Male CNS – Cell Type Explorer

SMP537(R)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
3,306
Total Synapses
Post: 2,349 | Pre: 957
log ratio : -1.30
1,653
Mean Synapses
Post: 1,174.5 | Pre: 478.5
log ratio : -1.30
Glu(81.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(R)1,57166.9%-1.3263065.8%
SMP(L)44218.8%-0.4632133.5%
SLP(R)29012.3%-6.5930.3%
CentralBrain-unspecified311.3%-3.3730.3%
SCL(R)150.6%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SMP537
%
In
CV
SMP222 (R)2Glu61.55.6%0.1
SMP223 (R)3Glu534.8%0.1
SMP373 (R)1ACh52.54.8%0.0
SMP518 (L)2ACh44.54.1%0.1
SMP222 (L)2Glu333.0%0.2
CB4077 (R)5ACh32.53.0%0.6
SMP223 (L)3Glu29.52.7%0.5
SMP228 (L)5Glu292.6%0.5
SMP335 (R)1Glu282.6%0.0
SMP297 (R)4GABA27.52.5%0.5
SMP218 (R)3Glu262.4%1.0
SMP523 (L)3ACh25.52.3%1.0
CB4077 (L)3ACh24.52.2%0.5
AN05B101 (L)1GABA232.1%0.0
SMP373 (L)1ACh22.52.1%0.0
SMP228 (R)4Glu22.52.1%0.6
LHPV6h1 (R)3ACh211.9%0.3
SMP202 (R)1ACh201.8%0.0
SMP517 (L)2ACh201.8%0.1
SMP518 (R)2ACh201.8%0.2
CB2648 (R)1Glu19.51.8%0.0
SMP517 (R)2ACh17.51.6%0.4
CB3508 (R)1Glu15.51.4%0.0
AN05B101 (R)1GABA15.51.4%0.0
LPN_a (R)2ACh141.3%0.8
CB1984 (R)1Glu131.2%0.0
CB3508 (L)1Glu121.1%0.0
AVLP594 (R)1unc11.51.0%0.0
SLP064 (R)1Glu11.51.0%0.0
SMP220 (R)5Glu10.51.0%0.8
CB3566 (R)1Glu100.9%0.0
AVLP594 (L)1unc100.9%0.0
SMP218 (L)2Glu90.8%0.6
SMP297 (L)3GABA90.8%0.5
SMP221 (R)2Glu8.50.8%0.8
SLP304 (R)1unc8.50.8%0.0
SLP322 (R)3ACh7.50.7%1.1
SMP221 (L)2Glu7.50.7%0.3
SMP229 (R)3Glu7.50.7%0.3
SMP219 (R)4Glu7.50.7%0.5
SLP265 (R)1Glu70.6%0.0
PRW038 (R)1ACh70.6%0.0
LHPV6f5 (R)2ACh70.6%0.7
SMP582 (R)1ACh70.6%0.0
CB2539 (R)2GABA6.50.6%0.7
SMP252 (R)1ACh60.5%0.0
SMP338 (R)2Glu60.5%0.2
SMP220 (L)5Glu60.5%0.5
SLP001 (R)1Glu5.50.5%0.0
SMP215 (R)1Glu5.50.5%0.0
SMP523 (R)1ACh5.50.5%0.0
CB4091 (L)2Glu5.50.5%0.5
CB1057 (R)1Glu5.50.5%0.0
CB3252 (R)3Glu5.50.5%0.3
SMP169 (R)1ACh50.5%0.0
SMP252 (L)1ACh50.5%0.0
SMP217 (R)1Glu50.5%0.0
SMP227 (R)2Glu50.5%0.8
