Male CNS – Cell Type Explorer

ORN_VC3(L)

34
Total Neurons
Right: 18 | Left: 14
log ratio : -0.36
3,463
Total Synapses
Post: 1,617 | Pre: 1,846
log ratio : 0.19
247.4
Mean Synapses
Post: 115.5 | Pre: 131.9
log ratio : 0.19
ACh(94.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(L)98360.8%0.251,17363.5%
AL(R)62638.7%0.1067236.4%
CentralBrain-unspecified80.5%-3.0010.1%

Connectivity

Inputs

upstream
partner
#NTconns
ORN_VC3
%
In
CV
ORN_VC333ACh22.622.0%0.5
lLN2F_b (L)2GABA18.618.1%0.3
lLN2F_b (R)2GABA14.213.8%0.1
lLN2T_e (L)2ACh4.94.7%0.2
lLN2T_d (L)2unc4.54.4%0.2
lLN2T_b (L)2ACh3.93.8%0.1
lLN2X02 (L)3GABA3.93.8%0.4
lLN2T_b (R)2ACh3.43.3%0.8
lLN2X02 (R)3GABA3.23.1%0.2
lLN2F_a (L)2unc2.42.4%0.3
lLN2T_c (L)2ACh2.32.2%0.2
lLN2F_a (R)2unc2.12.1%0.4
lLN2P_b (L)4GABA1.91.8%0.7
lLN2T_d (R)2unc1.61.6%0.0
lLN2X04 (L)2ACh1.31.3%0.0
lLN2T_e (R)2ACh1.11.1%0.2
lLN2P_b (R)2GABA11.0%0.3
VC3_adPN (L)3ACh0.90.8%0.4
il3LN6 (R)1GABA0.70.7%0.0
VC3_adPN (R)3ACh0.50.5%0.4
lLN2X12 (R)4ACh0.50.5%0.5
lLN2T_c (R)2ACh0.40.4%0.7
ORN_VC16ACh0.40.4%0.0
lLN2X11 (R)1ACh0.40.3%0.0
il3LN6 (L)1GABA0.40.3%0.0
lLN2X11 (L)2ACh0.30.3%0.5
ORN_VM7v2ACh0.30.3%0.5
ORN_VM6l4ACh0.30.3%0.0
ORN_VM5v4ACh0.30.3%0.0
lLN2X04 (R)1ACh0.30.3%0.0
ORN_VM7d3ACh0.30.3%0.4
v2LN3A1_b (L)2ACh0.30.3%0.5
lLN2P_c (R)3GABA0.30.3%0.4
lLN1_bc (L)4ACh0.30.3%0.0
v2LN30 (R)1unc0.20.2%0.0
ORN_VM42ACh0.20.2%0.3
lLN1_bc (R)3ACh0.20.2%0.0
ORN_VC51ACh0.20.2%0.0
lLN2R_a (L)2GABA0.20.2%0.3
lLN2X12 (L)3ACh0.20.2%0.0
lLN2X05 (L)1ACh0.20.2%0.0
lLN2X05 (R)1ACh0.20.2%0.0
OA-VUMa2 (M)1OA0.10.1%0.0
ORN_VA22ACh0.10.1%0.0
ORN_VM21ACh0.10.1%0.0
ORN_VM6m1ACh0.10.1%0.0
l2LN19 (L)1GABA0.10.1%0.0
ORN_VC21ACh0.10.1%0.0
lLN12A (L)1ACh0.10.1%0.0
M_lvPNm31 (R)1ACh0.10.1%0.0
M_adPNm5 (R)1ACh0.10.1%0.0
M_vPNml50 (L)1GABA0.10.1%0.0
lLN2P_a (L)1GABA0.10.1%0.0
lLN2T_a (R)1ACh0.10.1%0.0
lLN2P_c (L)1GABA0.10.1%0.0
CSD (L)15-HT0.10.1%0.0
ORN_VM31ACh0.10.1%0.0
lLN1_a (L)1ACh0.10.1%0.0
v2LN3A1_b (R)1ACh0.10.1%0.0
lLN2T_a (L)1ACh0.10.1%0.0

