Male CNS – Cell Type Explorer

LT84(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
5,120
Total Synapses
Post: 4,097 | Pre: 1,023
log ratio : -2.00
5,120
Mean Synapses
Post: 4,097 | Pre: 1,023
log ratio : -2.00
ACh(94.8% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
-
-
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
---------8-
-----------
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
---197402,0519093,719
---47298172346
AME
-
-
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
307
667

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LO(R)3,71990.8%-3.4334633.8%
SIP(R)1684.1%1.4445544.5%
AOTU(R)541.3%1.3513813.5%
Optic-unspecified(R)631.5%-2.66101.0%
ICL(R)130.3%1.69424.1%
PLP(R)491.2%-4.0330.3%
CentralBrain-unspecified210.5%-1.07101.0%
SMP(R)10.0%4.25191.9%
ME(R)80.2%-inf00.0%
EPA(R)10.0%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
LT84
%
In
CV
TmY4 (R)63ACh52313.1%0.7
TmY21 (R)73ACh48012.0%0.6
Tm5a (R)53ACh41710.4%0.8
Tm37 (R)55Glu2265.7%0.8
Tm5c (R)68Glu2035.1%0.7
Li14 (R)23Glu1804.5%0.7
Li34a (R)16GABA1142.9%0.9
Li22 (R)32GABA1142.9%0.7
TmY13 (R)30ACh1092.7%0.8
LT39 (R)1GABA1012.5%0.0
LC14a-2 (L)5ACh982.5%0.2
Li13 (R)12GABA822.1%1.0
Tm31 (R)13GABA792.0%0.5
Y3 (R)33ACh782.0%0.7
Tm20 (R)24ACh731.8%0.7
Tm16 (R)31ACh601.5%0.6
AOTU008 (R)10ACh561.4%0.7
TmY5a (R)38Glu541.4%0.4
TmY17 (R)21ACh431.1%0.8
LC13 (R)12ACh411.0%0.8
Tm32 (R)13Glu411.0%0.6
MeVP1 (R)13ACh350.9%0.7
Li20 (R)6Glu340.9%0.8
MeLo8 (R)8GABA290.7%0.7
LoVC19 (R)2ACh260.7%0.1
LC20b (R)10Glu260.7%0.5
LT43 (R)2GABA250.6%0.0
TmY10 (R)10ACh230.6%0.7
Tm26 (R)12ACh210.5%0.7
LC14b (L)7ACh200.5%0.7
LC37 (R)3Glu190.5%0.3
Tm5Y (R)13ACh190.5%0.4
AOTU008 (L)5ACh180.5%1.0
VES200m (R)6Glu180.5%0.7
LoVC18 (R)2DA150.4%0.1
LC10d (R)10ACh140.4%0.7
LoVC22 (L)2DA120.3%0.2
Li36 (R)1Glu100.3%0.0
Li30 (R)3GABA100.3%1.0
LoVP2 (R)4Glu100.3%0.8
MeLo3a (R)4ACh100.3%0.6
LoVP1 (R)7Glu100.3%0.5
Y13 (R)6Glu100.3%0.4
Tm24 (R)3ACh90.2%0.7
AVLP717m (R)1ACh80.2%0.0
P1_9a (R)2ACh80.2%0.5
Li16 (R)2Glu80.2%0.5
LOLP1 (R)5GABA80.2%0.8
Tm34 (R)5Glu80.2%0.5
Tm36 (R)4ACh80.2%0.4
Tm39 (R)5ACh80.2%0.5
LC10a (R)8ACh80.2%0.0
SMP339 (R)1ACh70.2%0.0
VES202m (R)2Glu70.2%0.1
