Male CNS – Cell Type Explorer

SMP200(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
3,245
Total Synapses
Post: 2,425 | Pre: 820
log ratio : -1.56
3,245
Mean Synapses
Post: 2,425 | Pre: 820
log ratio : -1.56
Glu(84.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(L)1,60766.3%-0.9881599.4%
PLP(L)53922.2%-9.0710.1%
SCL(L)1225.0%-5.3530.4%
CentralBrain-unspecified1064.4%-6.7310.1%
SLP(L)471.9%-inf00.0%
ICL(L)40.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SMP200
%
In
CV
SMP271 (L)2GABA2309.7%0.1
SMP201 (L)1Glu2088.8%0.0
MeVP11 (L)23ACh1205.1%0.6
aMe24 (L)1Glu1164.9%0.0
aMe3 (L)1Glu1074.5%0.0
SMP528 (L)1Glu944.0%0.0
SMP520 (R)2ACh753.2%0.4
CL029_a (L)1Glu652.7%0.0
MeVC20 (L)2Glu652.7%0.0
SMP520 (L)2ACh552.3%0.2
aMe1 (L)2GABA492.1%0.6
aMe24 (R)1Glu401.7%0.0
pC1x_d (R)1ACh391.6%0.0
SMP255 (L)1ACh381.6%0.0
aMe20 (L)1ACh381.6%0.0
SMP530_a (L)1Glu351.5%0.0
SMP331 (L)5ACh271.1%0.5
CL029_b (L)1Glu261.1%0.0
pC1x_d (L)1ACh261.1%0.0
MeVP29 (L)1ACh231.0%0.0
oviIN (L)1GABA190.8%0.0
SMP279_a (L)3Glu190.8%0.8
SMP317 (L)4ACh190.8%0.5
SMP332 (L)2ACh180.8%0.2
SMP049 (L)1GABA170.7%0.0
DNpe053 (R)1ACh170.7%0.0
SLP443 (L)1Glu170.7%0.0
VES092 (R)1GABA160.7%0.0
LoVP42 (L)1ACh160.7%0.0
SMP421 (L)1ACh150.6%0.0
DNpe053 (L)1ACh150.6%0.0
SMP425 (L)1Glu140.6%0.0
SMP388 (L)1ACh140.6%0.0
SMP516 (L)1ACh130.5%0.0
MeVPaMe2 (R)1Glu130.5%0.0
SMP319 (L)3ACh130.5%1.1
SMP043 (L)2Glu130.5%0.4
SMP346 (L)2Glu130.5%0.2
CL340 (L)2ACh120.5%0.5
SLP322 (L)3ACh120.5%0.7
MeLo6 (L)3ACh120.5%0.7
SMP516 (R)2ACh110.5%0.5
SMP427 (L)3ACh110.5%0.5
SMP530_b (L)1Glu100.4%0.0
PLP119 (L)1Glu100.4%0.0
oviIN (R)1GABA100.4%0.0
VP5+Z_adPN (L)1ACh90.4%0.0
SMPp&v1B_M02 (R)1unc80.3%0.0
SMP444 (L)1Glu80.3%0.0
SMP042 (L)1Glu80.3%0.0
SMP339 (L)1ACh80.3%0.0
SMP495_a (L)1Glu80.3%0.0
OCG02c (R)2ACh80.3%0.0
LHPD1b1 (L)1Glu70.3%0.0
SMP383 (R)1ACh70.3%0.0
SLP004 (L)1GABA70.3%0.0
OCG02c (L)2ACh70.3%0.7
SMP314 (L)2ACh70.3%0.1
GNG534 (L)1GABA60.3%0.0
LoVP96 (L)1Glu60.3%0.0
MeVPMe3 (R)1Glu60.3%0.0
SLP270 (L)1ACh60.3%0.0
OA-VUMa3 (M)1OA60.3%0.0
PLP186 (L)2Glu60.3%0.7
SMP143 (R)2unc60.3%0.3
SMP162 (L)2Glu60.3%0.3
