Home
Types List
Help
Male CNS – Cell Type Explorer
GitHub
YouTube
neuPrint ⧉

R1-R6(L)⧉

AKA: R1-6 (Flywire, CTE-FAFB)

3377
Total Neurons
Right: 2265 | Left: 1112
log ratio : -1.03
67,702
Total Synapses
Post: 22,487 | Pre: 45,215
log ratio : 1.01
60.9
Mean Synapses
Post: 20.2 | Pre: 40.7
log ratio : 1.01
HA(97.3% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
20.1
40.5
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
----------0
2---------2
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
--------
--------
AME
-
-
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
-
-

Population spatial coverage

Complete Synapse Density Grid for ME (L)
Complete Synapse Density Grid for LO (L)
Complete Synapse Density Grid for LOP (L)
Complete Cell Count Grid for ME (L)
Complete Cell Count Grid for LO (L)
Complete Cell Count Grid for LOP (L)

Neuron Visualization ⧉

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name∑
In		%
In		log
ratio		∑
Out		%
Out
LA(L)22,31399.3%1.0144,97899.6%
Optic-unspecified(L)1570.7%0.261880.4%
ME(L)00.0%inf20.0%

Connectivity

Inputs

upstream
partner		#NTconns
R1-R6		%
In		CV
L4 (L)337ACh4.150.6%0.7
L2 (L)285ACh1.923.5%0.9
L1 (L)178Glu0.67.4%1.3
Lawf1 (L)19ACh0.55.8%0.7
Lai (L)26Glu0.33.9%0.9
R1-R6138HA0.22.9%1.1
T1 (L)46HA0.22.7%0.9
C3 (L)92GABA0.22.2%0.8
Lawf2 (L)12ACh0.00.4%0.7
C2 (L)8GABA0.00.2%1.0
L5 (L)3ACh0.00.2%1.2
L3 (L)8ACh0.00.1%0.3
R8p4HA0.00.1%0.6
R1-R6 (L)2HA0.00.0%0.3
R8y (L)1HA0.00.0%0.0
R7y1HA0.00.0%0.0
R7d1HA0.00.0%0.0
R8_unclear1HA0.00.0%0.0
R8d1HA0.00.0%0.0

Outputs

downstream
partner		#NTconns
R1-R6		%
Out		CV
L2 (L)301ACh34.943.8%0.7
L1 (L)300Glu32.841.2%0.7
L3 (L)296ACh8.911.2%0.8
T1 (L)208HA1.21.5%1.2
Lai (L)27Glu0.70.9%1.1
L4 (L)236ACh0.60.8%1.0
R1-R6146HA0.20.3%1.2
C3 (L)83GABA0.10.2%0.7
Lawf1 (L)18ACh0.10.1%1.1
L5 (L)13ACh0.00.0%1.6
C2 (L)20GABA0.00.0%0.8
Lawf2 (L)6ACh0.00.0%0.6
R8y2HA0.00.0%0.2
R7y4HA0.00.0%0.3
R8d1HA0.00.0%0.0
R7d1HA0.00.0%0.0
R8_unclear1HA0.00.0%0.0
R8p2HA0.00.0%0.0
R8y (L)1HA0.00.0%0.0
R7p1HA0.00.0%0.0
R7_unclear1HA0.00.0%0.0