Male CNS – Cell Type Explorer

MNml29[T2]{24B.25B} ⧉

2
Neurons
Right: 1 | Left: 1
log ratio : 0.00
7,397
Synapses
Right: 2,935 | Left: 4,462
log ratio : 0.60
7,051
Connections
Right: 2,778 | Left: 4,273
log ratio : 0.62
Glu (47.9% CL)
Neurotransmitter
3,698.5
Synapses per Neuron
Right: 2,935 | Left: 4,462
log ratio : 0.60
3,525.5
Connections per Neuron
Right: 2,778 | Left: 4,273
log ratio : 0.62

Neuron Visualization ⧉ ⤓

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

Download neurons

Downloads one file per neuron that this page sends to the viewer (the neurons of this type plus any partners ticked in the tables below), packed into a single zip file. Neurons without a file are listed in missing_body_ids.txt inside the zip.

Format

screenshot of the 'copy URL' button in Neuroglancer Changes made inside Neuroglancer are invisible to the Cell Type Explorer. To download exactly the neurons selected in Neuroglancer, copy the URL from Neuroglancer and paste it here:

ROI Innervation (6 ROIs)

ROI Name∑
In
%
In
log
ratio
∑
Out
%
Out
LegNp(T2)7,28899.0%-7.972982.9%
VNC-unspecified480.7%-3.58411.4%
LTct110.1%-inf00.0%
MesoAN90.1%-3.1712.9%
IntTct40.1%-inf00.0%
MesoLN20.0%-1.0012.9%