VES092 (L)1GABA50.2%0.0
SMP251 (R)1ACh50.2%0.0
SLP460 (L)1Glu50.2%0.0
CB0670 (L)1ACh50.2%0.0
DN1a (L)1Glu50.2%0.0
MeVPaMe1 (R)1ACh50.2%0.0
MeVP41 (L)1ACh50.2%0.0
MeVP14 (L)3ACh50.2%0.6
SMP392 (L)2ACh50.2%0.2
SMP052 (L)2ACh50.2%0.2
SMP163 (L)1GABA40.2%0.0
DNpe048 (L)1unc40.2%0.0
PLP131 (L)1GABA40.2%0.0
PLP144 (L)1GABA40.2%0.0
SMP337 (L)1Glu40.2%0.0
SMP176 (L)1ACh40.2%0.0
SMP729m (L)1Glu40.2%0.0
SLP267 (L)1Glu40.2%0.0
SMP492 (L)1ACh40.2%0.0
SMP218 (L)1Glu40.2%0.0
SMP404 (L)1ACh40.2%0.0
CL134 (L)1Glu40.2%0.0
SMP508 (R)1ACh40.2%0.0
SMP531 (L)1Glu40.2%0.0
SMP161 (L)1Glu40.2%0.0
SMP402 (L)1ACh40.2%0.0
LHAV2d1 (L)1ACh40.2%0.0
5-HTPMPV01 (R)15-HT40.2%0.0
MeVP1 (L)3ACh40.2%0.4
PLP129 (L)1GABA30.1%0.0
SLP379 (L)1Glu30.1%0.0
SMP175 (L)1ACh30.1%0.0
SLP358 (L)1Glu30.1%0.0
SMP229 (L)1Glu30.1%0.0
SMP354 (L)1ACh30.1%0.0
SLP412_a (L)1Glu30.1%0.0
SMP284_b (L)1Glu30.1%0.0
PLP122_a (L)1ACh30.1%0.0
LHPV10a1b (L)1ACh30.1%0.0
CL133 (L)1Glu30.1%0.0
MeVP38 (L)1ACh30.1%0.0
LoVCLo3 (L)1OA30.1%0.0
SMP424 (L)2Glu30.1%0.3
SMP472 (L)2ACh30.1%0.3
CL196 (L)2Glu30.1%0.3
SMP268 (L)2Glu30.1%0.3
SMP581 (L)2ACh30.1%0.3
aMe5 (L)2ACh30.1%0.3
LoVP9 (L)3ACh30.1%0.0
KCg-d (L)3DA30.1%0.0
aMe6a (L)1ACh20.1%0.0
SMP044 (L)1Glu20.1%0.0
AVLP428 (L)1Glu20.1%0.0
pC1x_a (L)1ACh20.1%0.0
SLP381 (L)1Glu20.1%0.0
SLP003 (L)1GABA20.1%0.0
SMP082 (R)1Glu20.1%0.0
SMP509 (L)1ACh20.1%0.0
PLP199 (L)1GABA20.1%0.0
CL018 (L)1Glu20.1%0.0
SMP267 (L)1Glu20.1%0.0
CB3360 (L)1Glu20.1%0.0
SMP428_a (L)1ACh20.1%0.0
SMP414 (L)1ACh20.1%0.0
SMP275 (L)1Glu20.1%0.0
SMP079 (L)1GABA20.1%0.0
PLP042_a (L)1Glu20.1%0.0
SMP416 (L)1ACh20.1%0.0
CL099 (L)1ACh20.1%0.0
SMP240 (L)1ACh20.1%0.0
CL141 (L)1Glu20.1%0.0
CL269 (L)1ACh20.1%0.0
SMP514 (R)1ACh20.1%0.0
LoVP73 (L)1ACh20.1%0.0
SMP313 (L)1ACh20.1%0.0
LPT101 (L)1ACh20.1%0.0
SMP189 (L)1ACh20.1%0.0
SLP368 (R)1ACh20.1%0.0
SMP372 (L)1ACh20.1%0.0
SLP076 (L)1Glu20.1%0.0
aMe9 (R)1ACh20.1%0.0
SMP272 (L)1ACh20.1%0.0
CL287 (L)1GABA20.1%0.0
SMP051 (L)1ACh20.1%0.0
LoVC23 (R)1GABA20.1%0.0
MeVPMe3 (L)1Glu20.1%0.0
SMP061 (L)2Glu20.1%0.0
LC27 (L)2ACh20.1%0.0
SMP410 (L)2ACh20.1%0.0
SMP315 (L)2ACh20.1%0.0
