Male CNS – Cell Type Explorer

OCC01b(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,899
Total Synapses
Post: 1,774 | Pre: 125
log ratio : -3.83
1,899
Mean Synapses
Post: 1,774 | Pre: 125
log ratio : -3.83
ACh(74.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (15 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SPS(L)53430.1%-4.312721.6%
IPS(L)26014.7%-4.8597.2%
CentralBrain-unspecified22312.6%-2.633628.8%
SPS(R)1629.1%-4.02108.0%
SAD1438.1%-3.9997.2%
AMMC(L)1438.1%-4.3575.6%
CAN(L)1035.8%-5.1032.4%
GNG864.8%-3.4386.4%
VES(L)392.2%-3.2943.2%
PLP(L)231.3%-1.9464.8%
IB261.5%-3.7021.6%
FLA(L)171.0%-inf00.0%
AMMC(R)120.7%-inf00.0%
GOR(L)20.1%1.0043.2%
PRW10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
OCC01b
%
In
CV
JO-C/D/E38ACh1338.1%1.1
aMe_TBD1 (R)1GABA915.5%0.0
PS307 (L)1Glu804.9%0.0
PS307 (R)1Glu654.0%0.0
aMe_TBD1 (L)1GABA493.0%0.0
GNG311 (R)1ACh412.5%0.0
AN19B028 (R)1ACh402.4%0.0
PLP032 (R)1ACh392.4%0.0
GNG311 (L)1ACh372.3%0.0
PLP032 (L)1ACh322.0%0.0
AN27X011 (L)1ACh301.8%0.0
PS137 (L)2Glu261.6%0.4
CL053 (R)1ACh241.5%0.0
PS260 (R)2ACh221.3%0.4
LAL190 (R)1ACh201.2%0.0
LAL190 (L)1ACh191.2%0.0
CL053 (L)1ACh181.1%0.0
AN19B019 (R)1ACh181.1%0.0
OCG01b (R)1ACh171.0%0.0
AMMC036 (L)3ACh171.0%0.6
AN27X011 (R)1ACh161.0%0.0
AN19B019 (L)1ACh150.9%0.0
CL336 (R)1ACh140.9%0.0
VES200m (R)3Glu140.9%0.6
DNg27 (R)1Glu130.8%0.0
LoVP18 (L)5ACh130.8%0.7
PLP231 (L)2ACh120.7%0.3
AMMC036 (R)3ACh120.7%0.5
GNG331 (R)2ACh120.7%0.2
CB0285 (L)1ACh110.7%0.0
AN08B049 (R)1ACh110.7%0.0
GNG331 (L)2ACh110.7%0.5
aMe5 (L)6ACh110.7%0.5
DNg27 (L)1Glu100.6%0.0
CB0647 (R)1ACh100.6%0.0
CL336 (L)1ACh90.5%0.0
DNae009 (L)1ACh90.5%0.0
AN19B025 (R)1ACh90.5%0.0
AVLP530 (R)2ACh90.5%0.3
LoVP18 (R)3ACh90.5%0.3
MeVP7 (L)5ACh90.5%0.4
AN23B001 (R)1ACh80.5%0.0
DNge148 (R)1ACh80.5%0.0
AN08B009 (R)1ACh70.4%0.0
AVLP530 (L)2ACh70.4%0.7
PS008_a4 (L)2Glu70.4%0.4
OA-VUMa4 (M)2OA70.4%0.4
TmY14 (L)7unc70.4%0.0
PS008_a1 (L)1Glu60.4%0.0
AMMC016 (R)1ACh60.4%0.0
PS276 (L)1Glu60.4%0.0
MeVP60 (L)1Glu60.4%0.0
LoVP101 (L)1ACh60.4%0.0
