Male CNS – Cell Type Explorer

SNpp08(L)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,095
Total Synapses
Post: 277 | Pre: 818
log ratio : 1.56
547.5
Mean Synapses
Post: 138.5 | Pre: 409
log ratio : 1.56
ACh(96.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)17563.2%1.6354366.4%
HTct(UTct-T3)(L)5018.1%1.5014117.2%
IntTct4215.2%1.3410613.0%
NTct(UTct-T1)(L)20.7%3.70263.2%
ADMN(L)82.9%-2.0020.2%
VNC-unspecified00.0%0.0000.0%

Connectivity

Inputs

upstream
partner
#NTconns
SNpp08
%
In
CV
IN06B076 (R)3GABA40.530.8%1.1
IN03B043 (L)1GABA21.516.3%0.0
AN07B025 (R)1ACh1712.9%0.0
IN06B081 (R)2GABA139.9%0.0
IN06B017 (R)2GABA86.1%0.4
IN02A007 (L)1Glu3.52.7%0.0
SNpp082ACh32.3%0.0
IN06A136 (R)2GABA32.3%0.0
IN06B064 (R)1GABA21.5%0.0
IN17B015 (L)1GABA21.5%0.0
IN19A043 (L)1GABA1.51.1%0.0
SNpp331ACh1.51.1%0.0
EAXXX079 (R)1unc1.51.1%0.0
ANXXX171 (L)1ACh1.51.1%0.0
SApp103ACh1.51.1%0.0
IN11B020 (L)1GABA10.8%0.0
IN19A056 (L)1GABA10.8%0.0
IN03B066 (L)2GABA10.8%0.0
IN16B079 (L)1Glu0.50.4%0.0
IN06A052 (R)1GABA0.50.4%0.0
IN12A043_a (L)1ACh0.50.4%0.0
AN27X008 (L)1HA0.50.4%0.0
IN19B045, IN19B052 (R)1ACh0.50.4%0.0
IN17B004 (L)1GABA0.50.4%0.0
IN19A057 (L)1GABA0.50.4%0.0
IN07B098 (L)1ACh0.50.4%0.0
IN03B080 (L)1GABA0.50.4%0.0
IN06A072 (R)1GABA0.50.4%0.0
SNpp041ACh0.50.4%0.0
SApp131ACh0.50.4%0.0
SApp041ACh0.50.4%0.0
SApp19,SApp211ACh0.50.4%0.0
DNge097 (R)1Glu0.50.4%0.0

