Male CNS – Cell Type Explorer

SMP340(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,234
Total Synapses
Post: 1,523 | Pre: 711
log ratio : -1.10
2,234
Mean Synapses
Post: 1,523 | Pre: 711
log ratio : -1.10
ACh(92.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(R)51633.9%-0.1745864.4%
PLP(R)37724.8%-2.54659.1%
SLP(R)26917.7%-2.03669.3%
SCL(R)24015.8%-1.82689.6%
ICL(R)996.5%-1.14456.3%
CentralBrain-unspecified221.4%-1.2991.3%

Connectivity

Inputs

upstream
partner
#NTconns
SMP340
%
In
CV
MeVP20 (R)3Glu614.2%0.2
LT68 (R)2Glu533.6%0.4
OA-VUMa3 (M)2OA483.3%0.4
SMP516 (R)2ACh453.1%0.3
SMP516 (L)2ACh422.9%0.5
CB0998 (R)2ACh372.5%0.2
SMP081 (R)2Glu372.5%0.1
SMP018 (R)4ACh352.4%0.4
oviIN (R)1GABA342.3%0.0
SLP004 (R)1GABA302.1%0.0
MeVP12 (R)9ACh292.0%0.7
LoVP68 (R)1ACh281.9%0.0
PLP177 (R)1ACh281.9%0.0
aMe25 (R)1Glu261.8%0.0
MeVP11 (R)12ACh251.7%0.5
SMP520 (L)1ACh241.6%0.0
LoVP42 (R)1ACh241.6%0.0
SLP003 (R)1GABA231.6%0.0
LoVP4 (R)3ACh231.6%0.6
CL008 (R)2Glu211.4%0.1
LoVP1 (R)5Glu201.4%0.5
SMP554 (R)1GABA191.3%0.0
AOTU056 (R)2GABA191.3%0.7
CB1072 (L)5ACh191.3%0.6
CL318 (R)1GABA181.2%0.0
CL133 (R)1Glu181.2%0.0
SAD082 (L)1ACh161.1%0.0
LoVP74 (R)1ACh151.0%0.0
MeVP52 (R)1ACh151.0%0.0
SAD082 (R)1ACh141.0%0.0
MeVP38 (R)1ACh130.9%0.0
SMP459 (R)2ACh130.9%0.8
LoVP41 (R)1ACh120.8%0.0
SLP381 (R)1Glu120.8%0.0
SMP163 (R)1GABA120.8%0.0
LoVP100 (R)1ACh120.8%0.0
mALD1 (L)1GABA120.8%0.0
CB0670 (R)1ACh110.8%0.0
CL130 (R)1ACh110.8%0.0
CB4158 (R)2ACh110.8%0.5
CL340 (L)2ACh100.7%0.4
CL353 (L)2Glu100.7%0.2
SMP455 (R)1ACh90.6%0.0
SMP520 (R)1ACh90.6%0.0
5-HTPMPV01 (L)15-HT90.6%0.0
LoVP16 (R)2ACh90.6%0.3
CL225 (L)2ACh90.6%0.1
mALB5 (L)1GABA80.5%0.0
CL254 (R)2ACh80.5%0.8
CL353 (R)4Glu80.5%0.6
SMP201 (R)1Glu70.5%0.0
SLP465 (L)1ACh70.5%0.0
LHAV3e1 (R)1ACh70.5%0.0
SMP277 (R)2Glu70.5%0.7
LC27 (R)4ACh70.5%0.7
LoVP6 (R)4ACh70.5%0.5
SLP082 (R)4Glu70.5%0.2
SMP079 (R)1GABA60.4%0.0
SMP445 (R)1Glu60.4%0.0
