Male CNS – Cell Type Explorer

LNO1(R)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
6,406
Total Synapses
Post: 5,050 | Pre: 1,356
log ratio : -1.90
3,203
Mean Synapses
Post: 2,525 | Pre: 678
log ratio : -1.90
GABA(42.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
NO3,03960.2%-1.191,33398.3%
LAL(R)1,92838.2%-7.11141.0%
CRE(R)460.9%-2.7270.5%
CentralBrain-unspecified220.4%-3.4620.1%
AVLP(R)80.2%-inf00.0%
bL(R)50.1%-inf00.0%
PVLP(R)20.0%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
LNO1
%
In
CV
PFNv (L)10ACh652.526.4%0.3
LNO2 (R)1Glu364.514.7%0.0
LNO1 (R)2GABA208.58.4%0.1
LAL157 (L)1ACh147.56.0%0.0
PFNd (L)20ACh108.54.4%0.4
LAL052 (R)1Glu1014.1%0.0
LAL176 (L)1ACh47.51.9%0.0
LAL127 (R)2GABA38.51.6%0.2
LAL177 (L)1ACh381.5%0.0
LAL109 (R)2GABA37.51.5%0.3
FB4B (R)1Glu321.3%0.0
LAL034 (R)3ACh30.51.2%0.8
LAL051 (R)1Glu301.2%0.0
LAL122 (L)1Glu291.2%0.0
LAL050 (R)4GABA25.51.0%0.6
FB4C (R)1Glu210.8%0.0
FB1H (R)1DA19.50.8%0.0
LAL035 (R)2ACh18.50.7%0.7
LAL164 (L)1ACh180.7%0.0
CB3394 (R)1GABA17.50.7%0.0
FB4B (L)1Glu170.7%0.0
LAL144 (R)3ACh14.50.6%0.5
FB1H (L)1DA140.6%0.0
SIP064 (R)1ACh130.5%0.0
FB4C (L)1Glu130.5%0.0
LAL037 (R)2ACh120.5%0.3
LAL163 (L)1ACh11.50.5%0.0
FB4M (R)2DA10.50.4%0.1
LAL032 (R)1ACh100.4%0.0
LAL116 (L)1ACh100.4%0.0
OA-VUMa1 (M)2OA100.4%0.4
LAL304m (R)3ACh90.4%0.8
LAL030_a (R)1ACh8.50.3%0.0
PFNa (R)1ACh8.50.3%0.0
LAL123 (L)1unc80.3%0.0
CB2043 (R)1GABA7.50.3%0.0
LAL002 (R)1Glu7.50.3%0.0
LAL152 (L)1ACh7.50.3%0.0
FB4M (L)2DA7.50.3%0.5
ExR3 (R)15-HT70.3%0.0
SIP064 (L)1ACh70.3%0.0
CRE068 (R)2ACh70.3%0.6
FB3A (R)2Glu70.3%0.1
WED020_b (R)2ACh6.50.3%0.2
CB2117 (R)2ACh6.50.3%0.2
LAL147_c (R)1Glu6.50.3%0.0
LAL165 (L)1ACh60.2%0.0
LAL303m (R)1ACh60.2%0.0
PLP078 (L)1Glu60.2%0.0
LAL081 (R)1ACh5.50.2%0.0
CB1956 (R)2ACh5.50.2%0.5
ATL034 (R)1Glu5.50.2%0.0
PS118 (R)2Glu5.50.2%0.1
FB3A (L)2Glu5.50.2%0.1
LAL112 (R)2GABA5.50.2%0.1