Connectivity

Inputs

upstream
partner
#NTconns
MNml29
%
In
CV
IN19A0164GABA3068.7%0.1
IN16B0162Glu190.55.4%0.0
IN03A0476ACh161.54.6%0.1
IN08A02616Glu156.54.5%0.8
IN09A0022GABA1454.1%0.0
IN21A0122ACh119.53.4%0.0
IN19A0132GABA1173.3%0.0
IN19A0032GABA106.53.0%0.0
IN01A0152ACh100.52.9%0.0
IN03A0918ACh842.4%0.4
IN19A0222GABA762.2%0.0
SNpp4521ACh72.52.1%0.8
IN03A0324ACh712.0%0.4
IN08A0394Glu692.0%0.1
IN11A0482ACh692.0%0.0
IN21A0172ACh621.8%0.0
IN08A0327Glu59.51.7%0.4
IN18B0054ACh561.6%0.9
IN03A0102ACh521.5%0.0
IN03A0445ACh481.4%0.6
IN09A0102GABA461.3%0.0
IN01A0232ACh43.51.2%0.0
IN18B0082ACh421.2%0.0
IN03A0585ACh41.51.2%0.5
IN21A0032Glu411.2%0.0
IN01A0072ACh38.51.1%0.0
DNg502ACh351.0%0.0
IN19A0122ACh34.51.0%0.0
INXXX0326ACh341.0%0.7
IN06B0283GABA32.50.9%0.3
IN19A0092ACh320.9%0.0
IN03A0812ACh28.50.8%0.0
IN12B0232GABA28.50.8%0.0
DNg162ACh25.50.7%0.0
AN19B0142ACh23.50.7%0.0
IN21A0102ACh23.50.7%0.0
IN09A0042GABA21.50.6%0.0
IN08B0826ACh20.50.6%0.4
IN08B0584ACh200.6%0.7
INXXX0252ACh200.6%0.0
IN12B0401GABA180.5%0.0
IN02A0112Glu180.5%0.0
IN08B0762ACh180.5%0.0
INXXX0964ACh17.50.5%0.5
IN00A002 (M)1GABA14.50.4%0.0
IN20A.22A0913ACh14.50.4%0.1
IN12B0304GABA14.50.4%0.2
IN12B0454GABA14.50.4%0.4
IN03A0012ACh140.4%0.0
IN17A0413Glu140.4%0.4
IN12B0462GABA140.4%0.0
IN03A0753ACh130.4%0.5
IN07B0093Glu130.4%0.6
IN07B0013ACh12.50.4%0.4
IN03A0781ACh120.3%0.0
IN18B0113ACh120.3%0.2
IN04B0775ACh120.3%0.3
IN03A0336ACh11.50.3%0.5
IN21A0052ACh110.3%0.0
IN08B0452ACh110.3%0.0
IN12B0489GABA110.3%0.5
IN14B0032GABA110.3%0.0
SNppxx5ACh10.50.3%1.3
IN13B0972GABA10.50.3%0.0
IN20A.22A0892ACh100.3%0.0
IN04B0872ACh100.3%0.0
SNpp416ACh90.3%0.6
IN08B0292ACh90.3%0.0
IN08B0924ACh90.3%0.7
IN17A0012ACh8.50.2%0.0
IN03A0605ACh8.50.2%0.7
IN20A.22A0084ACh80.2%0.0
AN04A0013ACh7.50.2%0.1
IN12B044_e5GABA7.50.2%0.5
IN03A0902ACh7.50.2%0.0
IN16B0412Glu7.50.2%0.0
IN08B0012ACh7.50.2%0.0
IN08A0492Glu70.2%0.0
IN13A0072GABA70.2%0.0
IN08A0193Glu6.50.2%0.1
IN12B0182GABA6.50.2%0.0
IN03A0242ACh60.2%0.0
IN21A0182ACh60.2%0.0
IN12B0502GABA60.2%0.0
IN04B0715ACh5.50.2%0.6
IN20A.22A0413ACh5.50.2%0.0
SNxx302ACh50.1%0.4
IN19A0142ACh50.1%0.0
IN18B0384ACh50.1%0.5
IN08A0022Glu50.1%0.0
INXXX0584GABA50.1%0.2
IN08A026,IN08A0332Glu50.1%0.0
IN09A0122GABA50.1%0.0
IN12B0544GABA50.1%0.4
IN19B0102ACh4.50.1%0.0
IN13B0192GABA4.50.1%0.0
IN21A0022Glu4.50.1%0.0
SNpp442ACh40.1%0.2
INXXX0832ACh40.1%0.0
IN13B0932GABA40.1%0.0
IN08A0315Glu40.1%0.2
IN12B024_b2GABA40.1%0.0
IN04B0363ACh40.1%0.2
IN03A0714ACh40.1%0.3
IN12B044_d2GABA3.50.1%0.4
IN20A.22A0243ACh3.50.1%0.4
INXXX1072ACh3.50.1%0.0
DNge0372ACh3.50.1%0.0
IN12B037_a2GABA3.50.1%0.0
IN12B0911GABA30.1%0.0
IN21A0202ACh30.1%0.0
INXXX1223ACh30.1%0.4
IN13A0625GABA30.1%0.2
IN20A.22A0165ACh30.1%0.2
IN01A0121ACh2.50.1%0.0
INXXX0082unc2.50.1%0.2
IN08A0232Glu2.50.1%0.2
IN27X0022unc2.50.1%0.0
IN03A0432ACh2.50.1%0.0
IN20A.22A0042ACh2.50.1%0.0
INXXX4712GABA2.50.1%0.0
IN03B0282GABA2.50.1%0.0
IN12B044_c2GABA2.50.1%0.0
IN12B0142GABA2.50.1%0.0
IN07B0062ACh2.50.1%0.0
IN17A0072ACh2.50.1%0.0
IN06B0353GABA2.50.1%0.0
IN01A0351ACh20.1%0.0
DNg371ACh20.1%0.0
INXXX4682ACh20.1%0.5
INXXX0032GABA20.1%0.0
IN20A.22A0282ACh20.1%0.0
IN13B0982GABA20.1%0.0
IN04B0332ACh20.1%0.0
IN16B0292Glu20.1%0.0
IN09B0082Glu20.1%0.0
AN12B0082GABA20.1%0.0
IN20A.22A0093ACh20.1%0.2
IN03A0542ACh20.1%0.0
IN03A0302ACh20.1%0.0
IN12B0422GABA20.1%0.0
IN16B0182GABA20.1%0.0
IN01B0081GABA1.50.0%0.0
IN01A0381ACh1.50.0%0.0
AN09B0071ACh1.50.0%0.0
DNd021unc1.50.0%0.0
IN12B0591GABA1.50.0%0.0
IN20A.22A0051ACh1.50.0%0.0
IN00A001 (M)2unc1.50.0%0.3
IN12B0342GABA1.50.0%0.3
IN16B1132Glu1.50.0%0.0
IN12B0642GABA1.50.0%0.0
DNg692ACh1.50.0%0.0
IN19A0272ACh1.50.0%0.0
IN12B024_c2GABA1.50.0%0.0
IN04B0582ACh1.50.0%0.0
IN21A0422Glu1.50.0%0.0
IN03B0362GABA1.50.0%0.0
IN12B0112GABA1.50.0%0.0
IN18B0152ACh1.50.0%0.0
DNp072ACh1.50.0%0.0
IN21A0061Glu10.0%0.0
IN19B1091ACh10.0%0.0
IN04B1031ACh10.0%0.0
IN14A0231Glu10.0%0.0
IN13B0801GABA10.0%0.0
IN27X0041HA10.0%0.0
IN01A0111ACh10.0%0.0
DNp111ACh10.0%0.0
IN08A0221Glu10.0%0.0
INXXX3211ACh10.0%0.0
IN04B049_b1ACh10.0%0.0
IN18B0441ACh10.0%0.0
IN12B024_a1GABA10.0%0.0
IN21A0852Glu10.0%0.0
IN08B0722ACh10.0%0.0
IN16B0302Glu10.0%0.0
IN13A0522GABA10.0%0.0
IN20A.22A0392ACh10.0%0.0
IN19B0382ACh10.0%0.0
IN27X0032unc10.0%0.0
IN19A0482GABA10.0%0.0
Sternal posterior rotator MN2unc10.0%0.0
vMS172unc10.0%0.0
ANXXX0822ACh10.0%0.0
IN18B0471ACh0.50.0%0.0
Acc. tr flexor MN1unc0.50.0%0.0
IN01A0201ACh0.50.0%0.0
IN01A0021ACh0.50.0%0.0
IN14A0311Glu0.50.0%0.0
Tr extensor MN1unc0.50.0%0.0
ltm1-tibia MN1Glu0.50.0%0.0
IN21A0751Glu0.50.0%0.0
Tr flexor MN1Glu0.50.0%0.0
IN04B1041ACh0.50.0%0.0
IN04B0111ACh0.50.0%0.0
IN08A0411Glu0.50.0%0.0
IN19A0711GABA0.50.0%0.0
IN13A0451GABA0.50.0%0.0
IN20A.22A0551ACh0.50.0%0.0
IN16B0951Glu0.50.0%0.0
IN04B1081ACh0.50.0%0.0
IN20A.22A0451ACh0.50.0%0.0
IN13A0541GABA0.50.0%0.0
IN21A0371Glu0.50.0%0.0
IN13A0381GABA0.50.0%0.0
IN20A.22A0421ACh0.50.0%0.0
IN14B0121GABA0.50.0%0.0
vMS111Glu0.50.0%0.0
IN08B0651ACh0.50.0%0.0
IN12A0271ACh0.50.0%0.0
IN04B0741ACh0.50.0%0.0
IN21A0281Glu0.50.0%0.0
INXXX3411GABA0.50.0%0.0
IN04B0271ACh0.50.0%0.0
IN14A0121Glu0.50.0%0.0
IN12A0161ACh0.50.0%0.0
IN14A0131Glu0.50.0%0.0
IN21A0131Glu0.50.0%0.0
IN06B0701GABA0.50.0%0.0
IN20A.22A0031ACh0.50.0%0.0
IN17A0221ACh0.50.0%0.0
IN08B0561ACh0.50.0%0.0
IN21A0151Glu0.50.0%0.0
IN03B0351GABA0.50.0%0.0
IN16B0201Glu0.50.0%0.0
IN19B0121ACh0.50.0%0.0
INXXX0291ACh0.50.0%0.0
IN12A0031ACh0.50.0%0.0
IN03A0071ACh0.50.0%0.0
IN01A0341ACh0.50.0%0.0
IN13A0031GABA0.50.0%0.0
INXXX4641ACh0.50.0%0.0
AN27X0041HA0.50.0%0.0
AN14A0031Glu0.50.0%0.0
AN17A0141ACh0.50.0%0.0
DNg1051GABA0.50.0%0.0
DNge0481ACh0.50.0%0.0
DNge0591ACh0.50.0%0.0
IN19A0191ACh0.50.0%0.0
IN08B0621ACh0.50.0%0.0
IN21A0091Glu0.50.0%0.0
IN03A0191ACh0.50.0%0.0
IN19A0431GABA0.50.0%0.0
IN07B073_a1ACh0.50.0%0.0
IN13A0321GABA0.50.0%0.0
IN12B044_a1GABA0.50.0%0.0
IN04B0841ACh0.50.0%0.0
IN04B049_a1ACh0.50.0%0.0
IN18B045_a1ACh0.50.0%0.0
INXXX1611GABA0.50.0%0.0
IN21A0221ACh0.50.0%0.0
IN13B0061GABA0.50.0%0.0
IN14A0091Glu0.50.0%0.0
IN19A0241GABA0.50.0%0.0
IN21A0071Glu0.50.0%0.0
IN14A0081Glu0.50.0%0.0
IN06B0181GABA0.50.0%0.0
IN23B0011ACh0.50.0%0.0
AN04B0511ACh0.50.0%0.0
DNg931GABA0.50.0%0.0