SMP143 (L)2unc20.1%0.0
SMP411 (L)1ACh10.0%0.0
SMP085 (R)1Glu10.0%0.0
SMP277 (L)1Glu10.0%0.0
DNp32 (L)1unc10.0%0.0
CB1403 (L)1ACh10.0%0.0
DNp27 (L)1ACh10.0%0.0
MeVP16 (L)1Glu10.0%0.0
aMe12 (L)1ACh10.0%0.0
MeVC23 (L)1Glu10.0%0.0
SMP089 (L)1Glu10.0%0.0
PAL03 (L)1unc10.0%0.0
CL087 (L)1ACh10.0%0.0
MeVPLo2 (L)1ACh10.0%0.0
AVLP075 (L)1Glu10.0%0.0
CB0656 (L)1ACh10.0%0.0
PLP130 (L)1ACh10.0%0.0
CL126 (L)1Glu10.0%0.0
CL157 (L)1ACh10.0%0.0
SMP596 (L)1ACh10.0%0.0
SMP155 (L)1GABA10.0%0.0
SMP387 (L)1ACh10.0%0.0
CL357 (L)1unc10.0%0.0
CL175 (L)1Glu10.0%0.0
CL070_a (L)1ACh10.0%0.0
CL070_b (L)1ACh10.0%0.0
SLP438 (L)1unc10.0%0.0
SMP084 (L)1Glu10.0%0.0
LoVP60 (L)1ACh10.0%0.0
SMP598 (L)1Glu10.0%0.0
SLP134 (L)1Glu10.0%0.0
ATL008 (R)1Glu10.0%0.0
LoVP2 (L)1Glu10.0%0.0
SMP067 (L)1Glu10.0%0.0
CB1733 (L)1Glu10.0%0.0
LoVP5 (L)1ACh10.0%0.0
SMP321_b (L)1ACh10.0%0.0
CB3308 (L)1ACh10.0%0.0
SMP232 (L)1Glu10.0%0.0
CB2040 (L)1ACh10.0%0.0
CB0937 (L)1Glu10.0%0.0
AOTU056 (L)1GABA10.0%0.0
SMP412 (L)1ACh10.0%0.0
LoVP8 (L)1ACh10.0%0.0
LoVP56 (L)1Glu10.0%0.0
SMP532_a (L)1Glu10.0%0.0
SMP266 (L)1Glu10.0%0.0
CL086_b (L)1ACh10.0%0.0
SLP402_b (L)1Glu10.0%0.0
SMP284_a (L)1Glu10.0%0.0
CB3001 (L)1ACh10.0%0.0
SMP403 (L)1ACh10.0%0.0
MeVP15 (L)1ACh10.0%0.0
SMP413 (L)1ACh10.0%0.0
CB3900 (L)1ACh10.0%0.0
SLP389 (L)1ACh10.0%0.0
PLP174 (L)1ACh10.0%0.0
SMP426 (L)1Glu10.0%0.0
CL136 (L)1ACh10.0%0.0
PAL03 (R)1unc10.0%0.0
LoVP10 (L)1ACh10.0%0.0
CL030 (L)1Glu10.0%0.0
MeVC24 (L)1Glu10.0%0.0
SMP316_b (L)1ACh10.0%0.0
SMP512 (R)1ACh10.0%0.0
SMP345 (L)1Glu10.0%0.0
SMP401 (L)1ACh10.0%0.0
CL225 (R)1ACh10.0%0.0
CL182 (L)1Glu10.0%0.0
LHAV4i1 (L)1GABA10.0%0.0
GNG324 (L)1ACh10.0%0.0
IB022 (L)1ACh10.0%0.0
CL368 (L)1Glu10.0%0.0
SMP047 (L)1Glu10.0%0.0
LHPV1d1 (L)1GABA10.0%0.0
PLP231 (L)1ACh10.0%0.0
LHPV4e1 (L)1Glu10.0%0.0
SLP382 (L)1Glu10.0%0.0
PLP095 (L)1ACh10.0%0.0
MeVP_unclear (L)1Glu10.0%0.0
SLP393 (R)1ACh10.0%0.0
SLP360_b (L)1ACh10.0%0.0
SMP162 (R)1Glu10.0%0.0
SMP340 (L)1ACh10.0%0.0
SLP403 (L)1unc10.0%0.0
CL026 (L)1Glu10.0%0.0
SMP588 (L)1unc10.0%0.0
SLP270 (R)1ACh10.0%0.0
SMPp&v1B_M02 (L)1unc10.0%0.0
LT55 (L)1Glu10.0%0.0
