Male CNS – Cell Type Explorer

SMP341(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,485
Total Synapses
Post: 960 | Pre: 525
log ratio : -0.87
1,485
Mean Synapses
Post: 960 | Pre: 525
log ratio : -0.87
ACh(90.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SLP(L)36838.3%-1.7710820.6%
SMP(L)18919.7%0.5127051.4%
SCL(L)28329.5%-1.1113125.0%
PLP(L)10210.6%-2.97132.5%
CentralBrain-unspecified111.1%-inf00.0%
ICL(L)70.7%-1.2230.6%

Connectivity

Inputs

upstream
partner
#NTconns
SMP341
%
In
CV
SLP382 (L)1Glu647.1%0.0
SMP554 (L)1GABA596.6%0.0
CL317 (R)1Glu566.2%0.0
CL317 (L)1Glu485.4%0.0
SMP375 (L)1ACh303.3%0.0
LoVP3 (L)5Glu293.2%1.0
SLP122 (L)3ACh262.9%0.9
LoVP68 (L)1ACh252.8%0.0
CL318 (L)1GABA202.2%0.0
LHAV3g2 (L)2ACh192.1%0.4
CL126 (L)1Glu161.8%0.0
SMP375 (R)1ACh161.8%0.0
CB1412 (L)2GABA161.8%0.2
PLP013 (L)2ACh141.6%0.1
CB4132 (L)3ACh141.6%0.4
SLP230 (L)1ACh131.5%0.0
MeVP45 (L)1ACh131.5%0.0
LoVP16 (L)4ACh131.5%0.5
LoVP10 (L)4ACh131.5%0.4
LoVP73 (L)1ACh121.3%0.0
CL353 (R)3Glu121.3%0.2
mALD1 (R)1GABA111.2%0.0
CL364 (L)1Glu101.1%0.0
SLP321 (L)2ACh101.1%0.4
SMP277 (L)2Glu91.0%0.3
LHAV5c1 (L)2ACh91.0%0.1
PLP089 (L)4GABA91.0%0.5
OA-VUMa3 (M)1OA80.9%0.0
PLP002 (L)1GABA70.8%0.0
OA-VPM3 (R)1OA70.8%0.0
SLP438 (L)2unc70.8%0.7
SLP246 (L)1ACh60.7%0.0
SMP410 (L)1ACh60.7%0.0
CB1513 (L)1ACh60.7%0.0
LHPV2c5 (L)2unc60.7%0.7
SLP082 (L)3Glu60.7%0.7
AVLP003 (L)1GABA50.6%0.0
CL287 (L)1GABA50.6%0.0
LoVP11 (L)2ACh50.6%0.6
CL246 (L)1GABA40.4%0.0
LoVP75 (L)1ACh40.4%0.0
CL115 (L)1GABA40.4%0.0
CB0227 (L)1ACh40.4%0.0
MeVP36 (L)1ACh40.4%0.0
DNpe053 (L)1ACh40.4%0.0
GNG661 (R)1ACh40.4%0.0
PLP129 (L)1GABA30.3%0.0
SMP342 (L)1Glu30.3%0.0
SLP381 (L)1Glu30.3%0.0
mAL6 (R)1GABA30.3%0.0
SLP079 (L)1Glu30.3%0.0
CB1246 (L)1GABA30.3%0.0
SLP223 (L)1ACh30.3%0.0
PLP085 (L)1GABA30.3%0.0
SLP403 (L)1unc30.3%0.0
LHAV2g5 (L)1ACh30.3%0.0
SMP339 (L)1ACh30.3%0.0
PLP116 (R)1Glu30.3%0.0
LoVP74 (L)1ACh30.3%0.0
IB009 (L)1GABA30.3%0.0
LoVCLo2 (L)1unc30.3%0.0
5-HTPMPV01 (R)15-HT30.3%0.0
SLP007 (L)2Glu30.3%0.3
LoVP8 (L)2ACh30.3%0.3
LPT101 (L)2ACh30.3%0.3
PVLP008_c (L)2Glu30.3%0.3
SMP424 (L)2Glu30.3%0.3
LHPD3a2_a (L)1Glu20.2%0.0
CB3218 (L)1ACh20.2%0.0
LHPV4b1 (L)1Glu20.2%0.0
SLP392 (L)1ACh20.2%0.0
AOTU009 (L)1Glu20.2%0.0