TmY20 (R)4ACh70.2%0.5
Tm30 (R)5GABA70.2%0.6
Li32 (R)1GABA60.2%0.0
LC10e (R)4ACh60.2%0.6
Li19 (R)3GABA60.2%0.4
Tm4 (R)3ACh60.2%0.0
TmY9b (R)4ACh60.2%0.3
LC10c-1 (R)3ACh50.1%0.6
LT77 (R)2Glu50.1%0.2
aIPg2 (R)2ACh50.1%0.2
Li12 (R)2Glu50.1%0.2
LC10c-2 (R)4ACh50.1%0.3
MeLo13 (R)4Glu50.1%0.3
Tlp11 (R)3Glu50.1%0.3
Tm5b (R)1ACh40.1%0.0
LO_unclear (R)1Glu40.1%0.0
MeVC23 (R)1Glu40.1%0.0
AOTU042 (L)1GABA40.1%0.0
OA-ASM1 (R)2OA40.1%0.5
LC10b (R)2ACh40.1%0.5
LT63 (R)2ACh40.1%0.5
Li21 (R)3ACh40.1%0.4
AVLP749m (R)3ACh40.1%0.4
PAL03 (L)1unc30.1%0.0
AOTU100m (L)1ACh30.1%0.0
Li25 (R)1GABA30.1%0.0
OA-ASM1 (L)1OA30.1%0.0
Li33 (R)1ACh30.1%0.0
Li38 (L)1GABA30.1%0.0
Li39 (L)1GABA30.1%0.0
SMP039 (L)2unc30.1%0.3
LoVP13 (R)2Glu30.1%0.3
AOTU061 (R)2GABA30.1%0.3
LoVP14 (R)2ACh30.1%0.3
LT78 (R)2Glu30.1%0.3
OA-VUMa6 (M)2OA30.1%0.3
Tm29 (R)3Glu30.1%0.0
TmY9a (R)3ACh30.1%0.0
LC28 (R)3ACh30.1%0.0
Tlp12 (R)3Glu30.1%0.0
Y11 (R)3Glu30.1%0.0
LC25 (R)3Glu30.1%0.0
Tm38 (R)3ACh30.1%0.0
LT52 (R)3Glu30.1%0.0
SIP102m (R)1Glu20.1%0.0
OLVC4 (L)1unc20.1%0.0
LoVC25 (L)1ACh20.1%0.0
LC14a-1 (L)1ACh20.1%0.0
PVLP209m (R)1ACh20.1%0.0
SLP460 (R)1Glu20.1%0.0
MeLo1 (R)1ACh20.1%0.0
LT64 (R)1ACh20.1%0.0
AOTU011 (R)1Glu20.1%0.0
LC17 (R)1ACh20.1%0.0
PLP003 (R)1GABA20.1%0.0
LAL003 (R)1ACh20.1%0.0
PVLP207m (R)1ACh20.1%0.0
LoVP36 (R)1Glu20.1%0.0
LC14b (R)1ACh20.1%0.0
LT85 (R)1ACh20.1%0.0
AVLP428 (R)1Glu20.1%0.0
SIP017 (L)1Glu20.1%0.0
5-HTPMPV01 (L)15-HT20.1%0.0
LoVP47 (R)1Glu20.1%0.0
SIP117m (R)1Glu20.1%0.0
LT46 (L)1GABA20.1%0.0
TuTuA_1 (R)1Glu20.1%0.0
Li31 (R)1Glu20.1%0.0
mALD1 (L)1GABA20.1%0.0
LT36 (L)1GABA20.1%0.0
LoVCLo3 (R)1OA20.1%0.0
5-HTPMPV03 (R)15-HT20.1%0.0
LC20a (R)2ACh20.1%0.0
Tlp13 (R)2Glu20.1%0.0
MeLo2 (R)2ACh20.1%0.0
Li34b (R)2GABA20.1%0.0
LC9 (R)2ACh20.1%0.0
LC14a-2 (R)2ACh20.1%0.0
LPLC1 (R)2ACh20.1%0.0
LoVP92 (R)2ACh20.1%0.0
LPLC2 (R)2ACh20.1%0.0
LPLC4 (R)2ACh20.1%0.0
SMP394 (R)1ACh10.0%0.0
AOTU041 (R)1GABA10.0%0.0
SMP055 (R)1Glu10.0%0.0
P1_10a (R)1ACh10.0%0.0
SMP397 (R)1ACh10.0%0.0
SIP020_b (R)1Glu10.0%0.0
LAL011 (R)1ACh10.0%0.0
Li27 (R)1GABA10.0%0.0
LC10_unclear (R)1ACh10.0%0.0
Tm12 (R)1ACh10.0%0.0
Li18b (R)1GABA10.0%0.0
LC24 (R)1ACh10.0%0.0
LoVP5 (R)1ACh10.0%0.0
SMP039 (R)1unc10.0%0.0