CL086_a (L)1ACh10.0%0.0
SLP411 (L)1Glu10.0%0.0
SMP159 (R)1Glu10.0%0.0
MeVP32 (L)1ACh10.0%0.0
SMP014 (L)1ACh10.0%0.0
aMe9 (L)1ACh10.0%0.0
SMP554 (L)1GABA10.0%0.0
aMe15 (L)1ACh10.0%0.0
SLP304 (L)1unc10.0%0.0
SLP457 (L)1unc10.0%0.0
LHPV5i1 (L)1ACh10.0%0.0
SMP527 (L)1ACh10.0%0.0
SMP583 (L)1Glu10.0%0.0
CL135 (L)1ACh10.0%0.0
MeVPMe11 (R)1Glu10.0%0.0
AVLP571 (L)1ACh10.0%0.0
CL357 (R)1unc10.0%0.0
CL063 (L)1GABA10.0%0.0
AstA1 (R)1GABA10.0%0.0
OA-VPM3 (R)1OA10.0%0.0
LoVCLo3 (R)1OA10.0%0.0
mALD1 (R)1GABA10.0%0.0

Outputs

downstream
partner
#NTconns
SMP200
%
Out
CV
SMP404 (L)2ACh1236.9%0.6
IB007 (L)1GABA935.2%0.0
SMP108 (L)1ACh874.9%0.0
SMP387 (L)1ACh864.9%0.0
SMP176 (L)1ACh784.4%0.0
SMP472 (L)2ACh663.7%0.5
SMP291 (L)1ACh613.4%0.0
SMP470 (L)1ACh563.2%0.0
MBON35 (L)1ACh563.2%0.0
LoVC3 (R)1GABA553.1%0.0
SMP085 (L)2Glu522.9%0.5
SMP090 (L)2Glu522.9%0.3
SMP080 (L)1ACh432.4%0.0
LoVC3 (L)1GABA422.4%0.0
SMP392 (L)2ACh352.0%0.9
SMP175 (L)1ACh321.8%0.0
SMP421 (L)1ACh321.8%0.0
MBON32 (L)1GABA301.7%0.0
SMP416 (L)2ACh301.7%0.6
SMP081 (L)2Glu291.6%0.4
SMP492 (L)1ACh281.6%0.0
SMP084 (L)2Glu271.5%0.3
SMP148 (L)2GABA261.5%0.3
ATL008 (L)1Glu231.3%0.0
SMP516 (L)2ACh231.3%0.1
SMP092 (L)2Glu221.2%0.5
SMP530_a (L)1Glu211.2%0.0
SMP065 (L)2Glu191.1%0.5
IB018 (L)1ACh181.0%0.0
SMP051 (L)1ACh150.8%0.0
SMP052 (L)2ACh150.8%0.3
SMP425 (L)1Glu140.8%0.0
SMP089 (L)2Glu140.8%0.0
SMP157 (L)1ACh130.7%0.0
SMP271 (L)2GABA130.7%0.4
SMP530_b (L)1Glu120.7%0.0
SMP152 (L)1ACh110.6%0.0
oviIN (L)1GABA110.6%0.0
SMP061 (L)2Glu110.6%0.6
aMe24 (L)1Glu100.6%0.0
SMP251 (L)1ACh90.5%0.0
SMP083 (L)2Glu90.5%0.6
CL029_b (L)1Glu80.5%0.0
SMP494 (L)1Glu80.5%0.0
SMP493 (L)1ACh70.4%0.0
IB070 (L)2ACh70.4%0.4
SMP331 (L)5ACh70.4%0.3
PAL03 (L)1unc60.3%0.0
SMP066 (L)2Glu60.3%0.3
SMP069 (L)2Glu60.3%0.0
SMP495_c (L)1Glu50.3%0.0
SMP185 (L)1ACh50.3%0.0
SMP409 (L)1ACh50.3%0.0
aMe24 (R)1Glu50.3%0.0
SMP317 (L)3ACh50.3%0.3
SMP072 (L)1Glu40.2%0.0
SMP275 (L)1Glu40.2%0.0
SMP493 (R)1ACh40.2%0.0
IB110 (L)1Glu40.2%0.0
IB009 (L)1GABA40.2%0.0
VES045 (L)1GABA40.2%0.0
AOTU035 (L)1Glu40.2%0.0
SMP044 (L)1Glu30.2%0.0
CL029_a (L)1Glu30.2%0.0
