0.0
IN05B001 (L)1GABA13.32.3%0.0
IN19B023 (L)1ACh13.32.3%0.0
IN03B064 (L)4GABA13.32.3%0.4
IN07B027 (R)2ACh122.1%0.2
IN03B086_b (L)1GABA11.72.0%0.0
IN19B002 (L)1ACh11.32.0%0.0
IN16B048 (L)1Glu111.9%0.0
IN19B070 (L)1ACh9.71.7%0.0
IN03B075 (L)2GABA91.6%0.3
IN03B077 (L)3GABA8.71.5%1.1
IN03B086_e (L)2GABA8.31.5%0.0
AN08B079_a (L)4ACh81.4%0.4
IN19B066 (R)2ACh71.2%0.3
IN07B030 (L)1Glu6.31.1%0.0
IN19B023 (R)1ACh61.0%0.0
IN03B086_e (R)1GABA50.9%0.0
IN19B034 (L)1ACh50.9%0.0
IN03B086_b (R)1GABA50.9%0.0
IN03B072 (L)4GABA50.9%0.6
IN07B047 (L)1ACh4.70.8%0.0
IN07B090 (L)1ACh4.30.8%0.0
SNpp353ACh4.30.8%0.1
IN16B066 (L)1Glu3.70.6%0.0
IN17A067 (L)1ACh3.70.6%0.0
IN03B085 (L)1GABA3.70.6%0.0
IN16B047 (L)1Glu3.70.6%0.0
AN17B002 (L)1GABA3.30.6%0.0
IN03B052 (L)2GABA3.30.6%0.6
hi2 MN (L)2unc3.30.6%0.6
IN05B001 (R)1GABA3.30.6%0.0
IN18B028 (L)1ACh30.5%0.0
IN12B002 (R)2GABA30.5%0.6
IN03B083 (L)3GABA30.5%0.7
IN19B002 (R)1ACh2.70.5%0.0
AN27X004 (L)1HA2.70.5%0.0
IN19B013 (L)2ACh2.70.5%0.2
IN03B078 (L)2GABA2.70.5%0.8
IN07B094_c (L)1ACh2.70.5%0.0
IN03B090 (R)1GABA2.70.5%0.0
IN19B034 (R)1ACh2.70.5%0.0
IN03B056 (L)2GABA2.70.5%0.0
IN03B067 (L)2GABA2.70.5%0.5
IN11B019 (L)1GABA20.3%0.0
IN06B050 (R)2GABA20.3%0.7
IN03B089 (R)1GABA1.70.3%0.0
IN16B087 (L)1Glu1.70.3%0.0
IN12B002 (L)1GABA1.70.3%0.0
IN07B083_b (L)2ACh1.70.3%0.2
AN08B079_b (L)1ACh1.70.3%0.0
IN03B090 (L)1GABA1.70.3%0.0
INXXX133 (L)1ACh1.30.2%0.0
IN19B069 (R)1ACh1.30.2%0.0
dMS10 (L)1ACh1.30.2%0.0
AN07B021 (L)1ACh1.30.2%0.0
IN07B067 (R)2ACh1.30.2%0.5
IN06A100 (L)2GABA1.30.2%0.5
IN07B092_b (L)1ACh1.30.2%0.0
IN07B073_a (R)1ACh1.30.2%0.0
IN07B031 (L)1Glu1.30.2%0.0
IN12A018 (L)2ACh1.30.2%0.0
IN06B017 (R)2GABA1.30.2%0.5
AN19B019 (R)1ACh1.30.2%0.0
IN11B012 (L)1GABA10.2%0.0
IN06A072 (L)1GABA10.2%0.0
MNxm03 (L)1unc10.2%0.0
MNhl59 (L)1unc10.2%0.0
INXXX201 (R)1ACh10.2%0.0
AN19B046 (L)1ACh10.2%0.0
IN01A042 (L)1ACh10.2%0.0
MNwm36 (L)1unc10.2%0.0
IN03B061 (L)1GABA10.2%0.0
IN06A020 (L)1GABA10.2%0.0
IN19A026 (L)1GABA10.2%0.0
IN17A060 (L)1Glu10.2%0.0
SNpp242ACh10.2%0.3
IN07B038 (L)2ACh10.2%0.3
IN17B001 (R)1GABA10.2%0.0
IN03B038 (L)1GABA10.2%0.0
IN02A049 (L)2Glu10.2%0.3
IN12A042 (R)1ACh0.70.1%0.0
dMS10 (R)1ACh0.70.1%0.0
IN06A052 (L)1GABA0.70.1%0.0
IN06A120_c (L)1GABA0.70.1%0.0
IN06A120_a (L)1GABA0.70.1%0.0
IN11B017_b (L)1GABA0.70.1%0.0
IN02A063 (L)1Glu0.70.1%0.0
IN07B094_a (L)1ACh0.70.1%0.0
MNhm43 (L)1unc0.70.1%0.0
IN27X014 (R)1GABA0.70.1%0.0
IN06B014 (R)1GABA0.70.1%0.0
i2 MN (L)1ACh0.70.1%0.0
INXXX119 (R)1GABA0.70.1%0.0
IN02A058 (L)1Glu0.70.1%0.0
IN06A120_b (L)1GABA0.70.1%0.0
IN07B073_a (L)1ACh0.70.1%0.0
IN13A013 (L)1GABA0.70.1%0.0
IN03B055 (L)2GABA0.70.1%0.0
IN03B057 (L)1GABA0.70.1%0.0
IN06B052 (R)2GABA0.70.1%0.0
IN16B089 (L)2Glu0.70.1%0.0
IN19B087 (R)1ACh0.30.1%0.0
IN03B065 (L)1GABA0.30.1%0.0
MNhl88 (L)1unc0.30.1%0.0
b1 MN (R)1unc0.30.1%0.0
IN17A011 (L)1ACh0.30.1%0.0
AN27X004 (R)1HA0.30.1%0.0
SApp06,SApp151ACh0.30.1%0.0
AN19B059 (L)1ACh0.30.1%0.0
AN19B076 (L)1ACh0.30.1%0.0
SApp201ACh0.30.1%0.0
AN17B008 (R)1GABA0.30.1%0.0
IN16B100_a (L)1Glu0.30.1%0.0
IN06A105 (L)1GABA0.30.1%0.0
IN19B067 (L)1ACh0.30.1%0.0
IN03B088 (L)1GABA0.30.1%0.0
IN06A101 (L)1GABA0.30.1%0.0
IN12A059_e (L)1ACh0.30.1%0.0
IN07B019 (L)1ACh0.30.1%0.0
INXXX315 (L)1ACh0.30.1%0.0
MNhm42 (L)1unc0.30.1%0.0
IN02A008 (R)1Glu0.30.1%0.0
IN03B080 (L)1GABA0.30.1%0.0
IN06A129 (L)1GABA0.30.1%0.0
IN06A076_a (L)1GABA0.30.1%0.0
IN08B051_d (L)1ACh0.30.1%0.0
AN27X011 (R)1ACh0.30.1%0.0
AN19B046 (R)1ACh0.30.1%0.0
IN03B076 (L)1GABA0.30.1%0.0
IN07B039 (L)1ACh0.30.1%0.0
IN06A076_b (L)1GABA0.30.1%0.0
IN11B001 (L)1ACh0.30.1%0.0
ps1 MN (L)1unc0.30.1%0.0
AN06B045 (R)1GABA0.30.1%0.0
AN16B078_c (L)1Glu0.30.1%0.0
AN10B008 (L)1ACh0.30.1%0.0