Outputs

downstream
partner
#NTconns
SNpp08
%
Out
CV
IN03B080 (L)4GABA72.57.8%0.3
vMS13 (L)1GABA626.7%0.0
MNwm36 (L)1unc40.54.4%0.0
IN17A048 (L)1ACh343.7%0.0
IN02A008 (R)1Glu32.53.5%0.0
IN17A059,IN17A063 (L)2ACh313.4%0.1
IN02A008 (L)1Glu30.53.3%0.0
ps1 MN (L)1unc30.53.3%0.0
IN06B050 (R)2GABA28.53.1%0.1
IN17A064 (L)2ACh283.0%0.8
IN12A035 (L)3ACh272.9%0.6
IN06A038 (L)1Glu202.2%0.0
IN17A057 (L)1ACh19.52.1%0.0
IN00A056 (M)4GABA192.1%0.5
IN08B093 (L)3ACh192.1%0.6
AN07B025 (R)1ACh18.52.0%0.0
IN17A093 (L)2ACh151.6%0.1
IN06B077 (R)3GABA151.6%0.3
IN03B077 (L)2GABA141.5%0.4
IN03B076 (L)1GABA13.51.5%0.0
AN19B098 (L)2ACh11.51.2%0.0
IN06B052 (R)2GABA10.51.1%0.5
IN07B094_b (L)3ACh101.1%0.8
MNhl88 (L)1unc9.51.0%0.0
MNnm13 (L)1unc91.0%0.0
IN00A057 (M)5GABA80.9%0.5
AN07B025 (L)1ACh7.50.8%0.0
IN27X014 (R)1GABA7.50.8%0.0
IN06B058 (R)3GABA7.50.8%0.7
IN06B078 (L)1GABA70.8%0.0
IN03B043 (L)1GABA70.8%0.0
IN11B013 (L)2GABA70.8%0.0
IN17B015 (L)1GABA6.50.7%0.0
IN27X014 (L)1GABA6.50.7%0.0
MNnm08 (L)1unc6.50.7%0.0
IN19B071 (L)3ACh6.50.7%0.6
AN07B043 (L)1ACh5.50.6%0.0
AN19B076 (L)2ACh5.50.6%0.8
IN06A021 (L)1GABA50.5%0.0
AN19B059 (L)2ACh50.5%0.8
IN19B075 (L)2ACh50.5%0.4
IN06B013 (R)1GABA4.50.5%0.0
AN07B056 (L)1ACh4.50.5%0.0
IN07B047 (L)1ACh40.4%0.0
IN06B013 (L)1GABA40.4%0.0
IN06B047 (R)2GABA40.4%0.5
IN06B055 (R)1GABA40.4%0.0
IN19A056 (L)1GABA40.4%0.0
IN19B057 (L)2ACh40.4%0.8
IN02A042 (L)1Glu3.50.4%0.0
MNwm36 (R)1unc3.50.4%0.0
IN12A006 (L)1ACh3.50.4%0.0
AN10B017 (L)1ACh3.50.4%0.0
IN11B019 (L)2GABA3.50.4%0.7
AN17B013 (L)2GABA3.50.4%0.1
IN19B090 (R)2ACh3.50.4%0.4
IN07B094_c (L)1ACh30.3%0.0
IN07B026 (L)1ACh30.3%0.0
IN19B020 (L)1ACh30.3%0.0
IN06B066 (R)2GABA30.3%0.7
IN06B038 (R)1GABA30.3%0.0
IN02A058 (L)2Glu30.3%0.7
SNpp082ACh30.3%0.0
IN08B088 (L)1ACh2.50.3%0.0
IN19B086 (L)1ACh2.50.3%0.0
IN19A043 (L)1GABA2.50.3%0.0
IN17B004 (L)1GABA2.50.3%0.0
IN16B087 (L)1Glu2.50.3%0.0
IN07B038 (L)1ACh2.50.3%0.0
MNhl87 (L)1unc2.50.3%0.0
AN03B050 (L)1GABA2.50.3%0.0
AN19B060 (L)2ACh2.50.3%0.2
IN07B096_b (L)2ACh2.50.3%0.2
IN06B076 (R)1GABA20.2%0.0
IN16B062 (L)1Glu20.2%0.0
AN06B031 (R)1GABA20.2%0.0
IN06B040 (R)1GABA20.2%0.0
DNge097 (R)1Glu20.2%0.0
IN03B081 (L)1GABA20.2%0.0
IN12A043_a (L)1ACh20.2%0.0
IN19B023 (L)1ACh20.2%0.0
IN03B086_e (L)1GABA20.2%0.0
AN19B079 (L)1ACh20.2%0.0
IN07B096_a (L)2ACh20.2%0.5
IN02A019 (L)1Glu20.2%0.0
IN19B023 (R)1ACh20.2%0.0
AN10B008 (L)1ACh20.2%0.0
AN27X004 (R)1HA1.50.2%0.0
