Male CNS – Cell Type Explorer

LHAV5a2_a2(R)

8
Total Neurons
Right: 4 | Left: 4
log ratio : 0.00
1,960
Total Synapses
Post: 1,129 | Pre: 831
log ratio : -0.44
490
Mean Synapses
Post: 282.2 | Pre: 207.8
log ratio : -0.44
ACh(88.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LH(R)74766.2%-1.5425630.8%
SLP(R)31527.9%0.7552863.5%
CentralBrain-unspecified615.4%-0.38475.7%
Optic-unspecified(R)60.5%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
LHAV5a2_a2
%
In
CV
DM6_adPN (R)4ACh44.817.1%0.1
DM2_lPN (R)2ACh33.512.8%0.0
LHPD3a2_b (R)4Glu11.24.3%0.4
DM1_lPN (R)1ACh103.8%0.0
LHCENT6 (R)1GABA93.4%0.0
LHPV5d1 (R)4ACh8.53.3%0.6
LHAV5a2_a4 (R)3ACh72.7%0.8
LHCENT2 (R)1GABA51.9%0.0
LHPV2b4 (R)3GABA4.51.7%0.4
CB2892 (R)4ACh4.51.7%0.8
CB1759b (R)2ACh3.51.3%0.9
LHAV4a7 (R)2GABA3.51.3%0.3
LHAV4b4 (R)3GABA3.51.3%0.4
LHCENT8 (R)2GABA3.51.3%0.3
LHCENT10 (R)2GABA3.51.3%0.0
DC1_adPN (R)1ACh31.1%0.0
SLP176 (R)3Glu31.1%0.5
VA4_lPN (R)1ACh2.81.1%0.0
LHPV12a1 (R)1GABA2.81.1%0.0
LHAV7a1_a (R)2Glu2.81.1%0.1
M_vPNml79 (R)1GABA2.51.0%0.0
LHPV12a1 (L)1GABA2.51.0%0.0
LHAV3m1 (R)1GABA20.8%0.0
CB1570 (R)2ACh20.8%0.0
CB1089 (R)2ACh20.8%0.5
CB2979 (R)1ACh1.80.7%0.0
CB2589 (R)2GABA1.80.7%0.4
CB2797 (R)1ACh1.80.7%0.0
LHCENT1 (R)1GABA1.80.7%0.0
PPL201 (R)1DA1.80.7%0.0
CB2770 (R)3GABA1.80.7%0.8
SLP320 (R)2Glu1.80.7%0.4
CB4110 (R)3ACh1.80.7%0.4
LHPD3a4_b (R)2Glu1.50.6%0.7
LHPD3a4_c (R)3Glu1.50.6%0.7
LHAV5a2_a1 (R)2ACh1.50.6%0.3
LHAV4g7_a (R)2GABA1.50.6%0.0
LHPD4d1 (R)1Glu1.50.6%0.0
CB1286 (R)1Glu1.50.6%0.0
LHAV7a3 (R)4Glu1.50.6%0.3
SLP141 (R)2Glu1.20.5%0.2
CSD (L)15-HT1.20.5%0.0
LHAV4a1_b (R)3GABA1.20.5%0.6
LHPD2a1 (R)1ACh10.4%0.0
CSD (R)15-HT10.4%0.0
CB1483 (R)1GABA10.4%0.0
CB2851 (R)2GABA10.4%0.0
CB2292 (R)3unc10.4%0.4
LHCENT9 (R)1GABA10.4%0.0
CB2232 (R)1Glu0.80.3%0.0
CB1626 (R)1unc0.80.3%0.0
CB2812 (R)1GABA0.80.3%0.0
LHAV4a1_a (R)1GABA0.80.3%0.0
DM5_lPN (R)1ACh0.80.3%0.0
CB1154 (R)2Glu0.80.3%0.3
LHAV4e2_b1 (R)2GABA0.80.3%0.3
LHAV5a6_b (R)2ACh0.80.3%0.3
LHPD4a2 (R)2Glu0.80.3%0.3
SLP316 (R)1Glu0.80.3%0.0
LHPD4a1 (R)1Glu0.80.3%0.0
PPL203 (R)1unc0.80.3%0.0
LHAV4g6_a (R)2GABA0.80.3%0.3
LHPV4a10 (R)3Glu0.80.3%0.0
CB3023 (R)1ACh0.50.2%0.0
LHAV4g14 (R)1GABA0.50.2%0.0
SLP439 (R)1ACh0.50.2%0.0
CB1419 (R)1ACh0.50.2%0.0
CB1927 (R)1GABA0.50.2%0.0
