Male CNS – Cell Type Explorer

MNxm02(L)[T2]{TBD}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,482
Total Synapses
Post: 1,458 | Pre: 24
log ratio : -5.92
1,482
Mean Synapses
Post: 1,458 | Pre: 24
log ratio : -5.92
unc(67.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T2)(L)86459.3%-7.17625.0%
VNC-unspecified21614.8%-4.051354.2%
IntTct18913.0%-7.5614.2%
HTct(UTct-T3)(L)1298.8%-6.0128.3%
HTct(UTct-T3)(R)563.8%-inf00.0%
WTct(UTct-T2)(L)20.1%-1.0014.2%
DMetaN(L)10.1%0.0014.2%
MesoAN(L)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
MNxm02
%
In
CV
IN03A003 (L)1ACh16812.3%0.0
IN03A003 (R)1ACh856.2%0.0
INXXX472 (R)1GABA785.7%0.0
INXXX472 (L)1GABA785.7%0.0
IN08B072 (R)1ACh564.1%0.0
IN16B016 (L)1Glu473.4%0.0
IN12B048 (R)6GABA423.1%0.4
INXXX341 (R)2GABA413.0%0.0
DNge038 (R)1ACh272.0%0.0
IN21A003 (L)1Glu241.8%0.0
IN06A012 (R)1GABA221.6%0.0
IN13A007 (L)1GABA201.5%0.0
IN08B045 (R)1ACh191.4%0.0
AN19A018 (L)2ACh191.4%0.7
IN19A003 (L)1GABA181.3%0.0
AN19A018 (R)3ACh181.3%0.3
IN09A004 (L)1GABA161.2%0.0
INXXX058 (R)2GABA151.1%0.5
IN12B042 (R)2GABA141.0%0.4
IN19A016 (L)2GABA141.0%0.1
IN04B033 (L)1ACh120.9%0.0
IN06A012 (L)1GABA120.9%0.0
DNg44 (L)1Glu120.9%0.0
DNg27 (R)1Glu120.9%0.0
IN02A011 (L)1Glu110.8%0.0
IN21A012 (L)1ACh110.8%0.0
IN12B044_e (R)2GABA110.8%0.3
IN06B070 (R)4GABA110.8%0.5
IN12B044_c (R)1GABA100.7%0.0
ANXXX024 (R)1ACh100.7%0.0
IN21A017 (L)1ACh90.7%0.0
IN08B065 (R)2ACh90.7%0.1
IN08A026 (L)3Glu90.7%0.5
IN08B090 (R)1ACh80.6%0.0
IN04B036 (L)1ACh80.6%0.0
IN09A002 (L)1GABA80.6%0.0
DNge062 (R)1ACh80.6%0.0
DNge136 (L)2GABA80.6%0.5
INXXX122 (R)2ACh80.6%0.2
IN12B044_d (R)2GABA80.6%0.2
IN03A091 (L)3ACh80.6%0.4
IN08B082 (R)4ACh80.6%0.4
IN12B044_b (R)1GABA70.5%0.0
INXXX034 (M)1unc70.5%0.0
IN19A015 (L)1GABA70.5%0.0
DNde005 (L)1ACh70.5%0.0
DNg93 (R)1GABA70.5%0.0
IN03B036 (L)1GABA60.4%0.0
DNg74_b (R)1GABA60.4%0.0
DNpe018 (R)1ACh60.4%0.0
DNge151 (M)1unc60.4%0.0
DNge172 (R)1ACh60.4%0.0
IN12A025 (L)2ACh60.4%0.7
IN00A001 (M)2unc60.4%0.3
INXXX269 (L)1ACh50.4%0.0
IN11A020 (L)1ACh50.4%0.0
IN19A013 (L)1GABA50.4%0.0
IN05B091 (R)1GABA50.4%0.0
IN03A090 (L)1ACh50.4%0.0
INXXX214 (R)1ACh50.4%0.0
IN06A025 (R)1GABA50.4%0.0
IN09A009 (L)1GABA50.4%0.0
AN19B014 (R)1ACh40.3%0.0
INXXX355 (R)1GABA40.3%0.0
IN00A017 (M)1unc40.3%0.0
IN14B003 (L)1GABA40.3%0.0
IN18B021 (L)1ACh40.3%0.0
IN08A008 (L)1Glu40.3%0.0
IN03B036 (R)1GABA40.3%0.0
IN17A016 (L)1ACh40.3%0.0
IN10B014 (R)1ACh40.3%0.0
DNge137 (R)1ACh40.3%0.0
DNg50 (R)1ACh40.3%0.0
AN19B051 (R)2ACh40.3%0.0
INXXX045 (L)2unc40.3%0.0
INXXX003 (L)1GABA30.2%0.0
IN08B076 (R)1ACh30.2%0.0
SNpp451ACh30.2%0.0
IN27X003 (L)1unc30.2%0.0
IN04B087 (L)1ACh30.2%0.0
IN06A013 (L)1GABA30.2%0.0
IN06A025 (L)1GABA30.2%0.0
IN20A.22A004 (L)1ACh30.2%0.0
IN12B011 (R)1GABA30.2%0.0
