Male CNS – Cell Type Explorer

SApp13(L)

8
Total Neurons
Right: 4 | Left: 4
log ratio : 0.00
2,516
Total Synapses
Post: 433 | Pre: 2,083
log ratio : 2.27
629
Mean Synapses
Post: 108.2 | Pre: 520.8
log ratio : 2.27
ACh(97.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (12 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)16037.0%2.3782639.7%
GNG13130.3%1.9550524.2%
Ov(L)4510.4%2.7129414.1%
VNC-unspecified358.1%2.6321610.4%
HTct(UTct-T3)(L)245.5%2.421286.1%
IntTct184.2%2.32904.3%
CentralBrain-unspecified61.4%1.12130.6%
NTct(UTct-T1)(L)00.0%inf110.5%
CV-unspecified81.8%-inf00.0%
WED(L)30.7%-inf00.0%
ADMN(L)20.5%-inf00.0%
SAD10.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
SApp13
%
In
CV
IN03B070 (L)3GABA10.211.2%0.5
SApp134ACh8.59.3%0.3
IN19A057 (L)1GABA6.57.1%0.0
IN03B038 (L)1GABA6.57.1%0.0
5-HTPMPV03 (R)15-HT66.5%0.0
5-HTPMPV03 (L)15-HT4.85.2%0.0
SApp143ACh2.83.0%0.3
IN06A012 (R)1GABA2.52.7%0.0
SNpp113ACh2.52.7%0.5
DNge152 (M)1unc2.22.5%0.0
SApp043ACh22.2%0.5
CB2235 (L)1GABA1.81.9%0.0
SApp106ACh1.81.9%0.3
IN19A056 (L)1GABA1.51.6%0.0
SNpp074ACh1.51.6%0.3
IN05B016 (R)2GABA1.21.4%0.2
SApp11,SApp182ACh1.21.4%0.6
IN05B016 (L)1GABA11.1%0.0
WED070 (L)1unc11.1%0.0
EAXXX079 (R)1unc11.1%0.0
GNG598 (L)2GABA11.1%0.0
GNG634 (L)1GABA0.80.8%0.0
IN06A104 (R)1GABA0.80.8%0.0
IN16B092 (L)1Glu0.80.8%0.0
PS089 (L)1GABA0.80.8%0.0
IN17A106_b (L)1ACh0.80.8%0.0
IN06A012 (L)1GABA0.80.8%0.0
IN03B080 (L)2GABA0.80.8%0.3
IN19A049 (L)1GABA0.80.8%0.0
SNpp333ACh0.80.8%0.0
CB2792 (L)3GABA0.80.8%0.0
IN17A048 (L)1ACh0.50.5%0.0
IN19A043 (L)1GABA0.50.5%0.0
IN06A002 (L)1GABA0.50.5%0.0
IN02A007 (L)1Glu0.50.5%0.0
AN27X008 (L)1HA0.50.5%0.0
DNge093 (R)1ACh0.50.5%0.0
IN06B081 (R)1GABA0.50.5%0.0
IN11B021_e (L)1GABA0.50.5%0.0
SNpp041ACh0.50.5%0.0
AN06B031 (R)1GABA0.50.5%0.0
IN16B063 (L)2Glu0.50.5%0.0
IN17A112 (L)1ACh0.50.5%0.0
SApp19,SApp211ACh0.50.5%0.0
IN16B069 (L)2Glu0.50.5%0.0
EAXXX079 (L)1unc0.50.5%0.0
AN10B017 (R)1ACh0.50.5%0.0
IN11B018 (L)1GABA0.20.3%0.0
IN12A063_a (L)1ACh0.20.3%0.0
IN03B060 (L)1GABA0.20.3%0.0
IN06A099 (R)1GABA0.20.3%0.0
IN11B019 (L)1GABA0.20.3%0.0
IN17A106_a (L)1ACh0.20.3%0.0
IN19B053 (R)1ACh0.20.3%0.0
IN17B015 (L)1GABA0.20.3%0.0
IN27X007 (R)1unc0.20.3%0.0
IN05B028 (R)1GABA0.20.3%0.0