DP1m_adPN (R)1ACh0.50.2%0.0
CB1413 (R)1ACh0.50.2%0.0
SMP076 (R)1GABA0.50.2%0.0
CB3733 (R)1GABA0.50.2%0.0
CB4120 (R)1Glu0.50.2%0.0
SLP319 (R)1Glu0.50.2%0.0
LHAV4g4_b (R)1unc0.50.2%0.0
LHAV4a2 (R)1GABA0.50.2%0.0
VM7v_adPN (R)1ACh0.50.2%0.0
M_vPNml86 (R)1GABA0.50.2%0.0
LHAV5a2_a2 (R)1ACh0.50.2%0.0
SLP241 (R)2ACh0.50.2%0.0
LHAV4g7_b (R)1GABA0.50.2%0.0
LHAD3f1_a (R)2ACh0.50.2%0.0
CB4086 (R)2ACh0.50.2%0.0
CB2755 (R)1GABA0.50.2%0.0
LHAV5b2 (R)1ACh0.50.2%0.0
OA-VUMa2 (M)2OA0.50.2%0.0
SMP049 (R)1GABA0.50.2%0.0
SLP038 (R)2ACh0.50.2%0.0
CB2782 (R)1Glu0.50.2%0.0
SLP224 (R)2ACh0.50.2%0.0
LHAV3b8 (R)2ACh0.50.2%0.0
M_vPNml53 (R)1GABA0.50.2%0.0
VM5d_adPN (R)2ACh0.50.2%0.0
LHPV4i4 (R)1Glu0.50.2%0.0
LHAV4a5 (R)2GABA0.50.2%0.0
LHAV6a3 (R)2ACh0.50.2%0.0
SLP142 (R)1Glu0.20.1%0.0
LHPD3a2_c (R)1Glu0.20.1%0.0
LHAV5a6_a (R)1ACh0.20.1%0.0
MB-C1 (R)1GABA0.20.1%0.0
CB1595 (R)1ACh0.20.1%0.0
CB2919 (R)1ACh0.20.1%0.0
CB2906 (R)1GABA0.20.1%0.0
LHPV5h2_a (R)1ACh0.20.1%0.0
CB1160 (R)1Glu0.20.1%0.0
CB1945 (R)1Glu0.20.1%0.0
CB1574 (L)1ACh0.20.1%0.0
SLP028 (R)1Glu0.20.1%0.0
M_vPNml87 (R)1GABA0.20.1%0.0
SLP405_b (R)1ACh0.20.1%0.0
LHAD1d1 (R)1ACh0.20.1%0.0
LHPV5a1 (R)1ACh0.20.1%0.0
LHPD3a5 (R)1Glu0.20.1%0.0
LHCENT12b (R)1Glu0.20.1%0.0
CB1179 (R)1Glu0.20.1%0.0
SLP104 (R)1Glu0.20.1%0.0
CB1923 (R)1ACh0.20.1%0.0
CB4085 (R)1ACh0.20.1%0.0
CB2004 (R)1GABA0.20.1%0.0
CB2831 (R)1GABA0.20.1%0.0
CB3221 (R)1Glu0.20.1%0.0
SLP149 (R)1ACh0.20.1%0.0
SLP258 (R)1Glu0.20.1%0.0
LHPD5c1 (R)1Glu0.20.1%0.0
CB2691 (R)1GABA0.20.1%0.0
LHAV4g17 (R)1GABA0.20.1%0.0
LHAV2n1 (R)1GABA0.20.1%0.0
LHPV5i1 (R)1ACh0.20.1%0.0
LHAV3k5 (R)1Glu0.20.1%0.0
LHPV6g1 (R)1Glu0.20.1%0.0
DM4_adPN (R)1ACh0.20.1%0.0
LHPD4d2_b (R)1Glu0.20.1%0.0
LHPD4e1_b (R)1Glu0.20.1%0.0
LHPV5b1 (R)1ACh0.20.1%0.0
CB1846 (R)1Glu0.20.1%0.0
CB1901 (R)1ACh0.20.1%0.0
LHAV6a1 (R)1ACh0.20.1%0.0
LHPV4d3 (R)1Glu0.20.1%0.0
LHAV3o1 (R)1ACh0.20.1%0.0
SMP532_b (R)1Glu0.20.1%0.0
SLP378 (R)1Glu0.20.1%0.0
LHAV3b12 (R)1ACh0.20.1%0.0
VA1v_adPN (R)1ACh0.20.1%0.0
M_vPNml88 (R)1GABA0.20.1%0.0
LHAV7a1_b (R)1Glu0.20.1%0.0
LHPV5c1 (R)1ACh0.20.1%0.0
M_vPNml78 (R)1GABA0.20.1%0.0
M_vPNml83 (R)1GABA0.20.1%0.0
CB1392 (R)1Glu0.20.1%0.0
CB2105 (R)1ACh0.20.1%0.0
CB1296_a (R)1GABA0.20.1%0.0
DM3_vPN (R)1GABA0.20.1%0.0
LHAV5a2_b (R)1ACh0.20.1%0.0
