Male CNS – Cell Type Explorer

SApp21(L)

3
Neurons
Right: 2 | Left: 1
log ratio : -1.00
602
Synapses
Post: 335 | Pre: 267
log ratio : -0.33
918
Connections
Upstream: 318 | Downstream: 600
log ratio : 0.92
ACh (87.7% CL)
Neurotransmitter
602
Synapses per Neuron
Post: 335 | Pre: 267
log ratio : -0.33
918
Connections per Neuron
Upstream: 318 | Downstream: 600
log ratio : 0.92

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)16148.1%-0.5011442.7%
GNG14342.7%-0.4310639.7%
SAD195.7%-0.79114.1%
IntTct00.0%inf197.1%
NTct(UTct-T1)(L)00.0%inf124.5%
ADMN(L)61.8%-1.5820.7%
CV-unspecified61.8%-2.5810.4%
VNC-unspecified00.0%inf20.7%

Connectivity

Inputs

upstream
partner
#NTconns
SApp21
%
In
CV
IN06A044 (R)4GABA8827.7%0.3
AN06B037 (R)1GABA6319.8%0.0
IPS001 (L)3GABA4413.8%0.7
IN06A023 (L)1GABA299.1%0.0
IN06A023 (R)1GABA247.5%0.0
GNG302 (R)1GABA226.9%0.0
SApp193ACh123.8%0.7
DNge152 (M)1unc61.9%0.0
SApp103ACh51.6%0.3
SApp11,SApp183ACh41.3%0.4
IN06B017 (R)1GABA30.9%0.0
CB2792 (L)1GABA30.9%0.0
IN06B036 (R)1GABA20.6%0.0
SApp201ACh20.6%0.0
IN06A072 (R)2GABA20.6%0.0
IN19A043 (L)1GABA10.3%0.0
IN12A043_d (L)1ACh10.3%0.0
SNpp071ACh10.3%0.0
SNpp081ACh10.3%0.0
IN17B017 (L)1GABA10.3%0.0
IN06A003 (L)1GABA10.3%0.0
AN06B046 (R)1GABA10.3%0.0
GNG617 (R)1Glu10.3%0.0
AN07B004 (L)1ACh10.3%0.0

Outputs

downstream
partner
#NTconns
SApp21
%
Out
CV
GNG636 (L)2GABA599.8%0.1
b3 MN (L)1Glu488.0%0.0
IN17B004 (L)1GABA457.5%0.0
GNG126 (L)1GABA305.0%0.0
i1 MN (L)1Glu254.2%0.0
ADNM1 MN (R)1unc244.0%0.0
IN02A040 (L)2Glu203.3%0.4
DNge107 (L)1GABA183.0%0.0
IN06A075 (L)5GABA172.8%0.4
GNG647 (L)1unc162.7%0.0
GNG430_a (L)1ACh132.2%0.0
GNG267 (L)1ACh132.2%0.0
IN03B069 (L)3GABA122.0%0.6
IN06A002 (L)1GABA111.8%0.0
CB0214 (L)1GABA111.8%0.0
GNG652 (L)1unc101.7%0.0
GNG126 (R)1GABA101.7%0.0
DNae003 (L)1ACh101.7%0.0
IN06A044 (R)4GABA81.3%0.4
GNG332 (L)4GABA81.3%0.5
IN06A076_a (L)1GABA71.2%0.0
IN13A013 (R)1GABA71.2%0.0
IPS001 (L)2GABA71.2%0.4
IN02A037 (L)1Glu61.0%0.0
MNnm13 (L)1Glu61.0%0.0
IN13A013 (L)1GABA61.0%0.0
DNa10 (L)1ACh61.0%0.0
PS117_b (R)1Glu61.0%0.0
PS221 (L)2ACh61.0%0.3
IN06A070 (L)1GABA50.8%0.0
MNnm11 (L)1Glu50.8%0.0
IN08A011 (L)1Glu50.8%0.0
i2 MN (L)1Glu50.8%0.0
PS117_b (L)1Glu50.8%0.0
CB0122 (L)1ACh50.8%0.0
DNg76 (R)1ACh50.8%0.0
SApp103ACh50.8%0.6
DNge152 (M)1unc40.7%0.0
DNge107 (R)1GABA40.7%0.0
CB4094 (L)2ACh40.7%0.0
SApp193ACh40.7%0.4
hg4 MN (L)1unc30.5%0.0
PS359 (L)1ACh30.5%0.0
SApp201ACh30.5%0.0
AMMC015 (L)1GABA30.5%0.0
AN06B014 (R)1GABA30.5%0.0
IN06B066 (R)2GABA30.5%0.3
IN06A044 (L)2GABA30.5%0.3
IN02A049 (L)1Glu20.3%0.0
IN03B090 (L)1GABA20.3%0.0
IN12A061_c (L)1ACh20.3%0.0
MNhm03 (L)1Glu20.3%0.0
DVMn 1a-c (L)1Glu20.3%0.0
DNge071 (L)1GABA20.3%0.0
DNg76 (L)1ACh20.3%0.0
SApp041ACh20.3%0.0
CB1541 (L)1ACh20.3%0.0
GNG283 (L)1unc20.3%0.0
GNG302 (R)1GABA20.3%0.0
GNG648 (L)1unc20.3%0.0
SApp11,SApp182ACh20.3%0.0
IN16B062 (L)1Glu10.2%0.0
IN06A023 (R)1GABA10.2%0.0
IN03B090 (R)1GABA10.2%0.0
IN06A002 (R)1GABA10.2%0.0
IN12A043_d (L)1ACh10.2%0.0
IN17A102 (L)1ACh10.2%0.0
IN12A054 (L)1ACh10.2%0.0
SNpp081ACh10.2%0.0
IN19B043 (L)1ACh10.2%0.0
IN12A043_a (L)1ACh10.2%0.0
IN06A003 (R)1GABA10.2%0.0
IN06A003 (L)1GABA10.2%0.0
MNhm43 (L)1Glu10.2%0.0
IN19B023 (L)1ACh10.2%0.0
IN19B023 (R)1ACh10.2%0.0
GNG598 (L)1GABA10.2%0.0
GNG506 (L)1GABA10.2%0.0
CB3953 (L)1ACh10.2%0.0
AN07B060 (R)1ACh10.2%0.0
GNG635 (L)1GABA10.2%0.0
GNG617 (R)1Glu10.2%0.0
GNG440 (L)1GABA10.2%0.0
GNG619 (L)1Glu10.2%0.0
CB1464 (L)1ACh10.2%0.0
DNge108 (L)1ACh10.2%0.0
AMMC020 (L)1GABA10.2%0.0
DNge183 (R)1ACh10.2%0.0
GNG251 (R)1Glu10.2%0.0
AN06B037 (R)1GABA10.2%0.0
CB0982 (L)1GABA10.2%0.0
PS115 (L)1Glu10.2%0.0
PS116 (R)1Glu10.2%0.0