WED096 (R)2Glu50.2%0.6
WEDPN7B (R)4ACh4.50.2%1.0
LAL128 (R)1DA40.2%0.0
LAL082 (R)1unc40.2%0.0
LAL207 (R)1GABA3.50.1%0.0
SIP004 (R)1ACh3.50.1%0.0
GNG499 (L)1ACh3.50.1%0.0
FB2A (L)2DA3.50.1%0.1
LAL145 (R)2ACh30.1%0.7
LAL110 (R)2ACh30.1%0.7
LAL162 (L)1ACh30.1%0.0
CB0079 (R)1GABA30.1%0.0
SIP087 (L)1unc30.1%0.0
OA-VPM3 (L)1OA30.1%0.0
CRE020 (R)1ACh30.1%0.0
PS233 (R)2ACh30.1%0.3
CL303 (R)1ACh2.50.1%0.0
VES109 (R)1GABA2.50.1%0.0
WED056 (R)1GABA2.50.1%0.0
LAL172 (L)1ACh2.50.1%0.0
LAL060_b (R)1GABA2.50.1%0.0
AVLP527 (R)1ACh2.50.1%0.0
LAL104 (L)1GABA2.50.1%0.0
LAL153 (L)1ACh2.50.1%0.0
ATL033 (R)1Glu2.50.1%0.0
AOTU006 (R)1ACh2.50.1%0.0
OA-VUMa4 (M)2OA2.50.1%0.2
LAL147_a (R)1Glu20.1%0.0
CB1477 (R)1ACh20.1%0.0
LAL010 (R)1ACh20.1%0.0
CB2846 (R)2ACh20.1%0.5
ExR6 (R)1Glu20.1%0.0
AVLP752m (R)2ACh20.1%0.0
LAL124 (L)1Glu1.50.1%0.0
SIP087 (R)1unc1.50.1%0.0
LAL161 (L)1ACh1.50.1%0.0
LAL176 (R)1ACh1.50.1%0.0
LAL156_b (L)1ACh1.50.1%0.0
PS327 (L)1ACh1.50.1%0.0
LAL117 (L)1ACh1.50.1%0.0
PLP301m (R)1ACh1.50.1%0.0
LAL137 (R)1ACh1.50.1%0.0
FB4F_b (L)1Glu1.50.1%0.0
FB2A (R)2DA1.50.1%0.3
LAL017 (R)1ACh1.50.1%0.0
WED157 (R)1ACh1.50.1%0.0
LAL100 (R)1GABA1.50.1%0.0
OA-VUMa8 (M)1OA1.50.1%0.0
WED057 (R)1GABA10.0%0.0
SMP145 (R)1unc10.0%0.0
LAL199 (R)1ACh10.0%0.0
CB2294 (R)1ACh10.0%0.0
LAL160 (L)1ACh10.0%0.0
PPL108 (L)1DA10.0%0.0
LAL203 (R)1ACh10.0%0.0
LCNOpm (R)1Glu10.0%0.0
LAL123 (R)1unc10.0%0.0
LAL198 (R)1ACh10.0%0.0
LAL024 (R)1ACh10.0%0.0
CB2523 (R)1ACh10.0%0.0
CB2713 (R)1ACh10.0%0.0
CB1355 (R)1ACh10.0%0.0
LAL143 (R)1GABA10.0%0.0
LAL139 (R)1GABA10.0%0.0
PPM1205 (R)1DA10.0%0.0
WED195 (L)1GABA10.0%0.0
OA-VUMa6 (M)1OA10.0%0.0
LAL133_a (R)1Glu10.0%0.0
LAL131 (R)1Glu10.0%0.0
LAL019 (R)2ACh10.0%0.0
WED153 (R)2ACh10.0%0.0
LAL175 (L)1ACh10.0%0.0
LAL158 (L)1ACh10.0%0.0
PFNa (L)1ACh0.50.0%0.0
LAL133_b (R)1Glu0.50.0%0.0
FB5F (R)1Glu0.50.0%0.0
FB1C (R)1DA0.50.0%0.0
SMP142 (R)1unc0.50.0%0.0
