Male CNS – Cell Type Explorer

PhG13

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,152
Total Synapses
Right: 963 | Left: 1,189
log ratio : 0.30
1,076
Mean Synapses
Right: 963 | Left: 1,189
log ratio : 0.30
ACh(72.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
GNG33041.1%0.6652038.5%
PRW27033.7%0.8247635.3%
CentralBrain-unspecified18122.6%0.8232023.7%
FLA212.6%0.70342.5%

Connectivity

Inputs

upstream
partner
#NTconns
PhG13
%
In
CV
GNG0162unc163.547.3%0.0
PhG132ACh8725.2%0.1
LB1e12ACh246.9%0.6
AN05B0352GABA9.52.7%0.0
LgAG35ACh92.6%0.3
GNG0902GABA7.52.2%0.0
GNG5512GABA61.7%0.0
LgAG84Glu3.51.0%0.2
PhG1c3ACh2.50.7%0.6
PhG161ACh20.6%0.0
GNG1451GABA20.6%0.0
PRW0481ACh1.50.4%0.0
SLP2431GABA1.50.4%0.0
PhG102ACh1.50.4%0.3
LB1c2ACh1.50.4%0.3
PhG81ACh10.3%0.0
GNG4071ACh10.3%0.0
AN09B0331ACh10.3%0.0
PhG121ACh10.3%0.0
PRW0752ACh10.3%0.0
PhG142ACh10.3%0.0
GNG5661Glu10.3%0.0
LB1a2ACh10.3%0.0
GNG4062ACh10.3%0.0
AN05B0762GABA10.3%0.0
PRW0711Glu0.50.1%0.0
ISN1ACh0.50.1%0.0
mAL5A11GABA0.50.1%0.0
GNG2171ACh0.50.1%0.0
GNG3191GABA0.50.1%0.0
GNG3281Glu0.50.1%0.0
mAL4C1unc0.50.1%0.0
GNG4091ACh0.50.1%0.0
GNG0431HA0.50.1%0.0
LB2c1ACh0.50.1%0.0
LB4a1ACh0.50.1%0.0
LB1d1ACh0.50.1%0.0
GNG3521GABA0.50.1%0.0
GNG2021GABA0.50.1%0.0
PhG111ACh0.50.1%0.0
LgAG41ACh0.50.1%0.0
LB2b1unc0.50.1%0.0
GNG6431unc0.50.1%0.0
CL1131ACh0.50.1%0.0
ANXXX2961ACh0.50.1%0.0
AN17A0621ACh0.50.1%0.0
GNG3241ACh0.50.1%0.0
GNG2641GABA0.50.1%0.0
PRW0641ACh0.50.1%0.0
AN27X0211GABA0.50.1%0.0
SLP2341ACh0.50.1%0.0