IN16B062 (L)1Glu0.20.3%0.0
IN16B079 (L)1Glu0.20.3%0.0
IN06A044 (R)1GABA0.20.3%0.0
IN17A107 (L)1ACh0.20.3%0.0
IN06A037 (R)1GABA0.20.3%0.0
IN07B083_d (R)1ACh0.20.3%0.0
IN07B075 (L)1ACh0.20.3%0.0
IN10B023 (R)1ACh0.20.3%0.0
IN13B008 (R)1GABA0.20.3%0.0
AN07B049 (R)1ACh0.20.3%0.0
GNG619 (R)1Glu0.20.3%0.0
DNge092 (R)1ACh0.20.3%0.0
GNG652 (L)1unc0.20.3%0.0
DNge084 (L)1GABA0.20.3%0.0
PS089 (R)1GABA0.20.3%0.0
IN02A062 (L)1Glu0.20.3%0.0
IN06A045 (L)1GABA0.20.3%0.0
GNG617 (R)1Glu0.20.3%0.0
CB0607 (L)1GABA0.20.3%0.0
IN17A078 (L)1ACh0.20.3%0.0
IN07B096_a (L)1ACh0.20.3%0.0
IN07B083_c (R)1ACh0.20.3%0.0
IN17A049 (L)1ACh0.20.3%0.0
IN06B042 (R)1GABA0.20.3%0.0
IN05B010 (R)1GABA0.20.3%0.0

Outputs

downstream
partner
#NTconns
SApp13
%
Out
CV
tpn MN (L)1unc62.85.5%0.0
IN17A106_b (L)1ACh49.54.3%0.0
IN17A107 (L)1ACh47.84.2%0.0
IN16B062 (L)2Glu45.54.0%0.1
IN17A112 (L)1ACh35.53.1%0.0
IN16B069 (L)3Glu332.9%0.2
IN17A106_a (L)1ACh32.52.8%0.0
IN16B092 (L)2Glu27.52.4%0.8
IN19B031 (L)1ACh25.52.2%0.0
IN07B096_b (L)3ACh24.22.1%0.4
IN05B028 (R)2GABA22.82.0%0.8
iii3 MN (L)1unc21.51.9%0.0
IN10B023 (R)1ACh21.21.8%0.0
IN17A060 (L)1Glu211.8%0.0
AN17A003 (L)1ACh20.81.8%0.0
AMMC035 (L)1GABA17.51.5%0.0
DNg08 (L)9GABA17.21.5%0.8
IN06B042 (R)2GABA16.81.5%0.9
IN16B063 (L)2Glu141.2%0.6
GNG636 (L)2GABA141.2%0.1
INXXX044 (L)3GABA13.81.2%1.2
IN05B028 (L)1GABA13.81.2%0.0
CB0598 (L)1GABA13.21.2%0.0
MeVC11 (R)1ACh131.1%0.0
IN17A049 (L)3ACh131.1%0.6
GNG646 (L)3Glu131.1%0.3
IN16B066 (L)1Glu121.0%0.0
IN06B063 (L)4GABA121.0%0.5
IN08B003 (L)1GABA11.51.0%0.0
IN17A095 (L)1ACh10.80.9%0.0
CB2792 (L)4GABA100.9%0.9
IN06A012 (L)1GABA9.80.8%0.0
MeVC11 (L)1ACh90.8%0.0
IN07B083_d (L)1ACh90.8%0.0
SApp134ACh8.50.7%0.1
IN11B021_b (L)3GABA8.20.7%0.4
IN07B079 (L)3ACh8.20.7%0.4
IN05B010 (R)1GABA80.7%0.0
IN01A017 (R)1ACh7.80.7%0.0
IN06A033 (L)2GABA7.80.7%0.3
IN11B019 (L)3GABA7.80.7%0.6
AN05B009 (R)1GABA7.50.7%0.0
IN16B059 (L)2Glu7.50.7%0.5
IN06A021 (L)1GABA6.80.6%0.0
IN06B085 (R)3GABA6.80.6%0.4
IN03B084 (L)2GABA6.80.6%0.1
GNG598 (L)2GABA60.5%0.2
AVLP120 (L)2ACh5.80.5%0.6
AN17A004 (L)1ACh5.80.5%0.0
IN17A093 (L)2ACh5.50.5%0.6
INXXX266 (L)1ACh5.50.5%0.0
IN06B069 (R)4GABA5.50.5%0.7
GNG422 (L)2GABA5.20.5%0.9
IN17A033 (L)1ACh4.80.4%0.0
