Male CNS – Cell Type Explorer

SApp21(R)

3
Neurons
Right: 2 | Left: 1
log ratio : -1.00
1,359
Synapses
Post: 713 | Pre: 646
log ratio : -0.14
2,014
Connections
Upstream: 638 | Downstream: 1,376
log ratio : 1.11
ACh (87.7% CL)
Neurotransmitter
679.5
Synapses per Neuron
Post: 356.5 | Pre: 323
log ratio : -0.14
1,007
Connections per Neuron
Upstream: 319 | Downstream: 688
log ratio : 1.11

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)33747.3%-0.2528343.8%
GNG28840.4%-0.2823736.7%
ADMN(R)405.6%-1.07192.9%
IntTct101.4%2.00406.2%
SAD233.2%-0.28192.9%
NTct(UTct-T1)(R)20.3%3.70264.0%
HTct(UTct-T3)(R)40.6%2.32203.1%
CV-unspecified71.0%-inf00.0%
CentralBrain-unspecified20.3%-1.0010.2%
DMetaN(R)00.0%inf10.2%

Connectivity

Inputs

upstream
partner
#NTconns
SApp21
%
In
CV
IN06A044 (L)3GABA8627.0%0.3
AN06B037 (L)1GABA6921.6%0.0
IPS001 (R)4GABA29.59.2%0.9
IN06A023 (L)1GABA28.58.9%0.0
IN06A023 (R)1GABA278.5%0.0
GNG302 (L)1GABA216.6%0.0
SApp212ACh72.2%0.0
DNge152 (M)1unc61.9%0.0
SApp11,SApp182ACh4.51.4%0.3
AN06B037 (R)1GABA2.50.8%0.0
AN07B004 (R)1ACh2.50.8%0.0
SApp103ACh2.50.8%0.6
SApp193ACh2.50.8%0.3
AN06B046 (L)1GABA20.6%0.0
IN06A072 (L)3GABA20.6%0.4
CB2792 (R)2GABA20.6%0.0
PS117_b (R)1Glu1.50.5%0.0
SApp201ACh1.50.5%0.0
SApp131ACh1.50.5%0.0
IN12A012 (R)1GABA1.50.5%0.0
GNG648 (R)1unc1.50.5%0.0
IN06A128 (L)1GABA10.3%0.0
IN07B047 (R)1ACh10.3%0.0
GNG422 (R)1GABA10.3%0.0
IN19A056 (R)1GABA10.3%0.0
IN06B076 (L)1GABA10.3%0.0
PS241 (R)1ACh10.3%0.0
IN17B017 (R)1GABA10.3%0.0
IN06A070 (L)1GABA0.50.2%0.0
IN16B092 (R)1Glu0.50.2%0.0
IN19A043 (R)1GABA0.50.2%0.0
IN12A059_d (L)1ACh0.50.2%0.0
IN27X007 (L)1unc0.50.2%0.0
IN17B004 (R)1GABA0.50.2%0.0
DNg76 (L)1ACh0.50.2%0.0
AN07B041 (L)1ACh0.50.2%0.0
AN07B004 (L)1ACh0.50.2%0.0
ADNM1 MN (L)1unc0.50.2%0.0
IN03B069 (R)1GABA0.50.2%0.0
IN12A061_c (R)1ACh0.50.2%0.0
IN12A059_a (R)1ACh0.50.2%0.0
GNG619 (R)1Glu0.50.2%0.0
ANXXX171 (R)1ACh0.50.2%0.0
SApp141ACh0.50.2%0.0
DNg07 (L)1ACh0.50.2%0.0
GNG544 (R)1ACh0.50.2%0.0
DNge107 (R)1GABA0.50.2%0.0
5-HTPMPV03 (L)15-HT0.50.2%0.0