LoVP35 (L)1ACh20.2%0.0
LoVP40 (L)1Glu20.2%0.0
CL031 (L)1Glu20.2%0.0
SLP137 (L)1Glu20.2%0.0
CB1056 (R)1Glu20.2%0.0
SLP002 (L)1GABA20.2%0.0
CL290 (L)1ACh20.2%0.0
PLP086 (L)1GABA20.2%0.0
CB1276 (L)1ACh20.2%0.0
LHPV6a1 (L)1ACh20.2%0.0
PLP181 (L)1Glu20.2%0.0
SMP383 (R)1ACh20.2%0.0
SMP445 (L)1Glu20.2%0.0
SMP533 (L)1Glu20.2%0.0
SMP588 (L)1unc20.2%0.0
LoVP107 (L)1ACh20.2%0.0
LoVP42 (L)1ACh20.2%0.0
MeVP38 (L)1ACh20.2%0.0
LoVCLo2 (R)1unc20.2%0.0
SLP457 (L)1unc20.2%0.0
SLP206 (L)1GABA20.2%0.0
LoVC2 (L)1GABA20.2%0.0
OA-VUMa6 (M)1OA20.2%0.0
SMP057 (L)2Glu20.2%0.0
SMP331 (L)2ACh20.2%0.0
SMP018 (L)2ACh20.2%0.0
SMP413 (L)2ACh20.2%0.0
CB3360 (L)2Glu20.2%0.0
SMP319 (L)2ACh20.2%0.0
SMP245 (L)2ACh20.2%0.0
CB3261 (L)2ACh20.2%0.0
SLP086 (L)2Glu20.2%0.0
IB004_a (L)1Glu10.1%0.0
CB3791 (L)1ACh10.1%0.0
SMP246 (L)1ACh10.1%0.0
LHPV4b9 (L)1Glu10.1%0.0
CB1275 (L)1unc10.1%0.0
SMP334 (L)1ACh10.1%0.0
PLP128 (R)1ACh10.1%0.0
CL291 (L)1ACh10.1%0.0
CL254 (L)1ACh10.1%0.0
CL357 (L)1unc10.1%0.0
AVLP595 (L)1ACh10.1%0.0
SMP143 (R)1unc10.1%0.0
SLP003 (L)1GABA10.1%0.0
SMP595 (L)1Glu10.1%0.0
SMP529 (L)1ACh10.1%0.0
SMP359 (L)1ACh10.1%0.0
CB3308 (L)1ACh10.1%0.0
CB0937 (L)1Glu10.1%0.0
LHPV5b2 (L)1ACh10.1%0.0
SMP350 (L)1ACh10.1%0.0
LHPV5b3 (L)1ACh10.1%0.0
SMP354 (L)1ACh10.1%0.0
CB3050 (L)1ACh10.1%0.0
SMP357 (L)1ACh10.1%0.0
CL018 (L)1Glu10.1%0.0
CB3093 (L)1ACh10.1%0.0
SMP279_a (L)1Glu10.1%0.0
CB1510 (R)1unc10.1%0.0
CL272_b3 (L)1ACh10.1%0.0
CL091 (L)1ACh10.1%0.0
SMP360 (L)1ACh10.1%0.0
CB3664 (L)1ACh10.1%0.0
SMP025 (L)1Glu10.1%0.0
CB2904 (L)1Glu10.1%0.0
KCab-p (L)1DA10.1%0.0
SLP395 (L)1Glu10.1%0.0
SMP284_a (L)1Glu10.1%0.0
LC28 (L)1ACh10.1%0.0
SMP455 (L)1ACh10.1%0.0
LoVP69 (L)1ACh10.1%0.0
CB3729 (L)1unc10.1%0.0
SMP284_b (L)1Glu10.1%0.0
CL064 (L)1GABA10.1%0.0
CL136 (L)1ACh10.1%0.0
CB2733 (L)1Glu10.1%0.0
CB1858 (L)1unc10.1%0.0
CB1026 (R)1unc10.1%0.0
PVLP008_b (L)1Glu10.1%0.0
PPL204 (L)1DA10.1%0.0
SMP513 (L)1ACh10.1%0.0
PLP069 (L)1Glu10.1%0.0
CL127 (L)1GABA10.1%0.0
LHAV3e1 (L)1ACh10.1%0.0
LHPV4e1 (L)1Glu10.1%0.0
SMP388 (L)1ACh10.1%0.0
SAD074 (L)1GABA10.1%0.0
SLP444 (R)1unc10.1%0.0
SMP042 (L)1Glu10.1%0.0
LNd_b (R)1ACh10.1%0.0
PLP094 (L)1ACh10.1%0.0
LHPV6g1 (L)1Glu10.1%0.0
AVLP708m (R)1ACh10.1%0.0
AOTU063_a (L)1Glu10.1%0.0