LHAV2d1 (R)1ACh60.4%0.0
OLVC5 (R)1ACh60.4%0.0
LoVC20 (L)1GABA60.4%0.0
LoVCLo3 (L)1OA60.4%0.0
SLP465 (R)1ACh50.3%0.0
CL288 (R)1GABA50.3%0.0
CL157 (R)1ACh50.3%0.0
oviIN (L)1GABA50.3%0.0
CL340 (R)2ACh50.3%0.2
LoVP3 (R)3Glu50.3%0.3
MeVP1 (R)5ACh50.3%0.0
SMP527 (R)1ACh40.3%0.0
SMP049 (R)1GABA40.3%0.0
SMP279_b (R)1Glu40.3%0.0
SMP375 (L)1ACh40.3%0.0
LoVP56 (R)1Glu40.3%0.0
LoVP70 (R)1ACh40.3%0.0
SMPp&v1B_M02 (L)1unc40.3%0.0
SMP080 (R)1ACh40.3%0.0
CL357 (R)1unc40.3%0.0
CB1072 (R)2ACh40.3%0.0
LoVP5 (R)3ACh40.3%0.4
CB3049 (R)3ACh40.3%0.4
PLP181 (R)3Glu40.3%0.4
CL090_d (R)3ACh40.3%0.4
SMPp&v1B_M02 (R)1unc30.2%0.0
PAL03 (R)1unc30.2%0.0
SMP246 (R)1ACh30.2%0.0
CB2032 (R)1ACh30.2%0.0
CB1403 (R)1ACh30.2%0.0
SMP512 (R)1ACh30.2%0.0
CL141 (R)1Glu30.2%0.0
SMP200 (R)1Glu30.2%0.0
LoVP44 (R)1ACh30.2%0.0
5-HTPMPV01 (R)15-HT30.2%0.0
CRE040 (R)1GABA30.2%0.0
LoVCLo3 (R)1OA30.2%0.0
CB3044 (L)2ACh30.2%0.3
LoVC25 (L)2ACh30.2%0.3
MeVPMe4 (L)2Glu30.2%0.3
SLP438 (R)2unc30.2%0.3
IB022 (R)1ACh20.1%0.0
SMP155 (R)1GABA20.1%0.0
AVLP075 (L)1Glu20.1%0.0
SMP057 (R)1Glu20.1%0.0
SMP143 (R)1unc20.1%0.0
PLP129 (R)1GABA20.1%0.0
LHPV6f5 (R)1ACh20.1%0.0
CB0976 (R)1Glu20.1%0.0
SLP158 (R)1ACh20.1%0.0
SMP064 (R)1Glu20.1%0.0
PLP180 (R)1Glu20.1%0.0
SMP143 (L)1unc20.1%0.0
CB3676 (R)1Glu20.1%0.0
CL086_d (R)1ACh20.1%0.0
CL070_a (R)1ACh20.1%0.0
LoVP73 (R)1ACh20.1%0.0
PLP130 (R)1ACh20.1%0.0
CB0633 (R)1Glu20.1%0.0
LNd_b (L)1ACh20.1%0.0
LoVCLo2 (R)1unc20.1%0.0
LoVCLo2 (L)1unc20.1%0.0
MeVPMe3 (L)1Glu20.1%0.0
LoVC2 (L)1GABA20.1%0.0
GNG103 (R)1GABA20.1%0.0
SMP067 (R)2Glu20.1%0.0
SMP069 (R)2Glu20.1%0.0
SLP361 (R)2ACh20.1%0.0
LT43 (R)2GABA20.1%0.0
AOTU011 (R)2Glu20.1%0.0
SMP279_a (R)2Glu20.1%0.0
CL134 (R)2Glu20.1%0.0
SLP098 (R)2Glu20.1%0.0
SMP588 (L)2unc20.1%0.0
OA-VUMa6 (M)2OA20.1%0.0
SMP066 (R)1Glu10.1%0.0
SLP295 (R)1Glu10.1%0.0
SMP328_c (R)1ACh10.1%0.0
WED184 (R)1GABA10.1%0.0
SMP371_a (R)1Glu10.1%0.0
SMP380 (R)1ACh10.1%0.0
PAL03 (L)1unc10.1%0.0