PLP231 (R)2ACh60.4%0.7
CB4072 (R)2ACh60.4%0.3
LoVC25 (R)3ACh60.4%0.7
LoVC25 (L)3ACh60.4%0.4
MeVPLo1 (L)2Glu60.4%0.0
PVLP149 (L)1ACh50.3%0.0
AVLP525 (L)1ACh50.3%0.0
PS234 (L)1ACh50.3%0.0
OCG01c (L)1Glu50.3%0.0
AN07B046_a (R)1ACh50.3%0.0
CB1787 (R)1ACh50.3%0.0
AN19B025 (L)1ACh50.3%0.0
DNpe026 (R)1ACh50.3%0.0
SMP457 (R)1ACh50.3%0.0
PS300 (R)1Glu50.3%0.0
OA-AL2i4 (L)1OA50.3%0.0
MeVPLp1 (R)1ACh50.3%0.0
CB4072 (L)2ACh50.3%0.6
VES200m (L)3Glu50.3%0.6
CB2250 (R)2Glu50.3%0.2
PLP301m (R)2ACh50.3%0.2
PS019 (L)2ACh50.3%0.2
LC36 (R)3ACh50.3%0.3
DNpe037 (L)1ACh40.2%0.0
SMP048 (R)1ACh40.2%0.0
WED210 (L)1ACh40.2%0.0
PS008_a1 (R)1Glu40.2%0.0
CB1012 (L)1Glu40.2%0.0
CB1227 (R)1Glu40.2%0.0
AMMC033 (L)1GABA40.2%0.0
AN18B032 (R)1ACh40.2%0.0
CL260 (L)1ACh40.2%0.0
DNge038 (R)1ACh40.2%0.0
DNp46 (R)1ACh40.2%0.0
PS180 (L)1ACh40.2%0.0
MeVPLo1 (R)1Glu40.2%0.0
GNG666 (L)1ACh40.2%0.0
DNae009 (R)1ACh40.2%0.0
LPT59 (L)1Glu40.2%0.0
CB1282 (L)2ACh40.2%0.5
MeVP7 (R)2ACh40.2%0.5
CB1787 (L)2ACh40.2%0.5
LC35a (L)3ACh40.2%0.4
AN19B001 (L)1ACh30.2%0.0
PS115 (R)1Glu30.2%0.0
PS046 (L)1GABA30.2%0.0
DNge148 (L)1ACh30.2%0.0
PS300 (L)1Glu30.2%0.0
SMP048 (L)1ACh30.2%0.0
GNG290 (R)1GABA30.2%0.0
AN08B110 (R)1ACh30.2%0.0
CB1030 (R)1ACh30.2%0.0
CB1260 (L)1ACh30.2%0.0
AN18B053 (R)1ACh30.2%0.0
GNG333 (R)1ACh30.2%0.0
AN19B024 (R)1ACh30.2%0.0
MeVP59 (L)1ACh30.2%0.0
AMMC037 (L)1GABA30.2%0.0
GNG307 (L)1ACh30.2%0.0
CB0285 (R)1ACh30.2%0.0
CL248 (R)1GABA30.2%0.0
DNp38 (L)1ACh30.2%0.0
VES104 (L)1GABA30.2%0.0
AVLP016 (L)1Glu30.2%0.0
PS137 (R)2Glu30.2%0.3
PS209 (L)2ACh30.2%0.3
CL167 (L)2ACh30.2%0.3
CB1094 (R)2Glu30.2%0.3
MeVP9 (L)2ACh30.2%0.3
LC36 (L)3ACh30.2%0.0
MeVP8 (L)3ACh30.2%0.0
AN08B107 (R)1ACh20.1%0.0
PS238 (L)1ACh20.1%0.0
DNa10 (L)1ACh20.1%0.0
SMP457 (L)1ACh20.1%0.0
AMMC014 (L)1ACh20.1%0.0
PS230 (L)1ACh20.1%0.0
PS008_a2 (L)1Glu20.1%0.0
PS095 (L)1GABA20.1%0.0
AN04A001 (L)1ACh20.1%0.0
VES023 (L)1GABA20.1%0.0
WED143_c (R)1ACh20.1%0.0
PS276 (R)1Glu20.1%0.0
CB0324 (R)1ACh20.1%0.0
PS042 (L)1ACh20.1%0.0
PS253 (R)1ACh20.1%0.0