Tm33 (R)1ACh10.0%0.0
Tm40 (R)1ACh10.0%0.0
MeTu4c (R)1ACh10.0%0.0
CB0976 (R)1Glu10.0%0.0
LoVP10 (R)1ACh10.0%0.0
PAL03 (R)1unc10.0%0.0
LC16 (R)1ACh10.0%0.0
Li23 (R)1ACh10.0%0.0
LC6 (R)1ACh10.0%0.0
LC15 (R)1ACh10.0%0.0
AOTU062 (R)1GABA10.0%0.0
LoVP83 (R)1ACh10.0%0.0
SMP398_b (R)1ACh10.0%0.0
LC41 (R)1ACh10.0%0.0
LC21 (R)1ACh10.0%0.0
Y12 (R)1Glu10.0%0.0
TmY16 (R)1Glu10.0%0.0
LH008m (R)1ACh10.0%0.0
LoVP74 (R)1ACh10.0%0.0
LC14a-1 (R)1ACh10.0%0.0
LT65 (R)1ACh10.0%0.0
PVLP202m (R)1ACh10.0%0.0
LAL027 (R)1ACh10.0%0.0
LHAD4a1 (R)1Glu10.0%0.0
LT47 (R)1ACh10.0%0.0
CL025 (R)1Glu10.0%0.0
LC19 (R)1ACh10.0%0.0
LoVP18 (R)1ACh10.0%0.0
PLP021 (R)1ACh10.0%0.0
LC23 (R)1ACh10.0%0.0
AOTU015 (R)1ACh10.0%0.0
aIPg4 (R)1ACh10.0%0.0
AVLP705m (R)1ACh10.0%0.0
SMP143 (L)1unc10.0%0.0
SIP017 (R)1Glu10.0%0.0
LT55 (L)1Glu10.0%0.0
CL258 (L)1ACh10.0%0.0
AVLP746m (R)1ACh10.0%0.0
LoVP40 (R)1Glu10.0%0.0
VES202m (L)1Glu10.0%0.0
SMP080 (R)1ACh10.0%0.0
MeVC24 (R)1Glu10.0%0.0
PVLP211m_c (R)1ACh10.0%0.0
AVLP714m (R)1ACh10.0%0.0
LoVCLo2 (R)1unc10.0%0.0
SIP106m (R)1DA10.0%0.0
LT86 (R)1ACh10.0%0.0
LT42 (R)1GABA10.0%0.0
CRE040 (R)1GABA10.0%0.0
LT58 (R)1Glu10.0%0.0
PVLP211m_a (R)1ACh10.0%0.0
LoVCLo3 (L)1OA10.0%0.0
OA-VUMa1 (M)1OA10.0%0.0
pIP1 (R)1ACh10.0%0.0

Outputs

downstream
partner
#NTconns
LT84
%
Out
CV
AOTU041 (R)2GABA47814.5%0.0
AOTU008 (R)12ACh3039.2%0.6
VES200m (R)6Glu2307.0%0.4
AOTU100m (R)1ACh2036.1%0.0
VES202m (R)3Glu1955.9%0.2
Tm37 (R)47Glu1324.0%0.6
Li14 (R)24Glu1213.7%0.7
pIP1 (R)1ACh952.9%0.0
AOTU017 (R)2ACh932.8%0.2
TmY5a (R)64Glu922.8%0.4
Li22 (R)38GABA902.7%0.9
LoVP90a (R)1ACh772.3%0.0
Y14 (R)19Glu672.0%0.7
SMP493 (R)1ACh631.9%0.0
AVLP714m (R)2ACh631.9%0.6
AOTU002_c (R)2ACh401.2%0.5
LT52 (R)4Glu321.0%1.2
LoVP92 (R)6ACh321.0%0.4
AOTU002_b (R)2ACh280.8%0.6
MeLo8 (R)8GABA280.8%0.4
LC10d (R)14ACh250.8%0.5
DNpe025 (R)1ACh230.7%0.0
LT51 (R)3Glu230.7%1.1
Li18b (R)8GABA210.6%1.0
Li30 (R)4GABA200.6%1.2
CL328 (R)2ACh190.6%0.4
LC36 (R)2ACh180.5%0.2
LC14a-1 (R)6ACh180.5%1.0
LC14b (R)8ACh180.5%0.8
AVLP717m (R)1ACh170.5%0.0
LT78 (R)3Glu160.5%0.2
Li39 (L)1GABA150.5%0.0
LT77 (R)3Glu150.5%1.0
TmY21 (R)13ACh150.5%0.3
VES202m (L)4Glu140.4%0.5
ICL013m_b (R)1Glu130.4%0.0