AN07B041 (L)1ACh1.50.2%0.0
AN07B021 (L)1ACh1.50.2%0.0
AN02A001 (R)1Glu1.50.2%0.0
i2 MN (L)1ACh1.50.2%0.0
IN02A013 (L)1Glu1.50.2%0.0
IN03B086_e (R)1GABA1.50.2%0.0
IN02A037 (L)1Glu1.50.2%0.0
MNwm35 (L)1unc1.50.2%0.0
IN17A023 (L)1ACh10.1%0.0
DVMn 3a, b (L)1unc10.1%0.0
IN17A067 (L)1ACh10.1%0.0
ps2 MN (L)1unc10.1%0.0
IN06B033 (L)1GABA10.1%0.0
IN12B014 (L)1GABA10.1%0.0
AN16B078_d (L)1Glu10.1%0.0
AN27X009 (R)1ACh10.1%0.0
IN19B081 (R)1ACh10.1%0.0
IN03B086_c (R)1GABA10.1%0.0
IN07B096_c (L)1ACh10.1%0.0
IN07B094_a (L)1ACh10.1%0.0
IN12A046_b (L)1ACh10.1%0.0
IN03B081 (R)1GABA10.1%0.0
IN07B090 (L)1ACh10.1%0.0
IN03B072 (L)1GABA10.1%0.0
IN12A061_d (L)1ACh10.1%0.0
tp2 MN (L)1unc10.1%0.0
tpn MN (L)1unc10.1%0.0
IN02A007 (L)1Glu10.1%0.0
hg4 MN (L)1unc10.1%0.0
IN13A013 (L)1GABA10.1%0.0
AN19B063 (L)1ACh10.1%0.0
IN17A088, IN17A089 (L)2ACh10.1%0.0
IN19A057 (L)1GABA10.1%0.0
IN03B084 (L)2GABA10.1%0.0
IN16B106 (L)2Glu10.1%0.0
IN11B014 (L)2GABA10.1%0.0
IN27X007 (L)1unc10.1%0.0
IN12B002 (R)2GABA10.1%0.0
IN06A032 (L)1GABA0.50.1%0.0
IN03B069 (L)1GABA0.50.1%0.0
IN16B092 (L)1Glu0.50.1%0.0
IN11B021_e (L)1GABA0.50.1%0.0
IN16B071 (L)1Glu0.50.1%0.0
IN17A078 (L)1ACh0.50.1%0.0
SNpp111ACh0.50.1%0.0
IN06A079 (L)1GABA0.50.1%0.0
IN17A056 (L)1ACh0.50.1%0.0
IN00A047 (M)1GABA0.50.1%0.0
IN19B053 (R)1ACh0.50.1%0.0
IN03B049 (L)1GABA0.50.1%0.0
IN19B045 (L)1ACh0.50.1%0.0
SNpp041ACh0.50.1%0.0
INXXX142 (R)1ACh0.50.1%0.0
IN12A001 (L)1ACh0.50.1%0.0
EAXXX079 (R)1unc0.50.1%0.0
EA00B006 (M)1unc0.50.1%0.0
AN06A062 (L)1GABA0.50.1%0.0
AN19B093 (L)1ACh0.50.1%0.0
SApp101ACh0.50.1%0.0
IN06B081 (R)1GABA0.50.1%0.0
IN11A018 (L)1ACh0.50.1%0.0
IN05B016 (R)1GABA0.50.1%0.0
IN16B107 (L)1Glu0.50.1%0.0
IN16B089 (L)1Glu0.50.1%0.0
IN07B096_d (R)1ACh0.50.1%0.0
IN06A108 (L)1GABA0.50.1%0.0
IN19A049 (L)1GABA0.50.1%0.0
IN03B067 (L)1GABA0.50.1%0.0
IN16B111 (L)1Glu0.50.1%0.0
IN03B075 (L)1GABA0.50.1%0.0
IN03B058 (L)1GABA0.50.1%0.0
IN19B073 (R)1ACh0.50.1%0.0
IN07B090 (R)1ACh0.50.1%0.0
IN16B079 (L)1Glu0.50.1%0.0
IN06A071 (L)1GABA0.50.1%0.0
IN07B083_d (L)1ACh0.50.1%0.0
IN12A050_a (L)1ACh0.50.1%0.0
hi2 MN (L)1unc0.50.1%0.0
IN06B055 (L)1GABA0.50.1%0.0
IN19B053 (L)1ACh0.50.1%0.0
IN06B042 (R)1GABA0.50.1%0.0
IN06B069 (R)1GABA0.50.1%0.0
tp1 MN (L)1unc0.50.1%0.0
b3 MN (L)1unc0.50.1%0.0
IN12A007 (L)1ACh0.50.1%0.0
IN17A011 (L)1ACh0.50.1%0.0
AN19B046 (L)1ACh0.50.1%0.0
SApp19,SApp211ACh0.50.1%0.0
AN17B016 (L)1GABA0.50.1%0.0