IB109 (R)1Glu10.1%0.0
SMP369 (R)1ACh10.1%0.0
SMP470 (R)1ACh10.1%0.0
SMP091 (R)1GABA10.1%0.0
CL357 (L)1unc10.1%0.0
CB4072 (L)1ACh10.1%0.0
SMP406_c (R)1ACh10.1%0.0
SMP528 (R)1Glu10.1%0.0
SMP047 (R)1Glu10.1%0.0
CL007 (R)1ACh10.1%0.0
AVLP062 (L)1Glu10.1%0.0
SMP438 (R)1ACh10.1%0.0
GNG103 (L)1GABA10.1%0.0
SMP359 (R)1ACh10.1%0.0
CB2671 (R)1Glu10.1%0.0
SMP018 (L)1ACh10.1%0.0
CRE037 (L)1Glu10.1%0.0
SMP281 (R)1Glu10.1%0.0
SMP061 (R)1Glu10.1%0.0
LoVP8 (R)1ACh10.1%0.0
SMP459 (L)1ACh10.1%0.0
SMP345 (R)1Glu10.1%0.0
SMP299 (R)1GABA10.1%0.0
CB1050 (R)1ACh10.1%0.0
CB3074 (L)1ACh10.1%0.0
CL151 (R)1ACh10.1%0.0
SMP039 (R)1unc10.1%0.0
CB3360 (R)1Glu10.1%0.0
CB1269 (R)1ACh10.1%0.0
LC28 (R)1ACh10.1%0.0
SMP245 (R)1ACh10.1%0.0
LC40 (R)1ACh10.1%0.0
PLP089 (R)1GABA10.1%0.0
SMP317 (R)1ACh10.1%0.0
SMP279_c (R)1Glu10.1%0.0
CL091 (R)1ACh10.1%0.0
SMP378 (L)1ACh10.1%0.0
AOTU055 (R)1GABA10.1%0.0
PLP182 (R)1Glu10.1%0.0
SMP331 (R)1ACh10.1%0.0
CB4069 (L)1ACh10.1%0.0
PLP145 (R)1ACh10.1%0.0
AVLP062 (R)1Glu10.1%0.0
IB014 (R)1GABA10.1%0.0
SMP403 (R)1ACh10.1%0.0
CL245 (R)1Glu10.1%0.0
SMP284_a (R)1Glu10.1%0.0
SMP057 (L)1Glu10.1%0.0
PLP_TBD1 (R)1Glu10.1%0.0
LoVP51 (R)1ACh10.1%0.0
SMP274 (R)1Glu10.1%0.0
CL244 (R)1ACh10.1%0.0
CL090_c (R)1ACh10.1%0.0
SMP424 (R)1Glu10.1%0.0
CL090_e (R)1ACh10.1%0.0
CB1950 (R)1ACh10.1%0.0
CL087 (R)1ACh10.1%0.0
AVLP060 (R)1Glu10.1%0.0
SLP360_d (R)1ACh10.1%0.0
LoVP75 (R)1ACh10.1%0.0
PLP218 (R)1Glu10.1%0.0
SMP508 (L)1ACh10.1%0.0
SMP373 (R)1ACh10.1%0.0
PLP066 (R)1ACh10.1%0.0
LoVP38 (R)1Glu10.1%0.0
CL086_a (R)1ACh10.1%0.0
PVLP104 (R)1GABA10.1%0.0
CB1803 (R)1ACh10.1%0.0
PLP079 (R)1Glu10.1%0.0
SMP313 (R)1ACh10.1%0.0
SLP444 (R)1unc10.1%0.0
SMP333 (R)1ACh10.1%0.0
CL246 (R)1GABA10.1%0.0
SMP375 (R)1ACh10.1%0.0
MeVP21 (R)1ACh10.1%0.0
IB050 (R)1Glu10.1%0.0
LT69 (R)1ACh10.1%0.0
LoVP69 (R)1ACh10.1%0.0
AVLP508 (L)1ACh10.1%0.0
CL175 (R)1Glu10.1%0.0
MeVP46 (R)1Glu10.1%0.0
aMe6a (R)1ACh10.1%0.0
PLP144 (R)1GABA10.1%0.0