CB0517 (L)1Glu4.80.4%0.0
AMMC015 (L)3GABA4.80.4%0.1
IN03B067 (L)2GABA4.50.4%0.2
IN03B070 (L)3GABA4.50.4%0.5
IN17A088, IN17A089 (L)2ACh4.20.4%0.9
DNge084 (L)1GABA4.20.4%0.0
IN07B075 (L)1ACh4.20.4%0.0
IN06B003 (L)1GABA40.3%0.0
IN16B099 (L)3Glu40.3%1.1
PS241 (L)2ACh40.3%0.6
IN03B080 (L)3GABA40.3%0.6
hg3 MN (L)1GABA40.3%0.0
IN06B066 (R)6GABA40.3%0.7
IN19B045 (L)2ACh3.80.3%0.3
SApp143ACh3.80.3%0.4
GNG454 (L)4Glu3.80.3%0.6
PS047_a (L)1ACh3.50.3%0.0
WED182 (L)1ACh3.50.3%0.0
IN11B021_a (L)1GABA3.50.3%0.0
CB0607 (L)1GABA3.50.3%0.0
WED203 (L)1GABA3.50.3%0.0
IN13B008 (R)1GABA3.50.3%0.0
IN16B111 (L)2Glu3.50.3%0.7
IN03B072 (L)2GABA3.20.3%0.4
IN17A085 (L)1ACh3.20.3%0.0
IN07B038 (L)2ACh3.20.3%0.4
IN03B038 (L)1GABA30.3%0.0
IN19B041 (L)1ACh30.3%0.0
GNG530 (L)1GABA30.3%0.0
IN11B021_e (L)2GABA30.3%0.8
IN06A086 (L)2GABA2.80.2%0.8
IN19B066 (L)3ACh2.80.2%0.6
IN06B013 (R)1GABA2.50.2%0.0
CB0324 (L)1ACh2.50.2%0.0
IN17B004 (L)1GABA2.50.2%0.0
ANXXX027 (R)2ACh2.50.2%0.2
AN23B001 (L)1ACh2.20.2%0.0
IN07B039 (R)2ACh2.20.2%0.6
ps1 MN (L)1unc2.20.2%0.0
PS327 (L)1ACh2.20.2%0.0
IN19A056 (L)2GABA2.20.2%0.8
SNpp112ACh2.20.2%0.1
CB2270 (L)2ACh20.2%0.8
IN19A057 (L)1GABA20.2%0.0
IN16B087 (L)1Glu20.2%0.0
5-HTPMPV03 (R)15-HT20.2%0.0
GNG492 (L)1GABA20.2%0.0
AMMC024 (L)1GABA20.2%0.0
GNG652 (L)1unc20.2%0.0
MNwm36 (L)1unc20.2%0.0
IN00A056 (M)3GABA20.2%0.6
IN06A067_e (L)1GABA1.80.2%0.0
IN00A057 (M)3GABA1.80.2%0.5
IN07B096_d (L)1ACh1.50.1%0.0
IN07B090 (L)2ACh1.50.1%0.7
DNge152 (M)1unc1.50.1%0.0
IN17B003 (L)1GABA1.50.1%0.0
DNg07 (L)1ACh1.50.1%0.0
DNge179 (L)1GABA1.50.1%0.0
IN11B021_c (L)2GABA1.50.1%0.7
IN19A049 (L)1GABA1.50.1%0.0
IN06A013 (L)1GABA1.50.1%0.0
AN17B016 (R)1GABA1.20.1%0.0
WED165 (L)1ACh1.20.1%0.0
SNpp041ACh1.20.1%0.0
IN03A011 (L)1ACh1.20.1%0.0
IN06A036 (R)1GABA1.20.1%0.0
IN03B091 (L)1GABA1.20.1%0.0
AN19B032 (R)1ACh1.20.1%0.0
IN07B083_d (R)1ACh1.20.1%0.0
IN03B001 (L)1ACh1.20.1%0.0
AN10B008 (R)1ACh1.20.1%0.0
PS089 (R)1GABA1.20.1%0.0
IN07B100 (L)2ACh1.20.1%0.2
AN19B060 (L)2ACh1.20.1%0.2
IN05B016 (L)1GABA1.20.1%0.0
AN06A112 (L)1GABA1.20.1%0.0
AN17B016 (L)1GABA1.20.1%0.0
SApp104ACh1.20.1%0.3
PS148 (L)1Glu10.1%0.0
AN10B017 (L)1ACh10.1%0.0
IN11A025 (L)1ACh10.1%0.0
IN17A043, IN17A046 (L)1ACh10.1%0.0
INXXX201 (R)1ACh10.1%0.0