LAL196 (L)1ACh0.50.0%0.0
LAL116 (R)1ACh0.50.0%0.0
LAL208 (L)1Glu0.50.0%0.0
LAL043_c (R)1GABA0.50.0%0.0
SMP048 (L)1ACh0.50.0%0.0
IB047 (L)1ACh0.50.0%0.0
WED183 (R)1Glu0.50.0%0.0
LAL133_d (R)1Glu0.50.0%0.0
CB1914 (R)1ACh0.50.0%0.0
CB2066 (R)1GABA0.50.0%0.0
CL123_a (R)1ACh0.50.0%0.0
IB076 (L)1ACh0.50.0%0.0
AOTU001 (L)1ACh0.50.0%0.0
CB0194 (L)1GABA0.50.0%0.0
LAL171 (R)1ACh0.50.0%0.0
PLP170 (R)1Glu0.50.0%0.0
LAL185 (R)1ACh0.50.0%0.0
LAL129 (R)1ACh0.50.0%0.0
LHPV7c1 (R)1ACh0.50.0%0.0
LAL072 (R)1Glu0.50.0%0.0
LAL170 (L)1ACh0.50.0%0.0
LAL111 (R)1GABA0.50.0%0.0
CL303 (L)1ACh0.50.0%0.0
AN27X013 (L)1unc0.50.0%0.0
PS020 (R)1ACh0.50.0%0.0
PS197 (L)1ACh0.50.0%0.0
SMP272 (R)1ACh0.50.0%0.0
mALD4 (L)1GABA0.50.0%0.0
LPT21 (R)1ACh0.50.0%0.0
LAL194 (L)1ACh0.50.0%0.0
5-HTPMPV03 (L)15-HT0.50.0%0.0
OA-VPM3 (R)1OA0.50.0%0.0
WED038 (R)1Glu0.50.0%0.0
CB3204 (R)1ACh0.50.0%0.0
FB4F_a (R)1Glu0.50.0%0.0
CRE075 (R)1Glu0.50.0%0.0
AN07B037_a (L)1ACh0.50.0%0.0
MBON26 (L)1ACh0.50.0%0.0
CRE011 (R)1ACh0.50.0%0.0
LNOa (R)1Glu0.50.0%0.0
AVLP524_b (L)1ACh0.50.0%0.0
CRE024 (L)1ACh0.50.0%0.0
LAL043_a (R)1unc0.50.0%0.0
AVLP579 (L)1ACh0.50.0%0.0
CRE016 (R)1ACh0.50.0%0.0
PLP221 (L)1ACh0.50.0%0.0
LAL063 (R)1GABA0.50.0%0.0
WED144 (L)1ACh0.50.0%0.0
CB2620 (R)1GABA0.50.0%0.0
FB4P_b (R)1Glu0.50.0%0.0
WED155 (R)1ACh0.50.0%0.0
ER1_b (R)1GABA0.50.0%0.0
LAL043_e (R)1GABA0.50.0%0.0
LAL204 (R)1ACh0.50.0%0.0
SMP147 (L)1GABA0.50.0%0.0
IB017 (R)1ACh0.50.0%0.0
CRE060 (R)1ACh0.50.0%0.0
PS077 (R)1GABA0.50.0%0.0
ATL026 (R)1ACh0.50.0%0.0
GLNO (R)1unc0.50.0%0.0
ATL044 (R)1ACh0.50.0%0.0
IB049 (R)1ACh0.50.0%0.0
AVLP524_b (R)1ACh0.50.0%0.0
LAL192 (R)1ACh0.50.0%0.0
AVLP705m (R)1ACh0.50.0%0.0
PPM1202 (R)1DA0.50.0%0.0
SMP192 (L)1ACh0.50.0%0.0
PVLP201m_a (R)1ACh0.50.0%0.0
SMP184 (L)1ACh0.50.0%0.0
PS139 (R)1Glu0.50.0%0.0
LAL143 (L)1GABA0.50.0%0.0
LAL001 (R)1Glu0.50.0%0.0
LAL169 (R)1ACh0.50.0%0.0