SMP528 (L)1Glu30.2%0.0
CB3076 (L)1ACh30.2%0.0
SMP251 (R)1ACh30.2%0.0
SMP424 (L)1Glu30.2%0.0
SLP402_a (L)1Glu30.2%0.0
SMP400 (L)1ACh30.2%0.0
SMP249 (L)1Glu30.2%0.0
SMP588 (L)1unc30.2%0.0
SLP443 (L)1Glu30.2%0.0
SMP402 (L)1ACh30.2%0.0
SMP253 (L)1ACh30.2%0.0
SMP272 (L)1ACh30.2%0.0
DNp14 (L)1ACh30.2%0.0
SMP093 (L)2Glu30.2%0.3
SMP410 (L)2ACh30.2%0.3
PS002 (L)2GABA30.2%0.3
SMP162 (L)3Glu30.2%0.0
CRE078 (L)1ACh20.1%0.0
DNp32 (L)1unc20.1%0.0
DNp27 (L)1ACh20.1%0.0
SMP709m (L)1ACh20.1%0.0
SMP589 (L)1unc20.1%0.0
SMP337 (L)1Glu20.1%0.0
SMP729m (L)1Glu20.1%0.0
SMP056 (L)1Glu20.1%0.0
SMP598 (L)1Glu20.1%0.0
ATL008 (R)1Glu20.1%0.0
SMP581 (L)1ACh20.1%0.0
SMP321_b (L)1ACh20.1%0.0
SLP412_a (L)1Glu20.1%0.0
CB0943 (L)1ACh20.1%0.0
SMP284_b (L)1Glu20.1%0.0
SMP091 (L)1GABA20.1%0.0
SMP590_a (R)1unc20.1%0.0
SMP315 (L)1ACh20.1%0.0
SMP068 (L)1Glu20.1%0.0
SMP513 (L)1ACh20.1%0.0
SMP064 (L)1Glu20.1%0.0
SMP162 (R)1Glu20.1%0.0
SMP588 (R)1unc20.1%0.0
SMP390 (L)1ACh20.1%0.0
SMP372 (L)1ACh20.1%0.0
SMP384 (L)1unc20.1%0.0
SMP471 (L)1ACh20.1%0.0
SMP744 (L)1ACh20.1%0.0
SMP014 (L)1ACh20.1%0.0
M_spPN4t9 (L)1ACh20.1%0.0
5-HTPMPV01 (R)15-HT20.1%0.0
SMP520 (L)2ACh20.1%0.0
SMP413 (L)2ACh20.1%0.0
SMP414 (L)2ACh20.1%0.0
SMP151 (L)1GABA10.1%0.0
PLP130 (L)1ACh10.1%0.0
SMP595 (L)1Glu10.1%0.0
SMPp&v1B_M02 (R)1unc10.1%0.0
SMP469 (L)1ACh10.1%0.0
CL179 (L)1Glu10.1%0.0
SMP280 (L)1Glu10.1%0.0
SIP034 (L)1Glu10.1%0.0
SMP428_a (L)1ACh10.1%0.0
SMP319 (L)1ACh10.1%0.0
SMP407 (L)1ACh10.1%0.0
SMP314 (L)1ACh10.1%0.0
SMP520 (R)1ACh10.1%0.0
SLP402_b (L)1Glu10.1%0.0
SMP403 (L)1ACh10.1%0.0
SMP087 (L)1Glu10.1%0.0
SMP444 (L)1Glu10.1%0.0
SLP442 (L)1ACh10.1%0.0
CB2411 (L)1Glu10.1%0.0
CB2720 (L)1ACh10.1%0.0
CL244 (L)1ACh10.1%0.0
SMP086 (L)1Glu10.1%0.0
CB1803 (L)1ACh10.1%0.0
SMP313 (L)1ACh10.1%0.0
SMP401 (L)1ACh10.1%0.0
LHPV10a1b (L)1ACh10.1%0.0
aMe1 (L)1GABA10.1%0.0
SMP531 (L)1Glu10.1%0.0
SMP513 (R)1ACh10.1%0.0
SMP153_a (L)1ACh10.1%0.0
SMP201 (L)1Glu10.1%0.0
GNG540 (R)15-HT10.1%0.0
aMe3 (L)1Glu10.1%0.0
PAL01 (R)1unc10.1%0.0
SMP527 (L)1ACh10.1%0.0
SMP583 (L)1Glu10.1%0.0
DNd05 (L)1ACh10.1%0.0
AstA1 (L)1GABA10.1%0.0