Outputs

downstream
partner
#NTconns
MNml29
%
Out
CV
IN19A0132GABA1.59.1%0.0
IN21A0171ACh16.1%0.0
IN03B0421GABA16.1%0.0
IN19A0032GABA16.1%0.0
Acc. tr flexor MN1unc0.53.0%0.0
IN16B0161Glu0.53.0%0.0
MNml801Glu0.53.0%0.0
IN16B0731Glu0.53.0%0.0
IN13A0621GABA0.53.0%0.0
IN12B0231GABA0.53.0%0.0
IN19A0481GABA0.53.0%0.0
IN21A0111Glu0.53.0%0.0
IN06A0281GABA0.53.0%0.0
IN19A0081GABA0.53.0%0.0
IN19A0011GABA0.53.0%0.0
IN19A0021GABA0.53.0%0.0
IN09A0041GABA0.53.0%0.0
IN03A0321ACh0.53.0%0.0
IN03A0711ACh0.53.0%0.0
IN21A0771Glu0.53.0%0.0
IN03A0471ACh0.53.0%0.0
IN17A0411Glu0.53.0%0.0
IN16B0451Glu0.53.0%0.0
IN03A0131ACh0.53.0%0.0
INXXX4711GABA0.53.0%0.0
IN19B0111ACh0.53.0%0.0
IN13B0011GABA0.53.0%0.0
IN01A0341ACh0.53.0%0.0