PRW025 (R)2ACh50.5%0.8
LPN_a (L)2ACh4.50.4%0.3
SMP582 (L)1ACh4.50.4%0.0
CB2003 (R)2Glu40.4%0.2
DNpe035 (R)1ACh40.4%0.0
DNpe033 (R)1GABA40.4%0.0
SMP519 (L)2ACh40.4%0.2
CB0993 (R)2Glu40.4%0.2
DNpe048 (R)1unc3.50.3%0.0
SMP519 (R)2ACh3.50.3%0.1
SMP082 (R)2Glu3.50.3%0.1
DN1pB (R)2Glu3.50.3%0.1
GNG324 (R)1ACh30.3%0.0
SMP738 (R)2unc30.3%0.3
SMP285 (R)1GABA30.3%0.0
PRW008 (L)3ACh30.3%0.4
CB4091 (R)3Glu30.3%0.4
VP1l+_lvPN (R)2ACh30.3%0.3
CB0386 (R)1Glu2.50.2%0.0
SMP346 (R)2Glu2.50.2%0.2
aMe9 (R)1ACh2.50.2%0.0
PRW066 (R)1ACh2.50.2%0.0
SMP219 (L)2Glu2.50.2%0.6
PRW008 (R)1ACh2.50.2%0.0
aMe9 (L)2ACh2.50.2%0.6
SMP741 (R)3unc2.50.2%0.3
SMP335 (L)1Glu20.2%0.0
CB3118 (R)1Glu20.2%0.0
GNG630 (L)1unc20.2%0.0
SLP059 (R)1GABA20.2%0.0
SMP076 (R)1GABA1.50.1%0.0
LHPD5b1 (R)1ACh1.50.1%0.0
SMP217 (L)1Glu1.50.1%0.0
CB1026 (R)1unc1.50.1%0.0
CB2636 (L)1ACh1.50.1%0.0
PS108 (R)1Glu1.50.1%0.0
CB1011 (R)1Glu1.50.1%0.0
SMP082 (L)1Glu1.50.1%0.0
CB1026 (L)1unc1.50.1%0.0
DNp25 (R)1GABA1.50.1%0.0
SMP304 (R)1GABA1.50.1%0.0
SLP463 (L)1unc1.50.1%0.0
CB2636 (R)1ACh10.1%0.0
SLP463 (R)1unc10.1%0.0
SMP525 (R)1ACh10.1%0.0
SMP348 (L)1ACh10.1%0.0
PRW037 (R)1ACh10.1%0.0
PRW060 (R)1Glu10.1%0.0
VP5+Z_adPN (R)1ACh10.1%0.0
SMP227 (L)1Glu10.1%0.0
PRW058 (R)1GABA10.1%0.0
DNpe053 (L)1ACh10.1%0.0
SMP232 (R)2Glu10.1%0.0
SLP266 (R)2Glu10.1%0.0
SMP538 (L)1Glu10.1%0.0
SLP368 (L)1ACh10.1%0.0
SMP261 (R)2ACh10.1%0.0
SMP302 (L)1GABA0.50.0%0.0
PRW056 (L)1GABA0.50.0%0.0
SMP509 (L)1ACh0.50.0%0.0
DN1pA (L)1Glu0.50.0%0.0
SMP599 (L)1Glu0.50.0%0.0
SMP738 (L)1unc0.50.0%0.0
CB2280 (R)1Glu0.50.0%0.0
SCL002m (R)1ACh0.50.0%0.0
SMP529 (R)1ACh0.50.0%0.0
SMP400 (R)1ACh0.50.0%0.0
SMP302 (R)1GABA0.50.0%0.0
SMP530_a (R)1Glu0.50.0%0.0
DNpe053 (R)1ACh0.50.0%0.0
5-HTPMPD01 (R)15-HT0.50.0%0.0
LPN_b (R)1ACh0.50.0%0.0
DSKMP3 (R)1unc0.50.0%0.0
SMP545 (R)1GABA0.50.0%0.0
PRW058 (L)1GABA0.50.0%0.0
CB1379 (L)1ACh0.50.0%0.0
SMP350 (L)1ACh0.50.0%0.0
aDT4 (L)15-HT0.50.0%0.0