LT64 (L)1ACh20.1%0.0
IB096 (R)1Glu20.1%0.0
CL001 (L)1Glu20.1%0.0
AN27X008 (R)1HA20.1%0.0
AN23B003 (R)1ACh20.1%0.0
MeVP54 (R)1Glu20.1%0.0
PLP301m (L)1ACh20.1%0.0
LAL304m (L)1ACh20.1%0.0
PS115 (L)1Glu20.1%0.0
GNG575 (R)1Glu20.1%0.0
PS265 (L)1ACh20.1%0.0
DNa14 (L)1ACh20.1%0.0
AN27X015 (L)1Glu20.1%0.0
CB0647 (L)1ACh20.1%0.0
DNpe043 (R)1ACh20.1%0.0
GNG100 (L)1ACh20.1%0.0
OA-VUMa2 (M)1OA20.1%0.0
PLP211 (R)1unc20.1%0.0
PS112 (R)1Glu20.1%0.0
OCG06 (R)1ACh20.1%0.0
DNb04 (R)1Glu20.1%0.0
WED006 (L)1GABA20.1%0.0
LoVC18 (L)1DA20.1%0.0
CL110 (L)1ACh20.1%0.0
OCG01d (R)1ACh20.1%0.0
5-HTPMPV03 (R)15-HT20.1%0.0
CL167 (R)2ACh20.1%0.0
GNG464 (L)2GABA20.1%0.0
PS333 (R)2ACh20.1%0.0
PS005_b (L)2Glu20.1%0.0
PS335 (R)2ACh20.1%0.0
AN19B059 (R)2ACh20.1%0.0
PS241 (R)2ACh20.1%0.0
PLP219 (L)2ACh20.1%0.0
DNge138 (M)2unc20.1%0.0
PS306 (L)1GABA10.1%0.0
DNp32 (L)1unc10.1%0.0
DNge004 (L)1Glu10.1%0.0
GNG633 (L)1GABA10.1%0.0
OA-ASM2 (L)1unc10.1%0.0
AMMC013 (L)1ACh10.1%0.0
DNb04 (L)1Glu10.1%0.0
FB5W_a (L)1Glu10.1%0.0
ATL044 (L)1ACh10.1%0.0
CB4090 (L)1ACh10.1%0.0
WED143_c (L)1ACh10.1%0.0
CB1072 (L)1ACh10.1%0.0
PS059 (L)1GABA10.1%0.0
PS202 (L)1ACh10.1%0.0
PS265 (R)1ACh10.1%0.0
PS188 (L)1Glu10.1%0.0
PS142 (L)1Glu10.1%0.0
PS112 (L)1Glu10.1%0.0
PS046 (R)1GABA10.1%0.0
GNG494 (L)1ACh10.1%0.0
PS008_b (R)1Glu10.1%0.0
PS008_b (L)1Glu10.1%0.0
PS008_a4 (R)1Glu10.1%0.0
CB1977 (L)1ACh10.1%0.0
PS034 (L)1ACh10.1%0.0
PS194 (L)1Glu10.1%0.0
PS316 (L)1GABA10.1%0.0
CL235 (L)1Glu10.1%0.0
CB3132 (R)1ACh10.1%0.0
GNG338 (R)1ACh10.1%0.0
GNG624 (R)1ACh10.1%0.0
CB2050 (L)1ACh10.1%0.0
IB026 (L)1Glu10.1%0.0
GNG413 (R)1Glu10.1%0.0
GNG416 (R)1ACh10.1%0.0
CL239 (L)1Glu10.1%0.0
CB1299 (L)1ACh10.1%0.0
PS041 (L)1ACh10.1%0.0
WED143_a (R)1ACh10.1%0.0
WED098 (L)1Glu10.1%0.0
CB4097 (L)1Glu10.1%0.0
CL171 (L)1ACh10.1%0.0
SAD047 (L)1Glu10.1%0.0
CB1792 (L)1GABA10.1%0.0
WED143_b (R)1ACh10.1%0.0
CB1131 (L)1ACh10.1%0.0
GNG336 (L)1ACh10.1%0.0
CB1299 (R)1ACh10.1%0.0
AVLP462 (L)1GABA10.1%0.0
DNg53 (R)1ACh10.1%0.0
AOTU007 (R)1ACh10.1%0.0
PS208 (R)1ACh10.1%0.0