LHPV6g1 (R)1Glu10.1%0.0
SLP207 (R)1GABA10.1%0.0
LoVP58 (R)1ACh10.1%0.0
MeVC24 (R)1Glu10.1%0.0
SMP175 (R)1ACh10.1%0.0
CL036 (R)1Glu10.1%0.0
CL028 (R)1GABA10.1%0.0
CL287 (R)1GABA10.1%0.0
MeVP25 (R)1ACh10.1%0.0
pC1x_d (L)1ACh10.1%0.0
aMe17b (R)1GABA10.1%0.0
PLP131 (R)1GABA10.1%0.0
CL030 (R)1Glu10.1%0.0
AVLP590 (R)1Glu10.1%0.0
LT58 (R)1Glu10.1%0.0
LoVC18 (R)1DA10.1%0.0
AN05B101 (R)1GABA10.1%0.0
DNae009 (R)1ACh10.1%0.0
CL366 (L)1GABA10.1%0.0

Outputs

downstream
partner
#NTconns
SMP340
%
Out
CV
IB018 (R)1ACh847.0%0.0
SMP081 (R)2Glu766.3%0.2
SMP080 (R)1ACh615.1%0.0
LoVC3 (R)1GABA594.9%0.0
LoVC3 (L)1GABA574.7%0.0
SIP034 (R)2Glu564.7%0.2
SMP066 (R)2Glu433.6%0.1
SMP455 (R)1ACh373.1%0.0
IB009 (R)1GABA272.2%0.0
CRE075 (R)1Glu242.0%0.0
CL327 (R)1ACh242.0%0.0
CB1876 (R)5ACh231.9%0.6
IB071 (R)2ACh211.7%0.0
SMP424 (R)2Glu191.6%0.1
SMP566 (R)3ACh161.3%0.5
ATL008 (R)1Glu141.2%0.0
SMP067 (R)2Glu141.2%0.1
SMP201 (R)1Glu131.1%0.0
LoVCLo1 (R)1ACh131.1%0.0
SMP277 (R)3Glu131.1%0.6
AVLP032 (R)1ACh110.9%0.0
CB0633 (R)1Glu110.9%0.0
CL328 (R)2ACh110.9%0.5
PS272 (R)2ACh100.8%0.8
SMP369 (R)1ACh90.7%0.0
SLP308 (R)1Glu90.7%0.0
LoVC2 (R)1GABA80.7%0.0
SMP184 (R)1ACh80.7%0.0
SMP091 (R)2GABA80.7%0.8
MeVP20 (R)3Glu80.7%0.6
SMP176 (R)1ACh70.6%0.0
SMP494 (R)1Glu70.6%0.0
PS318 (R)1ACh70.6%0.0
PLP208 (R)1ACh70.6%0.0
CL111 (R)1ACh70.6%0.0
SMP151 (R)2GABA70.6%0.4
CL143 (R)1Glu60.5%0.0
SMP274 (R)1Glu60.5%0.0
SMP202 (R)1ACh60.5%0.0
PLP055 (R)2ACh60.5%0.7
SMP057 (R)2Glu60.5%0.3
CB3360 (R)3Glu60.5%0.0
CB0976 (R)1Glu50.4%0.0
CB4119 (R)1Glu50.4%0.0
SMP530_a (R)1Glu50.4%0.0
IB110 (R)1Glu50.4%0.0
DNpe022 (R)1ACh50.4%0.0
AOTU035 (R)1Glu50.4%0.0
CB3932 (R)2ACh50.4%0.6
CL303 (R)1ACh40.3%0.0
CRE108 (R)1ACh40.3%0.0
CB2671 (R)1Glu40.3%0.0
IB070 (R)1ACh40.3%0.0
CL090_d (R)1ACh40.3%0.0
CL090_b (R)1ACh40.3%0.0
CL090_e (R)1ACh40.3%0.0
SMP542 (R)1Glu40.3%0.0
PLP079 (R)1Glu40.3%0.0
SMPp&v1B_M02 (L)1unc40.3%0.0
SMP185 (R)1ACh40.3%0.0