SMP350 (R)1ACh0.50.0%0.0
KCa'b'-m (R)1DA0.50.0%0.0
SMP509 (R)1ACh0.50.0%0.0
CB0943 (R)1ACh0.50.0%0.0
CB3357 (R)1ACh0.50.0%0.0
CB1008 (L)1ACh0.50.0%0.0
SMP538 (R)1Glu0.50.0%0.0
SMP537 (R)1Glu0.50.0%0.0
PRW009 (R)1ACh0.50.0%0.0
CB1537 (L)1ACh0.50.0%0.0
SMP530_b (L)1Glu0.50.0%0.0
SMP532_a (R)1Glu0.50.0%0.0
SMP317 (R)1ACh0.50.0%0.0
SMP539 (R)1Glu0.50.0%0.0
SMP532_b (R)1Glu0.50.0%0.0
SMP514 (L)1ACh0.50.0%0.0
SMP741 (L)1unc0.50.0%0.0
GNG550 (R)15-HT0.50.0%0.0
SLP411 (L)1Glu0.50.0%0.0
PAL01 (R)1unc0.50.0%0.0
SMP285 (L)1GABA0.50.0%0.0
SLP270 (L)1ACh0.50.0%0.0
oviIN (R)1GABA0.50.0%0.0

Outputs

downstream
partner
#NTconns
SMP537
%
Out
CV
SMP285 (R)1GABA12011.7%0.0
SMP302 (R)3GABA93.59.1%0.2
CB4077 (R)4ACh848.2%0.5
CB4077 (L)5ACh65.56.4%0.9
SMP285 (L)1GABA62.56.1%0.0
SMP302 (L)2GABA605.8%0.4
SMP545 (R)1GABA55.55.4%0.0
DNd01 (L)2Glu414.0%0.2
DNd01 (R)2Glu343.3%0.4
SMP162 (L)3Glu32.53.2%1.0
SMP162 (R)2Glu292.8%0.4
SMP545 (L)1GABA282.7%0.0
CB4125 (R)1unc212.0%0.0
SMP261 (R)5ACh17.51.7%0.7
DNpe033 (L)1GABA15.51.5%0.0
DNpe033 (R)1GABA151.5%0.0
SMP219 (R)4Glu151.5%0.7
DNp25 (R)1GABA141.4%0.0
SMP219 (L)3Glu12.51.2%0.6
SMP531 (R)1Glu101.0%0.0
SMP582 (R)1ACh90.9%0.0
CB4128 (L)3unc8.50.8%0.7
SMP350 (L)3ACh7.50.7%0.3
CB4128 (R)3unc6.50.6%0.9
SMP348 (R)2ACh60.6%0.2
SMP297 (L)3GABA5.50.5%0.7
SMP286 (R)1GABA50.5%0.0
SMP168 (R)1ACh50.5%0.0
SMP350 (R)2ACh50.5%0.6
SMP220 (L)5Glu50.5%0.3
SMP306 (R)1GABA4.50.4%0.0
SMP531 (L)1Glu4.50.4%0.0
SMP223 (R)3Glu4.50.4%0.7
SMP222 (R)2Glu4.50.4%0.3
SMP539 (R)2Glu4.50.4%0.3
SMP726m (R)1ACh40.4%0.0
SMP306 (L)1GABA40.4%0.0
SMP700m (L)2ACh3.50.3%0.1
SMP297 (R)2GABA3.50.3%0.1
SMP220 (R)3Glu3.50.3%0.5
SMP227 (R)2Glu30.3%0.3
CB4091 (R)3Glu30.3%0.4
SMP082 (L)2Glu30.3%0.3
DN1pB (R)1Glu2.50.2%0.0
SMP348 (L)1ACh2.50.2%0.0
SMP083 (L)2Glu2.50.2%0.2
SMP228 (R)3Glu2.50.2%0.6
CB4091 (L)2Glu2.50.2%0.6
LNd_b (R)2ACh2.50.2%0.2
SLP304 (R)1unc2.50.2%0.0
SMP218 (R)3Glu2.50.2%0.3
DNp48 (L)1ACh20.2%0.0
