Male CNS – Cell Type Explorer

MNxm03(L)[T2]{TBD}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,351
Total Synapses
Post: 1,348 | Pre: 3
log ratio : -8.81
1,351
Mean Synapses
Post: 1,348 | Pre: 3
log ratio : -8.81
unc(29.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm1,19488.6%-10.22133.3%
VNC-unspecified1077.9%-inf00.0%
HTct(UTct-T3)(L)312.3%-inf00.0%
IntTct80.6%-inf00.0%
LegNp(T3)(L)50.4%-inf00.0%
WTct(UTct-T2)(L)20.1%0.00266.7%
DMetaN(L)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
MNxm03
%
In
CV
INXXX261 (R)2Glu21216.5%1.0
INXXX249 (L)1ACh17013.3%0.0
INXXX249 (R)1ACh14511.3%0.0
INXXX287 (L)2GABA524.1%0.5
ANXXX202 (R)3Glu322.5%0.7
INXXX214 (R)1ACh302.3%0.0
IN05B091 (R)2GABA252.0%0.4
INXXX179 (R)1ACh221.7%0.0
INXXX287 (R)2GABA221.7%0.2
IN05B031 (L)1GABA201.6%0.0
SNxx153ACh201.6%0.2
INXXX261 (L)1Glu181.4%0.0
INXXX402 (R)1ACh181.4%0.0
IN05B031 (R)1GABA181.4%0.0
IN19B016 (L)1ACh171.3%0.0
INXXX199 (L)1GABA151.2%0.0
INXXX214 (L)1ACh151.2%0.0
IN14B003 (R)1GABA151.2%0.0
SAxx012ACh151.2%0.6
INXXX179 (L)1ACh141.1%0.0
INXXX402 (L)1ACh131.0%0.0
IN19B031 (R)1ACh120.9%0.0
IN02A004 (L)1Glu120.9%0.0
ANXXX202 (L)1Glu120.9%0.0
SApp082ACh120.9%0.2
INXXX224 (R)1ACh110.9%0.0
INXXX199 (R)1GABA110.9%0.0
IN14B003 (L)1GABA110.9%0.0
IN19B016 (R)1ACh110.9%0.0
INXXX295 (R)2unc110.9%0.5
INXXX244 (L)1unc100.8%0.0
ANXXX084 (R)2ACh100.8%0.0
INXXX233 (R)1GABA90.7%0.0
INXXX224 (L)1ACh90.7%0.0
IN02A044 (R)1Glu80.6%0.0
IN19B031 (L)1ACh80.6%0.0
INXXX412 (L)1GABA70.5%0.0
INXXX364 (L)1unc60.5%0.0
INXXX419 (R)1GABA60.5%0.0
IN10B011 (R)1ACh60.5%0.0
DNg98 (R)1GABA60.5%0.0
IN19B050 (R)2ACh60.5%0.7
IN10B011 (L)2ACh60.5%0.7
IN05B091 (L)2GABA60.5%0.0
INXXX290 (L)1unc50.4%0.0
INXXX244 (R)1unc50.4%0.0
IN02A044 (L)1Glu50.4%0.0
IN12A026 (R)1ACh50.4%0.0
ANXXX099 (L)1ACh50.4%0.0
INXXX364 (R)1unc40.3%0.0
INXXX233 (L)1GABA40.3%0.0
ANXXX318 (L)1ACh40.3%0.0
DNge151 (M)1unc40.3%0.0
DNp65 (R)1GABA40.3%0.0
AN05B004 (L)1GABA40.3%0.0
INXXX295 (L)2unc40.3%0.0
INXXX332 (L)2GABA40.3%0.0
IN06A136 (R)1GABA30.2%0.0
SNpp351ACh30.2%0.0