IB018 (L)1ACh10.1%0.0
MeVP52 (L)1ACh10.1%0.0
SLP447 (L)1Glu10.1%0.0
CL357 (R)1unc10.1%0.0
SMP001 (L)1unc10.1%0.0
SLP170 (L)1Glu10.1%0.0
AstA1 (R)1GABA10.1%0.0
oviIN (L)1GABA10.1%0.0

Outputs

downstream
partner
#NTconns
SMP341
%
Out
CV
MBON35 (L)1ACh12310.3%0.0
CL152 (L)2Glu635.3%0.4
CL031 (L)1Glu625.2%0.0
SLP082 (L)6Glu514.3%0.9
AOTU035 (L)1Glu393.3%0.0
SMP108 (L)1ACh383.2%0.0
SMP357 (L)3ACh373.1%0.6
SMP375 (L)1ACh363.0%0.0
CL172 (L)2ACh352.9%0.5
CB2300 (L)2ACh302.5%0.7
SMP091 (L)3GABA282.3%0.3
SMP369 (L)1ACh252.1%0.0
SMP392 (L)2ACh252.1%0.6
AOTU063_a (L)1Glu242.0%0.0
CL173 (L)1ACh231.9%0.0
CB0227 (L)1ACh221.8%0.0
SMP282 (L)3Glu221.8%0.3
IB009 (L)1GABA181.5%0.0
SLP438 (L)2unc181.5%0.4
SMP061 (L)2Glu181.5%0.2
CB2720 (L)4ACh181.5%0.3
LoVC3 (R)1GABA141.2%0.0
AOTU015 (L)2ACh131.1%0.4
LoVC3 (L)1GABA121.0%0.0
CL318 (L)1GABA110.9%0.0
CL136 (L)1ACh110.9%0.0
SMP516 (L)1ACh110.9%0.0
SLP079 (L)1Glu100.8%0.0
SMP528 (L)1Glu90.8%0.0
oviIN (L)1GABA90.8%0.0
SLP002 (L)4GABA90.8%0.5
CL364 (L)1Glu80.7%0.0
oviIN (R)1GABA80.7%0.0
SMP155 (L)2GABA80.7%0.8
SIP034 (L)2Glu80.7%0.5
PAL03 (L)1unc70.6%0.0
SMP176 (L)1ACh70.6%0.0
OLVC4 (L)1unc70.6%0.0
SMP375 (R)1ACh70.6%0.0
IB109 (L)1Glu70.6%0.0
AVLP590 (L)1Glu70.6%0.0
SMP554 (L)1GABA60.5%0.0
SMP051 (L)1ACh60.5%0.0
SMP588 (R)2unc60.5%0.3
ATL044 (L)1ACh50.4%0.0
LAL006 (L)1ACh50.4%0.0
SMP013 (L)1ACh50.4%0.0
PLP197 (L)1GABA50.4%0.0
SMP362 (L)2ACh50.4%0.6
CL365 (L)2unc50.4%0.2
SLP006 (L)1Glu40.3%0.0
SMP185 (L)1ACh40.3%0.0
CB4056 (L)1Glu40.3%0.0
CL172 (R)1ACh40.3%0.0
SMP414 (L)1ACh40.3%0.0
SLP412_b (L)1Glu40.3%0.0
CL006 (L)1ACh40.3%0.0
CL245 (L)1Glu40.3%0.0
CL170 (L)1ACh40.3%0.0
SMP043 (L)2Glu40.3%0.5
SMP067 (L)1Glu30.3%0.0
SMP342 (L)1Glu30.3%0.0
AOTU009 (L)1Glu30.3%0.0
CL126 (L)1Glu30.3%0.0
CL157 (L)1ACh30.3%0.0
LHCENT13_d (L)1GABA30.3%0.0
SMP360 (L)1ACh30.3%0.0
SMP284_a (L)1Glu30.3%0.0
SLP382 (L)1Glu30.3%0.0
SMP588 (L)1unc30.3%0.0
CL136 (R)1ACh30.3%0.0
CL083 (L)1ACh30.3%0.0
VES041 (L)1GABA30.3%0.0
SMP317 (L)1ACh20.2%0.0
SIP033 (L)1Glu20.2%0.0
CL357 (L)1unc20.2%0.0
PLP065 (L)1ACh20.2%0.0
AOTU011 (L)1Glu20.2%0.0
CB3664 (L)1ACh20.2%0.0
SMP039 (L)1unc20.2%0.0
CB1576 (R)1Glu20.2%0.0
CL129 (L)1ACh20.2%0.0
SMP409 (L)1ACh20.2%0.0
SMP413 (L)1ACh20.2%0.0