Outputs

downstream
partner
#NTconns
SApp21
%
Out
CV
IN17B004 (R)2GABA44.56.5%0.5
b3 MN (R)1Glu41.56.0%0.0
GNG636 (R)2GABA33.54.9%0.3
GNG126 (R)1GABA31.54.6%0.0
DNge107 (R)1GABA22.53.3%0.0
PS117_b (R)1Glu21.53.1%0.0
i1 MN (R)1Glu19.52.8%0.0
IN02A042 (R)2Glu162.3%0.3
GNG126 (L)1GABA162.3%0.0
ADNM1 MN (L)1unc15.52.3%0.0
IN02A037 (R)1Glu14.52.1%0.0
GNG634 (R)3GABA142.0%0.7
GNG647 (R)2unc142.0%0.6
DNae003 (R)1ACh121.7%0.0
DNge107 (L)1GABA11.51.7%0.0
CB0214 (R)1GABA111.6%0.0
IN02A040 (R)2Glu111.6%0.5
IN13A013 (R)1GABA10.51.5%0.0
IN06A044 (L)3GABA10.51.5%0.2
IN06A075 (R)4GABA10.51.5%0.5
GNG430_a (R)1ACh91.3%0.0
IN03B069 (R)3GABA91.3%0.3
PS115 (R)1Glu8.51.2%0.0
IN06A023 (L)1GABA71.0%0.0
GNG648 (R)1unc71.0%0.0
SApp212ACh71.0%0.0
MNnm11 (R)1Glu6.50.9%0.0
IN17B001 (R)1GABA6.50.9%0.0
GNG430_b (R)1ACh6.50.9%0.0
IN06A002 (R)1GABA6.50.9%0.0
IN16B087 (R)1Glu60.9%0.0
IN08B051_d (R)1ACh60.9%0.0
SApp192ACh60.9%0.5
DNg76 (L)1ACh5.50.8%0.0
DNa10 (R)1ACh5.50.8%0.0
CB0122 (R)1ACh50.7%0.0
i2 MN (R)1Glu50.7%0.0
DNg76 (R)1ACh50.7%0.0
IN08A011 (R)1Glu50.7%0.0
GNG144 (R)1GABA4.50.7%0.0
GNG267 (R)1ACh4.50.7%0.0
IN06A023 (R)1GABA40.6%0.0
PS117_a (R)1Glu40.6%0.0
PLP178 (R)1Glu40.6%0.0
MNnm13 (R)1Glu40.6%0.0
IN06A077 (R)2GABA40.6%0.5
MNhm03 (R)1Glu40.6%0.0
CB1601 (R)3GABA40.6%0.6
IN06A044 (R)3GABA40.6%0.2
SApp106ACh40.6%0.4
GNG652 (R)1unc3.50.5%0.0
IN07B030 (L)1Glu3.50.5%0.0
SApp201ACh3.50.5%0.0
IN03B005 (R)1unc3.50.5%0.0
CL121_a (R)2GABA3.50.5%0.4
DNge071 (R)1GABA30.4%0.0
IN06A002 (L)1GABA30.4%0.0
SApp11,SApp183ACh30.4%0.4
IN16B066 (R)1Glu2.50.4%0.0
IN06A078 (R)1GABA2.50.4%0.0
IN06A067_c (R)1GABA2.50.4%0.0
PS148 (R)1Glu2.50.4%0.0
IN07B087 (L)2ACh2.50.4%0.2
GNG283 (R)1unc2.50.4%0.0
IN03B084 (R)3GABA2.50.4%0.3
IN07B087 (R)3ACh2.50.4%0.3
AN06B037 (L)1GABA20.3%0.0
IN03B067 (R)1GABA20.3%0.0
IN07B079 (L)1ACh20.3%0.0
IN19B088 (R)1ACh20.3%0.0
MNhm43 (R)1Glu20.3%0.0
IN06A103 (L)1GABA20.3%0.0
IN07B075 (L)2ACh20.3%0.5
GNG635 (R)2GABA20.3%0.5
IN06B066 (L)2GABA20.3%0.5
IN11B024_a (R)1GABA1.50.2%0.0
GNG302 (L)1GABA1.50.2%0.0
IN06A061 (R)1GABA1.50.2%0.0
IN07B038 (R)1ACh1.50.2%0.0
IN06A008 (R)1GABA1.50.2%0.0
IN07B030 (R)1Glu1.50.2%0.0
IN06B014 (L)1GABA1.50.2%0.0
CB4247 (R)1GABA1.50.2%0.0
AMMC015 (R)1GABA1.50.2%0.0
AN19B060 (L)1ACh1.50.2%0.0
IPS001 (R)1GABA1.50.2%0.0