LoVP42 (R)1ACh40.3%0.0
SMP520 (R)2ACh40.3%0.5
aMe30 (R)2Glu40.3%0.5
SMP207 (R)2Glu40.3%0.0
LoVP5 (R)3ACh40.3%0.4
CB0998 (R)2ACh40.3%0.0
AOTU038 (R)1Glu30.2%0.0
CL063 (R)1GABA30.2%0.0
SMP527 (R)1ACh30.2%0.0
SMP047 (R)1Glu30.2%0.0
IB010 (R)1GABA30.2%0.0
LT43 (R)1GABA30.2%0.0
SMP208 (R)1Glu30.2%0.0
PAL03 (R)1unc30.2%0.0
SMP331 (R)1ACh30.2%0.0
AOTU047 (R)1Glu30.2%0.0
SMP532_a (R)1Glu30.2%0.0
CL225 (R)1ACh30.2%0.0
CB3791 (R)1ACh30.2%0.0
CB1803 (R)1ACh30.2%0.0
SMP423 (R)1ACh30.2%0.0
SMP254 (R)1ACh30.2%0.0
CL287 (R)1GABA30.2%0.0
CL031 (R)1Glu30.2%0.0
aMe20 (R)1ACh30.2%0.0
oviIN (R)1GABA30.2%0.0
CL134 (R)2Glu30.2%0.3
LC33 (R)2Glu30.2%0.3
SMP530_b (R)1Glu20.2%0.0
CRE040 (L)1GABA20.2%0.0
PLP228 (R)1ACh20.2%0.0
PAL03 (L)1unc20.2%0.0
CL318 (R)1GABA20.2%0.0
ATL023 (R)1Glu20.2%0.0
PAM01 (R)1DA20.2%0.0
SMP342 (R)1Glu20.2%0.0
SLP295 (R)1Glu20.2%0.0
SMP162 (R)1Glu20.2%0.0
LC28 (R)1ACh20.2%0.0
SMP317 (R)1ACh20.2%0.0
SMP493 (R)1ACh20.2%0.0
CB4072 (R)1ACh20.2%0.0
SMP567 (R)1ACh20.2%0.0
SIP033 (R)1Glu20.2%0.0
PLP181 (R)1Glu20.2%0.0
SMP037 (R)1Glu20.2%0.0
CL368 (R)1Glu20.2%0.0
5-HTPMPV01 (L)15-HT20.2%0.0
SMP472 (R)1ACh20.2%0.0
LoVC1 (L)1Glu20.2%0.0
CL251 (R)1ACh20.2%0.0
CL014 (R)2Glu20.2%0.0
CL152 (R)2Glu20.2%0.0
SMP018 (R)2ACh20.2%0.0
CB2988 (R)2Glu20.2%0.0
SMP282 (R)2Glu20.2%0.0
SMP279_a (R)2Glu20.2%0.0
SMP061 (R)2Glu20.2%0.0
LoVP81 (R)2ACh20.2%0.0
AOTU056 (R)2GABA20.2%0.0
SMP581 (R)1ACh10.1%0.0
CL191_a (R)1Glu10.1%0.0
SMP093 (R)1Glu10.1%0.0
SMP459 (R)1ACh10.1%0.0
SMP425 (R)1Glu10.1%0.0
SMP544 (R)1GABA10.1%0.0
SMP355 (R)1ACh10.1%0.0
SMP441 (R)1Glu10.1%0.0
SMP142 (R)1unc10.1%0.0
SMP471 (R)1ACh10.1%0.0
SMP049 (R)1GABA10.1%0.0
SMP506 (R)1ACh10.1%0.0
SMP445 (R)1Glu10.1%0.0
SLP324 (R)1ACh10.1%0.0
PLP129 (R)1GABA10.1%0.0
SMP316_a (R)1ACh10.1%0.0
CL011 (R)1Glu10.1%0.0
CB3120 (R)1ACh10.1%0.0
SMP332 (R)1ACh10.1%0.0
LHPV6h1_b (R)1ACh10.1%0.0
CL353 (R)1Glu10.1%0.0
CB2401 (R)1Glu10.1%0.0
SMP065 (R)1Glu10.1%0.0
