Male CNS – Cell Type Explorer

PI3

AKA: mNSC_unknown (Flywire, CTE-FAFB)

8
Total Neurons
Right: 5 | Left: 3
log ratio : -0.74
2,245
Total Synapses
Right: 1,256 | Left: 989
log ratio : -0.34
280.6
Mean Synapses
Right: 251.2 | Left: 329.7
log ratio : 0.39
unc(32.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
PRW84138.3%-8.7225.3%
SMP61227.9%-7.6737.9%
CentralBrain-unspecified37217.0%-3.583181.6%
FLA36816.8%-7.5225.3%

Connectivity

Inputs

upstream
partner
#NTconns
PI3
%
In
CV
SMP3065GABA17.47.1%0.5
CB41257unc15.46.3%1.1
PRW0602Glu14.86.0%0.0
CB42057ACh14.15.8%0.3
PRW0416ACh11.64.7%0.8
SMP26112ACh114.5%0.4
PRW0376ACh8.83.6%0.2
CB19493unc8.63.5%0.3
PRW0174ACh8.13.3%0.5
GNG0512GABA8.13.3%0.0
PRW0426ACh6.52.7%0.5
SMP3025GABA5.62.3%0.5
SMP5822ACh52.0%0.0
PRW0314ACh4.92.0%0.1
AN05B1014GABA4.92.0%0.6
SMP4874ACh4.61.9%0.7
CB25396GABA4.21.7%0.6
PRW0069unc41.6%0.6
SMP2626ACh3.41.4%0.7
PRW0512Glu3.11.3%0.0
GNG1522ACh2.91.2%0.0
PRW0022Glu2.81.1%0.0
AN27X0092ACh2.61.1%0.0
ANXXX2024Glu2.61.1%0.2
SMP4841ACh2.41.0%0.0
AN27X0242Glu2.41.0%0.0
SMP5982Glu2.41.0%0.0
CB41245GABA2.41.0%0.6
PRW0612GABA2.41.0%0.0
PI38unc2.41.0%0.5
DNpe0362ACh2.20.9%0.0
PRW0057ACh2.20.9%0.4
SMP2975GABA2.20.9%0.5
PRW0562GABA20.8%0.0
GNG6302unc1.90.8%0.0
PRW0592GABA1.90.8%0.0
SLP0681Glu1.80.7%0.0
PRW0652Glu1.80.7%0.0
PRW0165ACh1.60.7%0.1
AN27X0183Glu1.50.6%0.1
PRW0382ACh1.40.6%0.0
DNg702GABA1.40.6%0.0
SAxx013ACh10.4%0.9
PRW0131ACh10.4%0.0
DNp582ACh10.4%0.0
SMP5233ACh10.4%0.0
AN09B0373unc10.4%0.4
CB42434ACh10.4%0.5
5thsLNv_LNd63ACh10.4%0.3
SMP5381Glu0.90.4%0.0
GNG55025-HT0.90.4%0.0
GNG0322Glu0.90.4%0.0
PRW0581GABA0.80.3%0.0
SMP5992Glu0.80.3%0.0
DNp482ACh0.80.3%0.0
VP1l+_lvPN2ACh0.60.3%0.6
PRW0681unc0.60.3%0.0
SMP3732ACh0.60.3%0.0
SLP3243ACh0.60.3%0.2
PRW0341ACh0.50.2%0.0
SMP3041GABA0.50.2%0.0
SMP3051unc0.50.2%0.0
DMS2unc0.50.2%0.0
PRW0542ACh0.50.2%0.0
SMP3072unc0.50.2%0.0
AVLP5942unc0.50.2%0.0
AN27X0172ACh0.50.2%0.0
GNG5723unc0.50.2%0.2
LHPV5i12ACh0.50.2%0.0
PRW0443unc0.50.2%0.2
GNG6272unc0.50.2%0.0
PRW0253ACh0.50.2%0.2
SMP4821ACh0.40.2%0.0
CB42421ACh0.40.2%0.0
LHPV6f51ACh0.40.2%0.0
CB10571Glu0.40.2%0.0
SMP532_b1Glu0.40.2%0.0
DNpe0331GABA0.40.2%0.0
DN1pA2Glu0.40.2%0.3
CB40772ACh0.40.2%0.3
DNpe0352ACh0.40.2%0.0
GNG4842ACh0.40.2%0.0
PRW0262ACh0.40.2%0.0
PRW0272ACh0.40.2%0.0
PRW0362GABA0.40.2%0.0
PRW0432ACh0.40.2%0.0
ANXXX1362ACh0.40.2%0.0
SMP0881Glu0.20.1%0.0
SMP3381Glu0.20.1%0.0
SMP2201Glu0.20.1%0.0
M_lvPNm351ACh0.20.1%0.0
GNG1211GABA0.20.1%0.0
PRW0331ACh0.20.1%0.0
PRW0392unc0.20.1%0.0
SMP7411unc0.20.1%0.0
IPC2unc0.20.1%0.0
PRW0711Glu0.20.1%0.0
AN05B0971ACh0.20.1%0.0
SLP2701ACh0.20.1%0.0
SLP4632unc0.20.1%0.0
PAL012unc0.20.1%0.0
GNG6281unc0.10.1%0.0
GNG4461ACh0.10.1%0.0
DNg281unc0.10.1%0.0
DNp251GABA0.10.1%0.0
ITP1unc0.10.1%0.0
DNg1031GABA0.10.1%0.0
GNG0701Glu0.10.1%0.0
ENS51unc0.10.1%0.0
DNc011unc0.10.1%0.0
DNpe0531ACh0.10.1%0.0
SMP7431ACh0.10.1%0.0
ANXXX1391GABA0.10.1%0.0
DNp241GABA0.10.1%0.0
CB42461unc0.10.1%0.0
ANXXX1691Glu0.10.1%0.0
PRW0221GABA0.10.1%0.0
CB10811GABA0.10.1%0.0
SMP7401Glu0.10.1%0.0
PRW0501unc0.10.1%0.0
DNd041Glu0.10.1%0.0
AstA11GABA0.10.1%0.0
SMP0011unc0.10.1%0.0
PRW004 (M)1Glu0.10.1%0.0
EA27X0061unc0.10.1%0.0
SLP3851ACh0.10.1%0.0
CB33081ACh0.10.1%0.0
SMP532_a1Glu0.10.1%0.0
CB09751ACh0.10.1%0.0
SCL002m1ACh0.10.1%0.0
GNG0671unc0.10.1%0.0
SMP1611Glu0.10.1%0.0
DSKMP31unc0.10.1%0.0
OA-VPM41OA0.10.1%0.0

Outputs

downstream
partner
#NTconns
PI3
%
Out
CV
PI38unc2.428.8%0.4
IPC9unc224.2%0.6
DMS3unc112.1%0.4
DH442unc0.910.6%0.1
SLP4031unc0.44.5%0.0
PRW0062unc0.23.0%0.0
DNpe0351ACh0.11.5%0.0
SMP7451unc0.11.5%0.0
CB42431ACh0.11.5%0.0
CB41251unc0.11.5%0.0
AN05B1011GABA0.11.5%0.0
GNG6281unc0.11.5%0.0
PRW0431ACh0.11.5%0.0
PRW0051ACh0.11.5%0.0
PRW0651Glu0.11.5%0.0
DNc021unc0.11.5%0.0
PRW0751ACh0.11.5%0.0