Male CNS – Cell Type Explorer

ORN_VM6v

34
Total Neurons
Right: 20 | Left: 9
log ratio : -1.15
18,739
Total Synapses
Right: 13,218 | Left: 5,016
log ratio : -1.40
551.1
Mean Synapses
Right: 660.9 | Left: 557.3
log ratio : -0.25
ACh(93.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL9,41798.3%-0.059,10099.3%
CentralBrain-unspecified1621.7%-1.43600.7%

Connectivity

Inputs

upstream
partner
#NTconns
ORN_VM6v
%
In
CV
ORN_VM6v34ACh102.245.4%0.6
il3LN62GABA33.214.8%0.0
lLN2F_a4unc24.410.8%0.1
lLN2X114ACh14.56.5%0.2
lLN2R_a6GABA10.04.4%0.4
lLN2X1211ACh9.84.4%0.4
ALIN52GABA5.52.4%0.0
ORN_VM6m21ACh4.21.9%0.5
lLN2X044ACh3.61.6%0.3
VM1_lPN1ACh3.21.4%0.0
lLN2T_b4ACh2.71.2%0.8
lLN2F_b4GABA1.70.7%0.3
lLN2X053ACh1.30.6%0.3
lLN2T_e3ACh1.10.5%0.2
v2LN53ACh10.4%0.1
lLN2P_c2GABA0.70.3%0.5
lLN2T_a4ACh0.60.3%0.4
lLN2P_b3GABA0.60.3%0.0
vLN272unc0.50.2%0.0
VM6_adPN2ACh0.40.2%0.0
lLN1_a2ACh0.30.1%0.0
lLN2X025GABA0.30.1%0.5
ORN_VA22ACh0.30.1%0.6
vLN292unc0.30.1%0.0
lLN1_bc6ACh0.30.1%0.2
ORN_VM6l3ACh0.20.1%0.9
lLN2T_c3ACh0.20.1%0.1
vLN281Glu0.20.1%0.0
lLN2P_a1GABA0.20.1%0.0
v2LN301unc0.20.1%0.0
VM6_lvPN2ACh0.10.1%0.6
OA-VUMa5 (M)1OA0.10.1%0.0
v2LNX011unc0.10.0%0.0
ORN_VM13ACh0.10.0%0.0
ORN_VM41ACh0.10.0%0.0
ORN_VM5d2ACh0.10.0%0.0
M_lvPNm461ACh0.10.0%0.0
M_l2PN3t182ACh0.10.0%0.0
v2LN331ACh0.00.0%0.0
ORN_VA7m1ACh0.00.0%0.0
ORN_DM41ACh0.00.0%0.0
VP2+VC5_l2PN1ACh0.00.0%0.0
SMP7351unc0.00.0%0.0
ORN_V1ACh0.00.0%0.0
ORN_VM5v1ACh0.00.0%0.0
ORN_VM21ACh0.00.0%0.0

Outputs

downstream
partner
#NTconns
ORN_VM6v
%
Out
CV
v2LN53ACh151.417.7%0.0
VM6_adPN2ACh108.112.7%0.0
ORN_VM6v34ACh102.212.0%0.7
M_l2PN3t184ACh68.68.0%0.1
vLN282Glu44.55.2%0.0
il3LN62GABA43.45.1%0.0
vLN292unc41.24.8%0.0
VP2+VC5_l2PN2ACh37.94.4%0.0
vLN272unc36.54.3%0.0
lLN2F_a4unc35.24.1%0.1
lLN2X1211ACh28.33.3%0.3
lLN2X114ACh22.12.6%0.0
lLN2R_a6GABA21.92.6%0.3
vLN254Glu20.82.4%0.3
v2LN334ACh14.51.7%0.5
lLN2X044ACh11.51.3%0.4
VM6_lvPN6ACh11.11.3%0.3
lLN2T_b4ACh10.41.2%0.8
v2LN312unc7.50.9%0.0
VM1_lPN1ACh3.70.4%0.0
lLN2P_a2GABA30.4%0.0
ORN_VM6m20ACh2.90.3%0.7
lLN2T_a4ACh2.90.3%0.4
M_l2PN10t192ACh2.60.3%0.0
lLN2X053ACh2.50.3%0.0
lLN2T_c4ACh2.20.3%0.9
lLN2F_b4GABA2.10.2%0.1
lLN1_a2ACh1.60.2%0.0
M_lvPNm382ACh1.40.2%0.0
v2LN301unc1.40.2%0.0
vLN242ACh1.20.1%0.0
lLN2T_e3ACh0.80.1%0.6
ALIN52GABA0.80.1%0.0
M_l2PNl202ACh0.80.1%0.0
v2LN40_21unc0.70.1%0.0
lLN2P_b3GABA0.70.1%0.2
M_imPNl922ACh0.60.1%0.0
lLN2X026GABA0.60.1%0.6
ORN_VM18ACh0.60.1%0.8
lLN2P_c2GABA0.50.1%0.4
M_lvPNm463ACh0.50.1%0.1
v2LNX012unc0.50.1%0.0
ORN_VM6l8ACh0.40.0%0.7
lLN1_bc7ACh0.30.0%0.3
v2LN371Glu0.30.0%0.0
OA-VUMa5 (M)1OA0.30.0%0.0
SMP1421unc0.20.0%0.0
PPM12012DA0.10.0%0.0
VC5_lvPN3ACh0.10.0%0.2
M_l2PNl211ACh0.10.0%0.0
ALBN11unc0.10.0%0.0
OA-VUMa2 (M)2OA0.10.0%0.3
v2LN3A1unc0.10.0%0.0
M_adPNm51ACh0.10.0%0.0
M_lPNm11D1ACh0.10.0%0.0
CSD15-HT0.10.0%0.0
VP3+_l2PN1ACh0.10.0%0.0
TRN_VP21ACh0.00.0%0.0
CB33831ACh0.00.0%0.0
CB29081ACh0.00.0%0.0
M_lvPNm241ACh0.00.0%0.0
v2LN491Glu0.00.0%0.0