CL311 (R)1ACh130.4%0.0
AOTU016_b (R)1ACh120.4%0.0
PVLP211m_b (R)1ACh120.4%0.0
AOTU015 (R)2ACh120.4%0.8
PVLP203m (R)2ACh120.4%0.5
LT36 (L)1GABA110.3%0.0
AOTU061 (R)3GABA100.3%1.0
LC10c-1 (R)4ACh100.3%1.0
LT69 (R)1ACh90.3%0.0
PVLP217m (R)1ACh90.3%0.0
PVLP211m_c (R)1ACh90.3%0.0
LoVP14 (R)3ACh90.3%0.9
LC14a-2 (R)3ACh90.3%0.9
AVLP749m (R)4ACh90.3%0.7
TmY4 (R)7ACh90.3%0.4
LPLC4 (R)7ACh90.3%0.4
Tm40 (R)3ACh80.2%0.5
Tm30 (R)7GABA80.2%0.3
Li38 (L)1GABA70.2%0.0
MBON01 (R)1Glu70.2%0.0
LAL301m (R)2ACh70.2%0.7
SMP081 (R)2Glu70.2%0.1
LC10a (R)4ACh70.2%0.7
LoVP18 (R)3ACh70.2%0.5
LC10c-2 (R)5ACh70.2%0.6
Li21 (R)5ACh70.2%0.3
LoVP90b (R)1ACh60.2%0.0
LT58 (R)1Glu60.2%0.0
P1_1a (R)2ACh60.2%0.7
Li18a (R)4GABA60.2%0.3
DNpe002 (R)1ACh50.2%0.0
SMP052 (R)1ACh50.2%0.0
CRE038 (L)1Glu50.2%0.0
AOTU003 (R)1ACh50.2%0.0
SMP051 (R)1ACh50.2%0.0
SIP126m_a (R)1ACh50.2%0.0
LoVP100 (R)1ACh50.2%0.0
CRE037 (L)3Glu50.2%0.6
CB1544 (R)2GABA50.2%0.2
AOTU002_a (R)2ACh50.2%0.2
TmY10 (R)4ACh50.2%0.3
Tlp13 (R)4Glu50.2%0.3
AOTU060 (R)1GABA40.1%0.0
SMP158 (R)1ACh40.1%0.0
DNp46 (R)1ACh40.1%0.0
ICL002m (R)1ACh40.1%0.0
TuTuA_2 (R)1Glu40.1%0.0
AVLP709m (R)2ACh40.1%0.5
Tm26 (R)3ACh40.1%0.4
Li34b (R)2GABA40.1%0.0
PVLP210m (R)2ACh40.1%0.0
AOTU008 (L)1ACh30.1%0.0
LAL028 (R)1ACh30.1%0.0
aIPg6 (R)1ACh30.1%0.0
P1_2a/2b (R)1ACh30.1%0.0
OA-VUMa6 (M)1OA30.1%0.0
P1_10b (R)2ACh30.1%0.3
SIP135m (R)2ACh30.1%0.3
LoVP39 (R)2ACh30.1%0.3
PAM01 (R)3DA30.1%0.0
Tm16 (R)3ACh30.1%0.0
LOLP1 (R)3GABA30.1%0.0
Tm31 (R)3GABA30.1%0.0
TmY17 (R)3ACh30.1%0.0
MeLo13 (R)3Glu30.1%0.0
SIP102m (R)1Glu20.1%0.0
SMP048 (R)1ACh20.1%0.0
PAM05 (R)1DA20.1%0.0
LoVP26 (R)1ACh20.1%0.0
SMP339 (R)1ACh20.1%0.0
AVLP715m (R)1ACh20.1%0.0
SIP017 (R)1Glu20.1%0.0
LoVC22 (L)1DA20.1%0.0
PS002 (R)1GABA20.1%0.0
SIP137m_a (R)1ACh20.1%0.0
AOTU101m (R)1ACh20.1%0.0
LT86 (R)1ACh20.1%0.0
CL053 (R)1ACh20.1%0.0
PVLP211m_a (R)1ACh20.1%0.0
LT34 (R)1GABA20.1%0.0
LoVCLo3 (R)1OA20.1%0.0
AOTU019 (R)1GABA20.1%0.0
Tm39 (R)2ACh20.1%0.0
Tlp12 (R)2Glu20.1%0.0
LAL003 (R)2ACh20.1%0.0
LC6 (R)2ACh20.1%0.0
LC10b (R)2ACh20.1%0.0
Li34a (R)2GABA20.1%0.0
LoVP93 (R)2ACh20.1%0.0
Tm24 (R)2ACh20.1%0.0
LC13 (R)2ACh20.1%0.0
Li20 (R)2Glu20.1%0.0
TmY16 (R)2Glu20.1%0.0
AVLP718m (R)2ACh20.1%0.0