SMP281 (R)1Glu10.1%0.0
SMP315 (R)1ACh10.1%0.0
LoVP4 (R)1ACh10.1%0.0
SMP086 (R)1Glu10.1%0.0
LoVP8 (R)1ACh10.1%0.0
AOTU058 (R)1GABA10.1%0.0
CB0943 (R)1ACh10.1%0.0
SMP516 (R)1ACh10.1%0.0
SMP455 (L)1ACh10.1%0.0
MeVP11 (R)1ACh10.1%0.0
LoVP6 (R)1ACh10.1%0.0
SMP022 (R)1Glu10.1%0.0
SMP702m (R)1Glu10.1%0.0
SMP039 (R)1unc10.1%0.0
CB3553 (R)1Glu10.1%0.0
CB0937 (R)1Glu10.1%0.0
CB4069 (R)1ACh10.1%0.0
SLP085 (R)1Glu10.1%0.0
CB3249 (R)1Glu10.1%0.0
PLP121 (R)1ACh10.1%0.0
SLP081 (R)1Glu10.1%0.0
CB4242 (R)1ACh10.1%0.0
SMP383 (R)1ACh10.1%0.0
CB1269 (R)1ACh10.1%0.0
CB2032 (R)1ACh10.1%0.0
PS206 (R)1ACh10.1%0.0
SMP398_a (R)1ACh10.1%0.0
CB4158 (R)1ACh10.1%0.0
SMP328_b (R)1ACh10.1%0.0
SMP391 (R)1ACh10.1%0.0
SMP393 (R)1ACh10.1%0.0
CL244 (R)1ACh10.1%0.0
AVLP089 (R)1Glu10.1%0.0
SMP512 (R)1ACh10.1%0.0
CB1950 (R)1ACh10.1%0.0
SMP392 (R)1ACh10.1%0.0
SLP360_d (R)1ACh10.1%0.0
PLP122_a (R)1ACh10.1%0.0
aMe1 (R)1GABA10.1%0.0
SMP516 (L)1ACh10.1%0.0
SMP291 (R)1ACh10.1%0.0
CL086_a (R)1ACh10.1%0.0
CL127 (R)1GABA10.1%0.0
SMP200 (R)1Glu10.1%0.0
DNpe053 (R)1ACh10.1%0.0
SMP313 (R)1ACh10.1%0.0
LT68 (R)1Glu10.1%0.0
LPN_a (R)1ACh10.1%0.0
CL074 (R)1ACh10.1%0.0
SMP588 (L)1unc10.1%0.0
SMP188 (R)1ACh10.1%0.0
LoVP60 (R)1ACh10.1%0.0
LT69 (R)1ACh10.1%0.0
SMP255 (R)1ACh10.1%0.0
SLP304 (R)1unc10.1%0.0
CL070_a (R)1ACh10.1%0.0
CL175 (R)1Glu10.1%0.0
PLP197 (R)1GABA10.1%0.0
SLP060 (R)1GABA10.1%0.0
SMP148 (R)1GABA10.1%0.0
PLP130 (R)1ACh10.1%0.0
AOTU009 (R)1Glu10.1%0.0
CL098 (R)1ACh10.1%0.0
LoVP63 (R)1ACh10.1%0.0
CL155 (R)1ACh10.1%0.0
LoVP79 (R)1ACh10.1%0.0
LoVP96 (R)1Glu10.1%0.0
DNpe042 (R)1ACh10.1%0.0
IB109 (L)1Glu10.1%0.0
CL071_b (R)1ACh10.1%0.0
CL216 (R)1ACh10.1%0.0
CL030 (R)1Glu10.1%0.0
LoVCLo2 (L)1unc10.1%0.0
SMP163 (R)1GABA10.1%0.0
PLP211 (R)1unc10.1%0.0
CL135 (L)1ACh10.1%0.0
PLP032 (R)1ACh10.1%0.0
LoVC18 (R)1DA10.1%0.0
LoVC2 (L)1GABA10.1%0.0
MeVC3 (R)1ACh10.1%0.0
CL357 (R)1unc10.1%0.0
DNp103 (R)1ACh10.1%0.0
DNp27 (R)1ACh10.1%0.0