IN06A076_a (R)1GABA1.50.2%0.0
IN12A061_a (R)1ACh1.50.2%0.0
IN12A006 (R)1ACh1.50.2%0.0
WED161 (R)1ACh1.50.2%0.0
DNge152 (M)1unc1.50.2%0.0
IN07B102 (R)1ACh10.1%0.0
IN12A063_b (R)1ACh10.1%0.0
IN16B099 (R)1Glu10.1%0.0
IN06A003 (R)1GABA10.1%0.0
DNge179 (R)1GABA10.1%0.0
AN06B014 (L)1GABA10.1%0.0
AN07B004 (R)1ACh10.1%0.0
IN19A056 (R)1GABA10.1%0.0
IN03B070 (R)1GABA10.1%0.0
IN06A090 (R)1GABA10.1%0.0
IN12A059_a (L)1ACh10.1%0.0
IN07B038 (L)1ACh10.1%0.0
hg4 MN (R)1unc10.1%0.0
MNhm42 (R)1Glu10.1%0.0
AN27X009 (R)1ACh10.1%0.0
GNG492 (R)1GABA10.1%0.0
IN06A071 (R)1GABA10.1%0.0
IN12A043_d (L)2ACh10.1%0.0
IN06A003 (L)1GABA10.1%0.0
PS116 (L)1Glu10.1%0.0
IN07B081 (L)1ACh0.50.1%0.0
DVMn 3a, b (R)1unc0.50.1%0.0
IN06A072 (L)1GABA0.50.1%0.0
IN11B022_a (R)1GABA0.50.1%0.0
IN11B022_e (R)1GABA0.50.1%0.0
IN12A043_b (L)1ACh0.50.1%0.0
IN03B076 (R)1GABA0.50.1%0.0
IN06B069 (L)1GABA0.50.1%0.0
IN08A011 (L)1Glu0.50.1%0.0
IN06A019 (R)1GABA0.50.1%0.0
IN11B024_b (R)1GABA0.50.1%0.0
IN03B046 (R)1GABA0.50.1%0.0
CB0982 (R)1GABA0.50.1%0.0
DNg06 (L)1ACh0.50.1%0.0
GNG332 (R)1GABA0.50.1%0.0
WED159 (R)1ACh0.50.1%0.0
GNG428 (R)1Glu0.50.1%0.0
SApp041ACh0.50.1%0.0
CB4094 (R)1ACh0.50.1%0.0
DNge108 (R)1ACh0.50.1%0.0
CB1918 (R)1GABA0.50.1%0.0
GNG440 (R)1GABA0.50.1%0.0
PS221 (R)1ACh0.50.1%0.0
GNG251 (L)1Glu0.50.1%0.0
PS116 (R)1Glu0.50.1%0.0
DNae009 (R)1ACh0.50.1%0.0
AN07B004 (L)1ACh0.50.1%0.0
AN03B050 (R)1GABA0.50.1%0.0
IN02A061 (R)1Glu0.50.1%0.0
IN12A043_b (R)1ACh0.50.1%0.0
IN02A049 (R)1Glu0.50.1%0.0
IN19A043 (R)1GABA0.50.1%0.0
IN12A046_b (R)1ACh0.50.1%0.0
IN12A061_c (R)1ACh0.50.1%0.0
IN02A047 (R)1Glu0.50.1%0.0
IN07B077 (R)1ACh0.50.1%0.0
IN06A103 (R)1GABA0.50.1%0.0
IN07B067 (L)1ACh0.50.1%0.0
IN07B047 (R)1ACh0.50.1%0.0
INXXX146 (R)1GABA0.50.1%0.0
IN27X007 (L)1unc0.50.1%0.0
SNpp301ACh0.50.1%0.0
IN13A013 (L)1GABA0.50.1%0.0
AMMC032 (R)1GABA0.50.1%0.0
AN05B096 (R)1ACh0.50.1%0.0
AN07B069_b (L)1ACh0.50.1%0.0
AN07B069_a (L)1ACh0.50.1%0.0
SApp131ACh0.50.1%0.0
AN19B046 (L)1ACh0.50.1%0.0
CB2944 (R)1GABA0.50.1%0.0
AN07B101_c (L)1ACh0.50.1%0.0
WED162 (R)1ACh0.50.1%0.0
CB3953 (R)1ACh0.50.1%0.0
CB2246 (R)1ACh0.50.1%0.0
DNg08 (R)1GABA0.50.1%0.0
GNG658 (R)1ACh0.50.1%0.0
IB045 (R)1ACh0.50.1%0.0
PS117_a (L)1Glu0.50.1%0.0
GNG308 (R)1Glu0.50.1%0.0
GNG653 (R)1unc0.50.1%0.0
PS089 (L)1GABA0.50.1%0.0