Outputs

downstream
partner
#NTconns
ORN_VC3
%
Out
CV
VC3_adPN (L)4ACh142.830.0%0.3
VC3_adPN (R)4ACh69.414.6%0.5
lLN2F_b (R)2GABA347.1%0.1
lLN2X02 (L)3GABA26.45.5%0.3
ORN_VC333ACh25.25.3%0.6
lLN2T_b (R)2ACh16.63.5%0.8
M_adPNm5 (L)5ACh15.43.2%0.6
lLN2P_b (R)5GABA15.23.2%0.9
il3LN6 (R)1GABA10.42.2%0.0
il3LN6 (L)1GABA9.62.0%0.0
lLN2T_b (L)2ACh8.91.9%0.1
lLN2F_a (R)2unc81.7%0.1
lLN2F_b (L)2GABA6.81.4%0.2
lLN2P_a (R)2GABA6.11.3%0.5
M_adPNm4 (L)1ACh5.31.1%0.0
M_l2PNl20 (L)1ACh4.91.0%0.0
lLN2X02 (R)3GABA4.10.9%0.1
lLN2T_c (R)2ACh3.80.8%0.1
lLN2P_b (L)4GABA3.80.8%0.4
lLN2T_c (L)2ACh3.70.8%0.1
lLN2X04 (R)2ACh3.50.7%0.2
lLN2P_a (L)2GABA30.6%0.9
ORN_VC115ACh2.90.6%1.1
lLN2T_d (L)2unc2.90.6%0.2
lLN2X12 (R)5ACh2.90.6%0.4
lLN2P_c (L)2GABA2.60.5%0.9
lLN2X04 (L)2ACh2.40.5%0.1
lLN2F_a (L)2unc2.40.5%0.2
lLN2T_e (L)2ACh2.40.5%0.5
lLN2T_d (R)2unc2.30.5%0.2
v2LN30 (R)1unc2.10.4%0.0
lLN2P_c (R)4GABA1.90.4%0.5
v2LN3A1_b (L)5ACh1.80.4%0.5
lLN1_bc (L)11ACh1.60.3%0.6
M_adPNm5 (R)4ACh1.40.3%0.8
ALBN1 (L)1unc1.10.2%0.0
v2LN3A (L)2unc10.2%0.1
VM7d_adPN (R)2ACh0.90.2%0.7
lLN2X12 (L)6ACh0.90.2%0.5
v2LN3A (R)2unc0.80.2%0.1
VC5_lvPN (L)2ACh0.80.2%0.1
lLN2T_a (R)2ACh0.80.2%0.5
ORN_VM7v9ACh0.80.2%0.3
lLN2T_e (R)2ACh0.70.2%0.2
lLN2T_a (L)3ACh0.70.2%0.3
lLN2X11 (R)2ACh0.60.1%0.8
M_lvPNm25 (L)2ACh0.60.1%0.8
ORN_VC25ACh0.60.1%0.5
ORN_VC52ACh0.50.1%0.7
lLN2X05 (L)2ACh0.50.1%0.4
lLN2X11 (L)2ACh0.40.1%0.3
lLN1_a (L)1ACh0.40.1%0.0
LN60 (L)2GABA0.40.1%0.3
VC5_lvPN (R)3ACh0.40.1%0.4
VM7d_adPN (L)1ACh0.40.1%0.0
lLN2X05 (R)2ACh0.40.1%0.2
ORN_VM5v5ACh0.40.1%0.0
ORN_VA45ACh0.40.1%0.0
M_l2PNl20 (R)1ACh0.30.1%0.0
lLN1_bc (R)2ACh0.30.1%0.5
M_lvPNm25 (R)2ACh0.30.1%0.0
VC1_lPN (L)1ACh0.30.1%0.0
DNc02 (R)1unc0.30.1%0.0
M_adPNm4 (R)1ACh0.20.0%0.0
v2LN3A1_b (R)2ACh0.20.0%0.3
lLN2R_a (L)2GABA0.20.0%0.3
M_vPNml73 (L)1GABA0.20.0%0.0
M_lvPNm44 (L)1ACh0.20.0%0.0
M_lvPNm43 (L)1ACh0.10.0%0.0
M_lvPNm45 (L)1ACh0.10.0%0.0
VC4_adPN (L)1ACh0.10.0%0.0
lLN12A (R)1ACh0.10.0%0.0
M_lPNm11D (R)2ACh0.10.0%0.0
ORN_VM6l1ACh0.10.0%0.0
VM4_adPN (L)1ACh0.10.0%0.0
OA-VUMa2 (M)2OA0.10.0%0.0
M_l2PNl21 (L)1ACh0.10.0%0.0
ORN_VM6m1ACh0.10.0%0.0
lLN1_a (R)1ACh0.10.0%0.0
ORN_VM5d1ACh0.10.0%0.0
CT1 (L)1GABA0.10.0%0.0
CB2908 (L)1ACh0.10.0%0.0
M_lvPNm44 (R)1ACh0.10.0%0.0
v2LN30 (L)1unc0.10.0%0.0
M_vPNml73 (R)1GABA0.10.0%0.0
M_vPNml50 (R)1GABA0.10.0%0.0
CB3202 (R)1ACh0.10.0%0.0
M_lvPNm46 (L)1ACh0.10.0%0.0
CSD (L)15-HT0.10.0%0.0
M_adPNm3 (L)1ACh0.10.0%0.0
M_lvPNm24 (R)1ACh0.10.0%0.0
M_imPNl92 (R)1ACh0.10.0%0.0
DNc01 (R)1unc0.10.0%0.0
v2LN34C (L)1ACh0.10.0%0.0
M_vPNml83 (L)1GABA0.10.0%0.0
ORN_VA7l1ACh0.10.0%0.0
AL-MBDL1 (L)1ACh0.10.0%0.0