SMP284_b (L)1Glu20.2%0.0
IB016 (L)1Glu20.2%0.0
AOTU102m (L)1GABA20.2%0.0
SMP590_a (L)1unc20.2%0.0
CL028 (L)1GABA20.2%0.0
SMP340 (L)1ACh20.2%0.0
SMP390 (L)1ACh20.2%0.0
SMP339 (L)1ACh20.2%0.0
SMP079 (L)1GABA20.2%0.0
CB0029 (L)1ACh20.2%0.0
LHPV2h1 (L)1ACh20.2%0.0
MBON33 (L)1ACh20.2%0.0
IB018 (L)1ACh20.2%0.0
MeVP47 (L)1ACh20.2%0.0
OA-VUMa3 (M)1OA20.2%0.0
SLP170 (L)1Glu20.2%0.0
AN05B101 (L)1GABA10.1%0.0
SMP277 (L)1Glu10.1%0.0
LHAV3n1 (L)1ACh10.1%0.0
SMP495_b (L)1Glu10.1%0.0
AVLP189_b (L)1ACh10.1%0.0
SMP163 (L)1GABA10.1%0.0
SMP472 (L)1ACh10.1%0.0
CL175 (L)1Glu10.1%0.0
PLP254 (L)1ACh10.1%0.0
SLP069 (L)1Glu10.1%0.0
SMP337 (L)1Glu10.1%0.0
SMP595 (L)1Glu10.1%0.0
SMP529 (L)1ACh10.1%0.0
SMP081 (L)1Glu10.1%0.0
CL256 (L)1ACh10.1%0.0
SLP456 (L)1ACh10.1%0.0
CB1975 (L)1Glu10.1%0.0
CB2003 (L)1Glu10.1%0.0
CL147 (L)1Glu10.1%0.0
SMP229 (L)1Glu10.1%0.0
CB3360 (L)1Glu10.1%0.0
SMP319 (L)1ACh10.1%0.0
CB2401 (L)1Glu10.1%0.0
CB2931 (L)1Glu10.1%0.0
SMP328_c (L)1ACh10.1%0.0
CB4033 (L)1Glu10.1%0.0
CB3791 (L)1ACh10.1%0.0
SLP007 (L)1Glu10.1%0.0
LoVP8 (L)1ACh10.1%0.0
SMP358 (L)1ACh10.1%0.0
AVLP089 (L)1Glu10.1%0.0
LC28 (L)1ACh10.1%0.0
SMP590_a (R)1unc10.1%0.0
PLP089 (L)1GABA10.1%0.0
SMP406_c (L)1ACh10.1%0.0
CB2671 (L)1Glu10.1%0.0
CB1529 (L)1ACh10.1%0.0
SMP378 (L)1ACh10.1%0.0
SMP566 (L)1ACh10.1%0.0
CL244 (L)1ACh10.1%0.0
CL328 (L)1ACh10.1%0.0
SMP147 (L)1GABA10.1%0.0
SMP420 (L)1ACh10.1%0.0
LoVP66 (L)1ACh10.1%0.0
SMP057 (L)1Glu10.1%0.0
SLP396 (L)1ACh10.1%0.0
SMP401 (L)1ACh10.1%0.0
SMP143 (L)1unc10.1%0.0
SMP391 (L)1ACh10.1%0.0
SLP136 (L)1Glu10.1%0.0
CB3906 (L)1ACh10.1%0.0
SLP437 (L)1GABA10.1%0.0
SMP422 (L)1ACh10.1%0.0
LoVP39 (L)1ACh10.1%0.0
CL026 (L)1Glu10.1%0.0
CL353 (L)1Glu10.1%0.0
CL317 (R)1Glu10.1%0.0
ATL040 (L)1Glu10.1%0.0
SMPp&v1B_M02 (L)1unc10.1%0.0
SMP255 (L)1ACh10.1%0.0
SMP153_a (L)1ACh10.1%0.0
SMP152 (L)1ACh10.1%0.0
CL090_e (L)1ACh10.1%0.0
CL317 (L)1Glu10.1%0.0
SMP311 (L)1ACh10.1%0.0
SMP080 (L)1ACh10.1%0.0
CL216 (L)1ACh10.1%0.0
SLP386 (L)1Glu10.1%0.0
SMP050 (L)1GABA10.1%0.0
SMP495_a (L)1Glu10.1%0.0
CL027 (R)1GABA10.1%0.0
LHPV10b1 (L)1ACh10.1%0.0
PLP001 (L)1GABA10.1%0.0
CL287 (L)1GABA10.1%0.0
AOTU014 (L)1ACh10.1%0.0
VES075 (L)1ACh10.1%0.0
LoVC4 (L)1GABA10.1%0.0
AstA1 (L)1GABA10.1%0.0