CB3866 (L)1ACh10.1%0.0
SAD046 (L)1ACh10.1%0.0
GNG290 (L)1GABA10.1%0.0
DNg02_a (L)1ACh10.1%0.0
SAD115 (R)1ACh10.1%0.0
PS114 (L)1ACh10.1%0.0
SAD005 (L)1ACh10.1%0.0
LoVP_unclear (L)1ACh10.1%0.0
DNp16_a (L)1ACh10.1%0.0
PS093 (L)1GABA10.1%0.0
CB1942 (L)1GABA10.1%0.0
DNpe010 (L)1Glu10.1%0.0
AN18B004 (R)1ACh10.1%0.0
AN19B001 (R)1ACh10.1%0.0
GNG166 (R)1Glu10.1%0.0
AN00A006 (M)1GABA10.1%0.0
OCC01b (R)1ACh10.1%0.0
CB1942 (R)1GABA10.1%0.0
PS182 (R)1ACh10.1%0.0
PS356 (L)1GABA10.1%0.0
PS233 (L)1ACh10.1%0.0
OCG02b (R)1ACh10.1%0.0
PS355 (L)1GABA10.1%0.0
OCG06 (L)1ACh10.1%0.0
DNg106 (L)1GABA10.1%0.0
WED092 (L)1ACh10.1%0.0
GNG306 (L)1GABA10.1%0.0
CB2664 (L)1ACh10.1%0.0
GNG547 (L)1GABA10.1%0.0
CL155 (R)1ACh10.1%0.0
DNge096 (R)1GABA10.1%0.0
SAD073 (L)1GABA10.1%0.0
GNG504 (R)1GABA10.1%0.0
PS180 (R)1ACh10.1%0.0
CB0609 (R)1GABA10.1%0.0
OA-VUMa5 (M)1OA10.1%0.0
GNG344 (M)1GABA10.1%0.0
ExR3 (L)15-HT10.1%0.0
DNpe055 (L)1ACh10.1%0.0
ALIN2 (L)1ACh10.1%0.0
PS047_b (L)1ACh10.1%0.0
CL264 (L)1ACh10.1%0.0
GNG006 (M)1GABA10.1%0.0
DNge152 (M)1unc10.1%0.0
DNp54 (R)1GABA10.1%0.0
PLP230 (R)1ACh10.1%0.0
MeVPMe6 (L)1Glu10.1%0.0
PLP211 (L)1unc10.1%0.0
DNp54 (L)1GABA10.1%0.0
SAD010 (L)1ACh10.1%0.0
DNp12 (L)1ACh10.1%0.0
LoVC18 (R)1DA10.1%0.0
GNG011 (L)1GABA10.1%0.0
V1 (L)1ACh10.1%0.0
OA-AL2i3 (L)1OA10.1%0.0
SMP544 (L)1GABA10.1%0.0
GNG106 (L)1ACh10.1%0.0
GNG144 (L)1GABA10.1%0.0
DNp19 (L)1ACh10.1%0.0
MeVPMe2 (R)1Glu10.1%0.0
5-HTPMPV03 (L)15-HT10.1%0.0
PS100 (L)1GABA10.1%0.0
PS124 (L)1ACh10.1%0.0
LoVCLo3 (R)1OA10.1%0.0
AN07B004 (R)1ACh10.1%0.0
VS (L)1ACh10.1%0.0
DNp18 (L)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
OCC01b
%
Out
CV
DNbe001 (L)1ACh189.9%0.0
DNp63 (L)1ACh95.0%0.0
DNbe001 (R)1ACh52.8%0.0
DNp10 (L)1ACh52.8%0.0
DNp31 (R)1ACh52.8%0.0
VES053 (L)1ACh42.2%0.0
DNp103 (L)1ACh42.2%0.0
DNp63 (R)1ACh42.2%0.0
CB2646 (L)1ACh31.7%0.0
DNa03 (L)1ACh31.7%0.0
CL323 (L)1ACh31.7%0.0
PS111 (L)1Glu31.7%0.0
DNpe045 (R)1ACh31.7%0.0
DNp70 (L)1ACh31.7%0.0
DNb05 (L)1ACh31.7%0.0
DNge073 (L)1ACh21.1%0.0
CL12X (L)1GABA21.1%0.0