AN09B013 (R)1ACh10.1%0.0
IN03B052 (L)1GABA10.1%0.0
GNG648 (L)1unc10.1%0.0
GNG126 (R)1GABA10.1%0.0
IN16B072 (L)1Glu10.1%0.0
CB1496 (L)1GABA10.1%0.0
IN19B081 (R)2ACh10.1%0.0
IN16B089 (L)2Glu10.1%0.0
IN06B074 (R)2GABA10.1%0.5
SAD200m (L)2GABA10.1%0.5
CB0214 (L)1GABA10.1%0.0
SNpp073ACh10.1%0.4
IN07B083_c (L)1ACh0.80.1%0.0
IN19B090 (R)1ACh0.80.1%0.0
GNG161 (L)1GABA0.80.1%0.0
GNG536 (L)1ACh0.80.1%0.0
IN06A099 (L)1GABA0.80.1%0.0
CB2093 (L)1ACh0.80.1%0.0
IN17A067 (L)1ACh0.80.1%0.0
IN06A012 (R)1GABA0.80.1%0.0
IN19B023 (R)1ACh0.80.1%0.0
CB2235 (L)1GABA0.80.1%0.0
CB3743 (L)1GABA0.80.1%0.0
CB1030 (L)1ACh0.80.1%0.0
DNg79 (L)1ACh0.80.1%0.0
AMMC021 (L)1GABA0.80.1%0.0
IN13A022 (L)1GABA0.80.1%0.0
iii1 MN (L)1unc0.80.1%0.0
IN06A002 (L)1GABA0.80.1%0.0
CB1601 (L)1GABA0.80.1%0.0
INXXX011 (L)1ACh0.80.1%0.0
IN02A007 (L)1Glu0.80.1%0.0
GNG635 (L)2GABA0.80.1%0.3
AN06B090 (R)1GABA0.80.1%0.0
IN11B018 (L)2GABA0.80.1%0.3
IN17B015 (L)1GABA0.80.1%0.0
AN06B031 (R)1GABA0.80.1%0.0
GNG634 (L)2GABA0.80.1%0.3
SApp042ACh0.80.1%0.3
PS089 (L)1GABA0.80.1%0.0
hg4 MN (L)1unc0.80.1%0.0
IN19B057 (L)1ACh0.50.0%0.0
tp1 MN (L)1unc0.50.0%0.0
INXXX038 (L)1ACh0.50.0%0.0
WEDPN9 (L)1ACh0.50.0%0.0
AN09B007 (R)1ACh0.50.0%0.0
OCG06 (L)1ACh0.50.0%0.0
GNG126 (L)1GABA0.50.0%0.0
IN19B071 (L)1ACh0.50.0%0.0
AMMC031 (L)1GABA0.50.0%0.0
AN07B089 (L)1ACh0.50.0%0.0
DNge097 (R)1Glu0.50.0%0.0
IN06A032 (L)1GABA0.50.0%0.0
SNpp361ACh0.50.0%0.0
IN19B086 (L)1ACh0.50.0%0.0
IN19B041 (R)1ACh0.50.0%0.0
MNnm08 (L)1unc0.50.0%0.0
ANXXX108 (R)1GABA0.50.0%0.0
PLP122_b (L)1ACh0.50.0%0.0
CB1356 (L)1ACh0.50.0%0.0
CB3784 (L)1GABA0.50.0%0.0
CB2227 (L)1ACh0.50.0%0.0
CB0374 (L)1Glu0.50.0%0.0
DNge030 (L)1ACh0.50.0%0.0
IN00A022 (M)1GABA0.50.0%0.0
IN06B078 (L)1GABA0.50.0%0.0
IN02A042 (L)1Glu0.50.0%0.0
IN07B075 (R)1ACh0.50.0%0.0
IN11B013 (L)1GABA0.50.0%0.0
IN17A090 (L)1ACh0.50.0%0.0
IN06B077 (R)1GABA0.50.0%0.0
IN06B067 (L)1GABA0.50.0%0.0
AN06B089 (R)1GABA0.50.0%0.0
CB1094 (L)1Glu0.50.0%0.0
DNp38 (L)1ACh0.50.0%0.0
AN07B004 (R)1ACh0.50.0%0.0
IN06B079 (R)2GABA0.50.0%0.0
IN08B104 (L)1ACh0.50.0%0.0
AN17B005 (L)1GABA0.50.0%0.0
CB2751 (L)1GABA0.50.0%0.0
5-HTPMPV03 (L)15-HT0.50.0%0.0
IN17A075 (L)1ACh0.50.0%0.0
PS316 (L)1GABA0.50.0%0.0
SApp11,SApp182ACh0.50.0%0.0