PVLP204m (R)2ACh20.1%0.0
AOTU024 (R)1ACh10.0%0.0
P1_13c (R)1ACh10.0%0.0
LoVC18 (R)1DA10.0%0.0
ICL013m_a (R)1Glu10.0%0.0
SMP054 (R)1GABA10.0%0.0
P1_10a (R)1ACh10.0%0.0
LAL130 (L)1ACh10.0%0.0
MBON35 (R)1ACh10.0%0.0
aIPg_m2 (R)1ACh10.0%0.0
P1_9a (R)1ACh10.0%0.0
SMP093 (R)1Glu10.0%0.0
SIP113m (R)1Glu10.0%0.0
SMP358 (R)1ACh10.0%0.0
Tm29 (R)1Glu10.0%0.0
TmY9a (R)1ACh10.0%0.0
LC27 (R)1ACh10.0%0.0
CB2981 (R)1ACh10.0%0.0
LC10_unclear (R)1ACh10.0%0.0
Tm5Y (R)1ACh10.0%0.0
MeTu4f (R)1ACh10.0%0.0
LoVP6 (R)1ACh10.0%0.0
LoVP13 (R)1Glu10.0%0.0
LC18 (R)1ACh10.0%0.0
LoVP2 (R)1Glu10.0%0.0
LC37 (R)1Glu10.0%0.0
SMP039 (R)1unc10.0%0.0
SIP020_c (R)1Glu10.0%0.0
SMP357 (R)1ACh10.0%0.0
LC46b (R)1ACh10.0%0.0
IB038 (R)1Glu10.0%0.0
MeVP1 (R)1ACh10.0%0.0
Li23 (R)1ACh10.0%0.0
MeTu3b (R)1ACh10.0%0.0
LC16 (R)1ACh10.0%0.0
LC43 (R)1ACh10.0%0.0
LC20b (R)1Glu10.0%0.0
AVLP089 (R)1Glu10.0%0.0
CL062_a2 (R)1ACh10.0%0.0
PLP086 (R)1GABA10.0%0.0
LC10e (R)1ACh10.0%0.0
LH006m (R)1ACh10.0%0.0
LC22 (R)1ACh10.0%0.0
LLPC2 (R)1ACh10.0%0.0
Li13 (R)1GABA10.0%0.0
LC15 (R)1ACh10.0%0.0
LC14a-2 (L)1ACh10.0%0.0
SLP384 (R)1Glu10.0%0.0
LC35a (R)1ACh10.0%0.0
LC14b (L)1ACh10.0%0.0
AOTU059 (R)1GABA10.0%0.0
SIP122m (R)1Glu10.0%0.0
aIPg7 (R)1ACh10.0%0.0
LC14a-1 (L)1ACh10.0%0.0
SIP024 (R)1ACh10.0%0.0
LoVP25 (R)1ACh10.0%0.0
PLP002 (R)1GABA10.0%0.0
LPLC1 (R)1ACh10.0%0.0
LH006m (L)1ACh10.0%0.0
SIP121m (R)1Glu10.0%0.0
aIPg5 (R)1ACh10.0%0.0
LT68 (R)1Glu10.0%0.0
LT54 (R)1Glu10.0%0.0
LC23 (R)1ACh10.0%0.0
AOTU026 (R)1ACh10.0%0.0
VES203m (R)1ACh10.0%0.0
LoVP50 (R)1ACh10.0%0.0
Li36 (R)1Glu10.0%0.0
SIP137m_b (R)1ACh10.0%0.0
LT63 (R)1ACh10.0%0.0
SLP304 (R)1unc10.0%0.0
aIPg1 (R)1ACh10.0%0.0
AVLP746m (R)1ACh10.0%0.0
LoVP35 (R)1ACh10.0%0.0
LoVP47 (R)1Glu10.0%0.0
LT67 (R)1ACh10.0%0.0
SIP126m_b (R)1ACh10.0%0.0
SIP110m_b (R)1ACh10.0%0.0
AOTU027 (R)1ACh10.0%0.0
SIP110m_a (R)1ACh10.0%0.0
SIP111m (R)1ACh10.0%0.0
AOTU023 (R)1ACh10.0%0.0
SIP133m (R)1Glu10.0%0.0
PLP019 (R)1GABA10.0%0.0
mALD3 (L)1GABA10.0%0.0
LoVP54 (R)1ACh10.0%0.0
LT42 (R)1GABA10.0%0.0
AOTU042 (L)1GABA10.0%0.0
AOTU016_c (R)1ACh10.0%0.0
AOTU041 (L)1GABA10.0%0.0
LT11 (R)1GABA10.0%0.0
LoVCLo3 (L)1OA10.0%0.0
AOTU012 (R)1ACh10.0%0.0
SMP108 (R)1ACh10.0%0.0