CB4072 (R)1ACh21.1%0.0
AMMC033 (L)1GABA21.1%0.0
VES019 (R)1GABA21.1%0.0
OCC01b (R)1ACh21.1%0.0
GNG514 (L)1Glu21.1%0.0
DNpe020 (M)1ACh21.1%0.0
PLP093 (L)1ACh21.1%0.0
MeVPLo1 (L)1Glu21.1%0.0
OA-VUMa4 (M)1OA21.1%0.0
PLP092 (R)1ACh21.1%0.0
aMe_TBD1 (R)1GABA21.1%0.0
DNp31 (L)1ACh21.1%0.0
DNg75 (L)1ACh21.1%0.0
DNpe042 (L)1ACh21.1%0.0
DNge138 (M)2unc21.1%0.0
JO-C/D/E1ACh10.6%0.0
AN27X011 (L)1ACh10.6%0.0
GNG119 (L)1GABA10.6%0.0
CL336 (R)1ACh10.6%0.0
DNae009 (L)1ACh10.6%0.0
PLP256 (L)1Glu10.6%0.0
CB1072 (L)1ACh10.6%0.0
SAD111 (L)1GABA10.6%0.0
VES200m (R)1Glu10.6%0.0
CL339 (R)1ACh10.6%0.0
PS274 (L)1ACh10.6%0.0
DNb04 (L)1Glu10.6%0.0
CL176 (L)1Glu10.6%0.0
LAL184 (L)1ACh10.6%0.0
WED210 (L)1ACh10.6%0.0
LAL022 (L)1ACh10.6%0.0
SAD110 (L)1GABA10.6%0.0
DNge050 (R)1ACh10.6%0.0
LC36 (L)1ACh10.6%0.0
CB3132 (R)1ACh10.6%0.0
SMP459 (R)1ACh10.6%0.0
PS114 (R)1ACh10.6%0.0
IbSpsP (L)1ACh10.6%0.0
SAD200m (L)1GABA10.6%0.0
GNG507 (L)1ACh10.6%0.0
AMMC025 (L)1GABA10.6%0.0
CB1787 (R)1ACh10.6%0.0
PS096 (L)1GABA10.6%0.0
VES019 (L)1GABA10.6%0.0
PS276 (L)1Glu10.6%0.0
PS208 (L)1ACh10.6%0.0
AMMC025 (R)1GABA10.6%0.0
DNg02_d (L)1ACh10.6%0.0
ATL011 (L)1Glu10.6%0.0
CB4102 (L)1ACh10.6%0.0
CB1942 (L)1GABA10.6%0.0
DNpe010 (L)1Glu10.6%0.0
GNG637 (R)1GABA10.6%0.0
GNG554 (L)1Glu10.6%0.0
PS182 (L)1ACh10.6%0.0
LoVP18 (L)1ACh10.6%0.0
PS355 (L)1GABA10.6%0.0
PS090 (L)1GABA10.6%0.0
OCG06 (L)1ACh10.6%0.0
DNg95 (L)1ACh10.6%0.0
SMP457 (R)1ACh10.6%0.0
DNpe001 (R)1ACh10.6%0.0
GNG653 (L)1unc10.6%0.0
DNge099 (R)1Glu10.6%0.0
DNpe026 (L)1ACh10.6%0.0
GNG119 (R)1GABA10.6%0.0
GNG126 (L)1GABA10.6%0.0
CL264 (L)1ACh10.6%0.0
PS307 (R)1Glu10.6%0.0
DNge049 (R)1ACh10.6%0.0
DNg79 (L)1ACh10.6%0.0
DNp70 (R)1ACh10.6%0.0
SMP543 (L)1GABA10.6%0.0
LoVC18 (R)1DA10.6%0.0
MeVC2 (R)1ACh10.6%0.0
DNg74_b (L)1GABA10.6%0.0
LoVCLo3 (L)1OA10.6%0.0
DNp19 (L)1ACh10.6%0.0
OA-AL2i2 (R)1OA10.6%0.0
DNge050 (L)1ACh10.6%0.0
PS124 (L)1ACh10.6%0.0
OA-AL2i2 (L)1OA10.6%0.0
PS100 (L)1GABA10.6%0.0
OA-VUMa8 (M)1OA10.6%0.0
VES041 (L)1GABA10.6%0.0
MeVCMe1 (L)1ACh10.6%0.0
OA-AL2i1 (R)1unc10.6%0.0