ANXXX214 (R)1ACh30.2%0.0
DNp25 (L)1GABA30.2%0.0
DNge136 (R)1GABA30.2%0.0
DNg108 (R)1GABA30.2%0.0
IN08B058 (R)2ACh30.2%0.3
IN03A071 (L)2ACh30.2%0.3
INXXX008 (L)2unc30.2%0.3
IN21A007 (L)1Glu20.1%0.0
IN09A006 (L)1GABA20.1%0.0
IN09A010 (L)1GABA20.1%0.0
IN12B045 (R)1GABA20.1%0.0
IN12B045 (L)1GABA20.1%0.0
IN12B044_e (L)1GABA20.1%0.0
IN06B064 (R)1GABA20.1%0.0
IN08B092 (R)1ACh20.1%0.0
IN12B044_a (R)1GABA20.1%0.0
IN05B066 (L)1GABA20.1%0.0
IN04B049_c (L)1ACh20.1%0.0
IN07B030 (R)1Glu20.1%0.0
IN16B014 (L)1Glu20.1%0.0
IN19A022 (L)1GABA20.1%0.0
IN19A027 (L)1ACh20.1%0.0
IN21A010 (L)1ACh20.1%0.0
INXXX003 (R)1GABA20.1%0.0
INXXX025 (L)1ACh20.1%0.0
INXXX032 (R)1ACh20.1%0.0
AN01A021 (R)1ACh20.1%0.0
AN19B001 (R)1ACh20.1%0.0
AN12B008 (L)1GABA20.1%0.0
ANXXX002 (R)1GABA20.1%0.0
DNge137 (L)1ACh20.1%0.0
DNge032 (L)1ACh20.1%0.0
DNg74_a (R)1GABA20.1%0.0
IN20A.22A009 (L)2ACh20.1%0.0
IN00A002 (M)2GABA20.1%0.0
INXXX095 (R)2ACh20.1%0.0
IN27X003 (R)1unc10.1%0.0
IN12B079_b (R)1GABA10.1%0.0
AN05B050_c (L)1GABA10.1%0.0
IN04B018 (L)1ACh10.1%0.0
IN06B070 (L)1GABA10.1%0.0
IN19B058 (R)1ACh10.1%0.0
IN21A005 (L)1ACh10.1%0.0
IN06B066 (L)1GABA10.1%0.0
IN20A.22A008 (L)1ACh10.1%0.0
IN18B020 (R)1ACh10.1%0.0
IN02A011 (R)1Glu10.1%0.0
IN21A022 (L)1ACh10.1%0.0
IN12B064 (L)1GABA10.1%0.0
IN19B047 (L)1ACh10.1%0.0
IN12B046 (L)1GABA10.1%0.0
IN12B048 (L)1GABA10.1%0.0
IN21A085 (L)1Glu10.1%0.0
IN06B062 (R)1GABA10.1%0.0
IN12B079_d (R)1GABA10.1%0.0
IN12B054 (R)1GABA10.1%0.0
IN03A052 (L)1ACh10.1%0.0
IN08A032 (L)1Glu10.1%0.0
IN05B064_a (L)1GABA10.1%0.0
IN05B074 (L)1GABA10.1%0.0
IN08B060 (L)1ACh10.1%0.0
TN1c_d (L)1ACh10.1%0.0
vMS11 (L)1Glu10.1%0.0
IN04B100 (L)1ACh10.1%0.0
IN08B029 (L)1ACh10.1%0.0
IN27X002 (L)1unc10.1%0.0
IN08B029 (R)1ACh10.1%0.0
IN04B057 (L)1ACh10.1%0.0
IN11A011 (L)1ACh10.1%0.0
INXXX198 (L)1GABA10.1%0.0
IN02A010 (L)1Glu10.1%0.0
IN18B015 (R)1ACh10.1%0.0
INXXX008 (R)1unc10.1%0.0
vMS17 (L)1unc10.1%0.0
INXXX355 (L)1GABA10.1%0.0
IN21A020 (L)1ACh10.1%0.0
IN10B013 (R)1ACh10.1%0.0
IN03A012 (L)1ACh10.1%0.0
IN21A011 (L)1Glu10.1%0.0
IN03B032 (L)1GABA10.1%0.0
IN27X007 (L)1unc10.1%0.0
IN16B029 (L)1Glu10.1%0.0
IN21A009 (L)1Glu10.1%0.0
IN01A011 (R)1ACh10.1%0.0
INXXX029 (L)1ACh10.1%0.0
IN16B014 (R)1Glu10.1%0.0
IN18B005 (R)1ACh10.1%0.0
IN19A002 (L)1GABA10.1%0.0
INXXX107 (R)1ACh10.1%0.0
IN01A008 (R)1ACh10.1%0.0
DNc01 (R)1unc10.1%0.0
AN27X004 (R)1HA10.1%0.0
AN18B004 (L)1ACh10.1%0.0
EA06B010 (R)1Glu10.1%0.0
DNg82 (L)1ACh10.1%0.0
EA00B007 (M)1unc10.1%0.0
DNge149 (M)1unc10.1%0.0
DNg80 (L)1Glu10.1%0.0
DNg100 (R)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
MNxm02
%
Out
CV
IN03A091 (L)1ACh116.7%0.0
SNpp341ACh116.7%0.0
IN21A013 (L)1Glu116.7%0.0
IN19A011 (L)1GABA116.7%0.0
AN03B009 (R)1GABA116.7%0.0
AN19B025 (R)1ACh116.7%0.0