LAL007 (R)1ACh0.50.0%0.0
VES010 (R)1GABA0.50.0%0.0
LAL170 (R)1ACh0.50.0%0.0
PPL108 (R)1DA0.50.0%0.0
LPT30 (R)1ACh0.50.0%0.0
PS057 (R)1Glu0.50.0%0.0
PPM1201 (R)1DA0.50.0%0.0
PVLP114 (R)1ACh0.50.0%0.0
DNa13 (R)1ACh0.50.0%0.0
PVLP076 (R)1ACh0.50.0%0.0
PS196_a (L)1ACh0.50.0%0.0
Nod4 (L)1ACh0.50.0%0.0
PVLP138 (L)1ACh0.50.0%0.0
AOTU019 (L)1GABA0.50.0%0.0

Outputs

downstream
partner
#NTconns
LNO1
%
Out
CV
PFNv (L)10ACh996.532.2%0.3
PFNd (L)20ACh727.523.5%0.2
LNO2 (R)1Glu431.513.9%0.0
LNO1 (R)2GABA208.56.7%0.1
FB4C (L)1Glu1755.7%0.0
FB4C (R)1Glu116.53.8%0.0
FB4B (L)1Glu104.53.4%0.0
FB3A (L)2Glu58.51.9%0.1
FB4B (R)1Glu37.51.2%0.0
FB2A (L)2DA331.1%0.1
FB1H (R)1DA301.0%0.0
FB2A (R)2DA29.51.0%0.1
FB3A (R)2Glu290.9%0.3
FB1H (L)1DA220.7%0.0
GLNO (R)2unc170.5%0.4
PFNa (R)1ACh110.4%0.0
FB4M (R)2DA90.3%0.3
OA-VPM3 (L)1OA80.3%0.0
FB1C (R)2DA80.3%0.9
FS3_c (R)1ACh70.2%0.0
FB4M (L)2DA6.50.2%0.2
ExR2 (R)1DA1.50.0%0.0
LNOa (R)1Glu1.50.0%0.0
FB4F_b (L)1Glu1.50.0%0.0
OA-VPM3 (R)1OA1.50.0%0.0
ExR8 (R)1ACh10.0%0.0
FB4Y (L)15-HT10.0%0.0
CRE024 (R)1ACh10.0%0.0
LHPV8a1 (R)1ACh10.0%0.0
LAL100 (R)1GABA10.0%0.0
MBON09 (R)2GABA10.0%0.0
CRE011 (R)1ACh10.0%0.0
CB4183 (R)2ACh10.0%0.0
LAL098 (R)1GABA0.50.0%0.0
LAL121 (R)1Glu0.50.0%0.0
LAL120_b (L)1Glu0.50.0%0.0
ExR4 (R)1Glu0.50.0%0.0
SMP157 (R)1ACh0.50.0%0.0
LAL145 (R)1ACh0.50.0%0.0
CB1355 (R)1ACh0.50.0%0.0
ER4d (R)1GABA0.50.0%0.0
LAL076 (R)1Glu0.50.0%0.0
LAL112 (R)1GABA0.50.0%0.0
LCNOpm (R)1Glu0.50.0%0.0
SMP163 (R)1GABA0.50.0%0.0
CRE107 (L)1Glu0.50.0%0.0
mALD4 (L)1GABA0.50.0%0.0
OA-VUMa1 (M)1OA0.50.0%0.0
LAL168 (R)1ACh0.50.0%0.0
MBON33 (R)1ACh0.50.0%0.0
SMP048 (L)1ACh0.50.0%0.0
SIP064 (R)1ACh0.50.0%0.0
CB2846 (R)1ACh0.50.0%0.0
FB4E_a (R)1Glu0.50.0%0.0
CRE086 (R)1ACh0.50.0%0.0
WED145 (L)1ACh0.50.0%0.0
CRE066 (R)1ACh0.50.0%0.0
LAL193 (R)1ACh0.50.0%0.0
LAL120_b (R)1Glu0.50.0%0.0
LAL111 (R)1GABA0.50.0%0.0
OA-VUMa6 (M)1OA0.50.0%0.0