PRW073 (R)1Glu20.2%0.0
SMP517 (L)2ACh20.2%0.5
SMP082 (R)1Glu20.2%0.0
SMP598 (L)1Glu20.2%0.0
SMP700m (R)2ACh20.2%0.5
SMP539 (L)1Glu20.2%0.0
PRW037 (R)2ACh20.2%0.5
PRW008 (L)2ACh20.2%0.5
SMP286 (L)1GABA1.50.1%0.0
CB3508 (L)1Glu1.50.1%0.0
FB6K (R)1Glu1.50.1%0.0
CB0993 (R)1Glu1.50.1%0.0
SMP538 (L)1Glu1.50.1%0.0
SMP582 (L)1ACh1.50.1%0.0
SMP223 (L)2Glu1.50.1%0.3
SMP598 (R)1Glu1.50.1%0.0
SMP261 (L)2ACh1.50.1%0.3
SLP463 (R)1unc10.1%0.0
SMP525 (R)1ACh10.1%0.0
SMP228 (L)1Glu10.1%0.0
SMP221 (R)1Glu10.1%0.0
SMP227 (L)1Glu10.1%0.0
DNp25 (L)1GABA10.1%0.0
LPN_a (L)1ACh10.1%0.0
SMP221 (L)1Glu10.1%0.0
SMP373 (L)1ACh10.1%0.0
SMP086 (R)2Glu10.1%0.0
SMP338 (R)1Glu10.1%0.0
SMP523 (R)2ACh10.1%0.0
SMP335 (R)1Glu10.1%0.0
IPC (L)2unc10.1%0.0
SMP741 (R)2unc10.1%0.0
SMP347 (L)1ACh0.50.0%0.0
SMP540 (R)1Glu0.50.0%0.0
SMP537 (R)1Glu0.50.0%0.0
CB2539 (R)1GABA0.50.0%0.0
SMP049 (R)1GABA0.50.0%0.0
SMP120 (L)1Glu0.50.0%0.0
CB0943 (R)1ACh0.50.0%0.0
PRW034 (L)1ACh0.50.0%0.0
CB1406 (R)1Glu0.50.0%0.0
CB1895 (R)1ACh0.50.0%0.0
SMP347 (R)1ACh0.50.0%0.0
SMP218 (L)1Glu0.50.0%0.0
CB3357 (R)1ACh0.50.0%0.0
SMP518 (R)1ACh0.50.0%0.0
SMP299 (L)1GABA0.50.0%0.0
CB3508 (R)1Glu0.50.0%0.0
DN1pA (R)1Glu0.50.0%0.0
SLP460 (R)1Glu0.50.0%0.0
PRW041 (R)1ACh0.50.0%0.0
SLP066 (R)1Glu0.50.0%0.0
SLP411 (R)1Glu0.50.0%0.0
SMP076 (R)1GABA0.50.0%0.0
DNpe048 (L)1unc0.50.0%0.0
AN27X009 (R)1ACh0.50.0%0.0
SMP537 (L)1Glu0.50.0%0.0
SMP088 (L)1Glu0.50.0%0.0
SMP517 (R)1ACh0.50.0%0.0
CB1984 (R)1Glu0.50.0%0.0
SMP415_b (R)1ACh0.50.0%0.0
SMP523 (L)1ACh0.50.0%0.0
SMP229 (L)1Glu0.50.0%0.0
SMP229 (R)1Glu0.50.0%0.0
SMP307 (L)1unc0.50.0%0.0
PRW010 (L)1ACh0.50.0%0.0
SMP222 (L)1Glu0.50.0%0.0
SMP518 (L)1ACh0.50.0%0.0
SMP217 (R)1Glu0.50.0%0.0
CB1081 (R)1GABA0.50.0%0.0
SMP400 (R)1ACh0.50.0%0.0
SMP513 (L)1ACh0.50.0%0.0
SMP317 (R)1ACh0.50.0%0.0
SMP373 (R)1ACh0.50.0%0.0
CB4124 (L)1GABA0.50.0%0.0
LPN_a (R)1ACh0.50.0%0.0
SLP385 (R)1ACh0.50.0%0.0
IPC (R)1unc0.50.0%0.0