Outputs

downstream
partner
#NTconns
PhG13
%
Out
CV
AN05B0352GABA278.515.3%0.0
AN09B0332ACh24713.6%0.0
GNG5662Glu202.511.1%0.0
SLP2342ACh195.510.7%0.0
GNG0162unc1719.4%0.0
GNG4892ACh141.57.8%0.0
GNG1473Glu1126.2%0.0
PhG132ACh874.8%0.1
GNG6392GABA331.8%0.0
AN27X0212GABA30.51.7%0.0
LB1e15ACh301.6%0.5
AN27X0222GABA24.51.3%0.0
LgAG36ACh21.51.2%0.4
GNG3832ACh191.0%0.0
GNG5923Glu18.51.0%0.2
GNG3282Glu17.51.0%0.0
DNg652unc9.50.5%0.0
ALON22ACh9.50.5%0.0
mAL4C2unc8.50.5%0.0
GNG5512GABA7.50.4%0.0
GNG4074ACh6.50.4%0.4
GNG2351GABA60.3%0.0
AVLP4452ACh60.3%0.0
mAL64GABA60.3%0.5
SLP2382ACh5.50.3%0.0
GNG4094ACh5.50.3%0.6
GNG323 (M)1Glu50.3%0.0
PhG83ACh40.2%0.6
PhG1c3ACh40.2%0.5
mAL_m102GABA40.2%0.0
GNG3811ACh3.50.2%0.0
GNG1412unc3.50.2%0.0
PRW0482ACh3.50.2%0.0
PhG142ACh30.2%0.7
LgAG84Glu30.2%0.6
AN27X0202unc30.2%0.0
mAL4E2Glu30.2%0.0
GNG4062ACh30.2%0.0
mAL4A3Glu30.2%0.2
GNG2021GABA2.50.1%0.0
mAL4F2Glu2.50.1%0.6
LB1c4ACh2.50.1%0.3
GNG2802ACh2.50.1%0.0
mAL_m42GABA2.50.1%0.0
ANXXX1961ACh20.1%0.0
Z_lvPNm12ACh20.1%0.5
PhG102ACh20.1%0.0
GNG0962GABA20.1%0.0
SLP4552ACh20.1%0.0
GNG1452GABA20.1%0.0
GNG1551Glu1.50.1%0.0
mAL4D1unc1.50.1%0.0
PhG112ACh1.50.1%0.3
PhG122ACh1.50.1%0.3
PhG43ACh1.50.1%0.0
DNpe0492ACh1.50.1%0.0
mAL4H2GABA1.50.1%0.0
GNG0902GABA1.50.1%0.0
GNG0872Glu1.50.1%0.0
mAL5B2GABA1.50.1%0.0
LB1b1unc10.1%0.0
PhG51ACh10.1%0.0
AN09B0181ACh10.1%0.0
aPhM51ACh10.1%0.0
PRW0031Glu10.1%0.0
GNG1371unc10.1%0.0
DNpe0071ACh10.1%0.0
GNG4871ACh10.1%0.0
GNG3201GABA10.1%0.0
SLP4711ACh10.1%0.0
GNG4531ACh10.1%0.0
AN05B0761GABA10.1%0.0
PhG1b2ACh10.1%0.0
ANXXX4342ACh10.1%0.0
mAL4G2Glu10.1%0.0
VP1d_il2PN2ACh10.1%0.0
VP3+VP1l_ivPN2ACh10.1%0.0
GNG5102ACh10.1%0.0
mAL_m91GABA0.50.0%0.0
vLN261unc0.50.0%0.0
SLP4501ACh0.50.0%0.0
GNG0941Glu0.50.0%0.0
GNG2171ACh0.50.0%0.0
GNG3541GABA0.50.0%0.0
CB02271ACh0.50.0%0.0
GNG2641GABA0.50.0%0.0
PRW0531ACh0.50.0%0.0
GNG1981Glu0.50.0%0.0
GNG5191ACh0.50.0%0.0
GNG1761ACh0.50.0%0.0
PRW0721ACh0.50.0%0.0
SLP4691GABA0.50.0%0.0
GNG0881GABA0.50.0%0.0
DNc011unc0.50.0%0.0
GNG3211ACh0.50.0%0.0
LB2c1ACh0.50.0%0.0
mAL4B1Glu0.50.0%0.0
GNG6441unc0.50.0%0.0
LB2a1ACh0.50.0%0.0
GNG0381GABA0.50.0%0.0
LB1a1ACh0.50.0%0.0
PhG71ACh0.50.0%0.0
mAL5A11GABA0.50.0%0.0
mAL5A21GABA0.50.0%0.0
GNG2541GABA0.50.0%0.0
GNG3971ACh0.50.0%0.0
VP2+Z_lvPN1ACh0.50.0%0.0
GNG2011GABA0.50.0%0.0
PRW0671ACh0.50.0%0.0
GNG4851Glu0.50.0%0.0
GNG0441ACh0.50.0%0.0
AL-AST11ACh0.50.0%0.0
OA-VPM41OA0.50.0%0.0