IN06A045 (L)1GABA0.50.0%0.0
IN06B047 (R)2GABA0.50.0%0.0
GNG617 (R)1Glu0.50.0%0.0
GNG326 (R)1Glu0.50.0%0.0
IN11A016 (L)2ACh0.50.0%0.0
IN06B081 (R)1GABA0.20.0%0.0
IN16B093 (L)1Glu0.20.0%0.0
IN11A032_e (L)1ACh0.20.0%0.0
IN12A063_a (L)1ACh0.20.0%0.0
IN08B036 (L)1ACh0.20.0%0.0
IN06A033 (R)1GABA0.20.0%0.0
IN03B076 (L)1GABA0.20.0%0.0
IN13A013 (L)1GABA0.20.0%0.0
IN19B008 (L)1ACh0.20.0%0.0
AN07B036 (L)1ACh0.20.0%0.0
CB4038 (L)1ACh0.20.0%0.0
DNg106 (L)1GABA0.20.0%0.0
AMMC023 (L)1GABA0.20.0%0.0
DNge006 (L)1ACh0.20.0%0.0
CvN5 (R)1unc0.20.0%0.0
IN19B103 (R)1ACh0.20.0%0.0
IN19B073 (R)1ACh0.20.0%0.0
IN17A099 (L)1ACh0.20.0%0.0
INXXX266 (R)1ACh0.20.0%0.0
CB0982 (L)1GABA0.20.0%0.0
EAXXX079 (R)1unc0.20.0%0.0
SApp19,SApp211ACh0.20.0%0.0
PS351 (L)1ACh0.20.0%0.0
GNG267 (R)1ACh0.20.0%0.0
GNG358 (L)1ACh0.20.0%0.0
PS117_a (R)1Glu0.20.0%0.0
LoVC13 (L)1GABA0.20.0%0.0
IN02A062 (L)1Glu0.20.0%0.0
IN03B046 (L)1GABA0.20.0%0.0
IN16B016 (L)1Glu0.20.0%0.0
IN03B090 (L)1GABA0.20.0%0.0
IN16B106 (L)1Glu0.20.0%0.0
IN12A035 (L)1ACh0.20.0%0.0
IN03B069 (L)1GABA0.20.0%0.0
IN06A040 (L)1GABA0.20.0%0.0
IN19B062 (R)1ACh0.20.0%0.0
IN19A043 (L)1GABA0.20.0%0.0
IN17A064 (L)1ACh0.20.0%0.0
SNpp101ACh0.20.0%0.0
tp2 MN (L)1unc0.20.0%0.0
IN17A011 (L)1ACh0.20.0%0.0
AMMC032 (L)1GABA0.20.0%0.0
EAXXX079 (L)1unc0.20.0%0.0
CL118 (L)1GABA0.20.0%0.0
CB1265 (L)1GABA0.20.0%0.0
PS329 (L)1GABA0.20.0%0.0
AN10B017 (R)1ACh0.20.0%0.0
DNge096 (R)1GABA0.20.0%0.0
PS326 (L)1Glu0.20.0%0.0
LoVC18 (L)1DA0.20.0%0.0
MNnm07,MNnm12 (L)1unc0.20.0%0.0
IN27X014 (L)1GABA0.20.0%0.0
IN05B016 (R)1GABA0.20.0%0.0
IN03B063 (L)1GABA0.20.0%0.0
IN07B096_a (L)1ACh0.20.0%0.0
IN17A078 (L)1ACh0.20.0%0.0
IN17A071, IN17A081 (L)1ACh0.20.0%0.0
SNpp081ACh0.20.0%0.0
IN07B047 (L)1ACh0.20.0%0.0
SNpp331ACh0.20.0%0.0
IN17B017 (L)1GABA0.20.0%0.0
IN17A057 (L)1ACh0.20.0%0.0
IN17A059,IN17A063 (L)1ACh0.20.0%0.0
IN08B035 (L)1ACh0.20.0%0.0
IN07B026 (L)1ACh0.20.0%0.0
IN27X007 (R)1unc0.20.0%0.0
IN12A007 (L)1ACh0.20.0%0.0
SAD070 (L)1GABA0.20.0%0.0
GNG416 (L)1ACh0.20.0%0.0
PS323 (L)1GABA0.20.0%0.0
DNge071 (L)1GABA0.20.0%0.0
GNG330 (L)1Glu0.20.0%0.0
AN07B024 (L)1ACh0.20.0%0.0
AMMC033 (L)1GABA0.20.0%0.0
vMS13 (L)1GABA0.20.0%0.0
GNG430_a (L)1ACh0.20.0%0.0
AN06B090 (L)1GABA0.20.0%0.0
CB4094 (L)1ACh0.20.0%0.0