ANXXX318 (R)1ACh30.2%0.0
DNpe023 (R)1ACh30.2%0.0
ANXXX169 (R)1Glu30.2%0.0
IN00A017 (M)2unc30.2%0.3
SApp2ACh30.2%0.3
INXXX245 (R)1ACh20.2%0.0
INXXX245 (L)1ACh20.2%0.0
MNxm03 (R)1unc20.2%0.0
INXXX290 (R)1unc20.2%0.0
INXXX415 (L)1GABA20.2%0.0
INXXX341 (L)1GABA20.2%0.0
IN06A028 (L)1GABA20.2%0.0
dMS10 (R)1ACh20.2%0.0
IN02A030 (L)1Glu20.2%0.0
AN09B037 (R)1unc20.2%0.0
ANXXX084 (L)1ACh20.2%0.0
LN-DN21unc20.2%0.0
AN01A021 (R)1ACh20.2%0.0
DNge150 (M)1unc20.2%0.0
AN05B004 (R)1GABA20.2%0.0
DNp68 (R)1ACh20.2%0.0
IN05B070 (L)2GABA20.2%0.0
IN16B084 (L)2Glu20.2%0.0
IN00A001 (M)2unc20.2%0.0
IN05B070 (R)1GABA10.1%0.0
IN11B003 (L)1ACh10.1%0.0
IN12A026 (L)1ACh10.1%0.0
SApp02,SApp031ACh10.1%0.0
SNxx191ACh10.1%0.0
IN16B089 (L)1Glu10.1%0.0
IN03B074 (L)1GABA10.1%0.0
SNxx251ACh10.1%0.0
SNpp2315-HT10.1%0.0
INXXX391 (R)1GABA10.1%0.0
IN19B041 (R)1ACh10.1%0.0
IN19A047 (R)1GABA10.1%0.0
MNad11 (L)1unc10.1%0.0
IN19B038 (L)1ACh10.1%0.0
ENXXX128 (R)1unc10.1%0.0
IN27X002 (L)1unc10.1%0.0
INXXX377 (L)1Glu10.1%0.0
INXXX472 (L)1GABA10.1%0.0
INXXX339 (L)1ACh10.1%0.0
INXXX212 (R)1ACh10.1%0.0
INXXX212 (L)1ACh10.1%0.0
INXXX121 (R)1ACh10.1%0.0
INXXX133 (L)1ACh10.1%0.0
INXXX193 (L)1unc10.1%0.0
IN06B042 (R)1GABA10.1%0.0
IN19A026 (R)1GABA10.1%0.0
IN19B094 (R)1ACh10.1%0.0
IN23B016 (R)1ACh10.1%0.0
IN19B034 (R)1ACh10.1%0.0
IN02A010 (L)1Glu10.1%0.0
IN02A030 (R)1Glu10.1%0.0
vMS17 (L)1unc10.1%0.0
INXXX034 (M)1unc10.1%0.0
INXXX095 (R)1ACh10.1%0.0
IN06B008 (L)1GABA10.1%0.0
IN02A004 (R)1Glu10.1%0.0
ANXXX338 (R)1Glu10.1%0.0
AN09A005 (L)1unc10.1%0.0
AN06A030 (L)1Glu10.1%0.0
AN09A005 (R)1unc10.1%0.0
DNpe011 (L)1ACh10.1%0.0
ANXXX099 (R)1ACh10.1%0.0
ANXXX150 (L)1ACh10.1%0.0
DNp65 (L)1GABA10.1%0.0
DNge136 (R)1GABA10.1%0.0
DNg27 (L)1Glu10.1%0.0
DNp48 (R)1ACh10.1%0.0
DNc02 (L)1unc10.1%0.0
DNbe001 (L)1ACh10.1%0.0
DNp31 (R)1ACh10.1%0.0
DNp31 (L)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
MNxm03
%
Out
CV
IN19B054 (R)1ACh233.3%0.0
EN27X010 (L)1unc116.7%0.0
IN19B038 (L)1ACh116.7%0.0
IN19B041 (L)1ACh116.7%0.0
AN27X019 (L)1unc116.7%0.0