CB1850 (R)1Glu0.20.1%0.0
CB1219 (R)1Glu0.20.1%0.0
LHAV3b2_b (R)1ACh0.20.1%0.0
SLP313 (R)1Glu0.20.1%0.0
CB1726 (R)1Glu0.20.1%0.0
CB2904 (R)1Glu0.20.1%0.0
LHAV2g3 (R)1ACh0.20.1%0.0
CB3728 (R)1GABA0.20.1%0.0
CB3762 (R)1unc0.20.1%0.0
CB3016 (R)1GABA0.20.1%0.0
SLP001 (R)1Glu0.20.1%0.0
CB1114 (R)1ACh0.20.1%0.0
CB1275 (R)1unc0.20.1%0.0
LHPV4a11 (R)1Glu0.20.1%0.0
LHAV3k6 (R)1ACh0.20.1%0.0
CL362 (R)1ACh0.20.1%0.0
LHAV3j1 (R)1ACh0.20.1%0.0
SLP457 (R)1unc0.20.1%0.0
VM7d_adPN (R)1ACh0.20.1%0.0
VC1_lPN (R)1ACh0.20.1%0.0
VC2_lPN (R)1ACh0.20.1%0.0

Outputs

downstream
partner
#NTconns
LHAV5a2_a2
%
Out
CV
LHCENT6 (R)1GABA33.28.7%0.0
CB4110 (R)7ACh21.85.7%0.9
LHAV3b12 (R)1ACh18.24.8%0.0
CB1089 (R)2ACh14.23.7%0.2
CB2105 (R)2ACh13.23.5%0.2
LHPD4a2 (R)2Glu133.4%0.3
SLP470 (R)1ACh11.53.0%0.0
SLP327 (R)2ACh11.53.0%0.3
SLP320 (R)2Glu10.82.8%0.4
SLP141 (R)3Glu9.82.6%0.9
LHAV2n1 (R)1GABA92.4%0.0
CB3519 (R)2ACh7.21.9%0.2
SLP394 (R)1ACh61.6%0.0
SLP149 (R)1ACh5.81.5%0.0
LHCENT2 (R)1GABA51.3%0.0
LHPV5d1 (R)3ACh4.81.2%0.1
LHAV6a7 (R)3ACh4.81.2%0.4
LHAD1d1 (R)2ACh4.51.2%0.6
SLP439 (R)1ACh4.21.1%0.0
CB1352 (R)4Glu4.21.1%0.7
LHPV12a1 (R)1GABA4.21.1%0.0
LHPD4e1_b (R)2Glu41.1%0.6
LHPD2a1 (R)4ACh41.1%0.8
SLP028 (R)3Glu41.1%0.9
SMP335 (R)1Glu3.81.0%0.0
LHPD4d2_b (R)1Glu3.50.9%0.0
CB1073 (R)2ACh3.50.9%0.1
CB1628 (R)1ACh3.50.9%0.0
CB3357 (R)2ACh3.50.9%0.1
CB2467 (R)3ACh3.20.9%0.9
PPL201 (R)1DA30.8%0.0
LHAV3b13 (R)2ACh30.8%0.2
LHAD1b2 (R)2ACh2.50.7%0.6
PPL203 (R)1unc2.50.7%0.0
LHAV5a2_a4 (R)2ACh2.50.7%0.4
CB1181 (R)2ACh2.50.7%0.2
CB2592 (R)2ACh2.50.7%0.2
CB1333 (R)1ACh2.20.6%0.0
CB2934 (R)2ACh2.20.6%0.8
LHAV3b2_a (R)1ACh2.20.6%0.0
FB8F_a (R)2Glu20.5%0.5
SLP241 (R)2ACh20.5%0.8
CB2226 (R)2ACh20.5%0.8
CB2479 (R)2ACh1.80.5%0.4
SLP258 (R)1Glu1.80.5%0.0
SLP316 (R)1Glu1.80.5%0.0
SLP252_b (R)1Glu1.50.4%0.0
LHCENT1 (R)1GABA1.50.4%0.0
LHPD4c1 (R)1ACh1.50.4%0.0
LHAD1b2_b (R)1ACh1.50.4%0.0
CB1405 (R)1Glu1.50.4%0.0
CB1212 (R)1Glu1.50.4%0.0
SMP179 (R)1ACh1.50.4%0.0
LHAV6a5 (R)3ACh1.50.4%0.7
DM2_lPN (R)2ACh1.50.4%0.3
LHAV4g17 (R)1GABA1.20.3%0.0
5-HTPMPD01 (R)15-HT1.20.3%0.0
CB4123 (R)1Glu1.20.3%0.0
SLP319 (R)1Glu1.20.3%0.0
CB4087 (R)2ACh1.20.3%0.2
AVLP521 (R)1ACh1.20.3%0.0
CB1945 (R)2Glu1.20.3%0.6
LHAV7a3 (R)3Glu1.20.3%0.6
PAM10 (R)2DA1.20.3%0.6
CB4121 (R)4Glu1.20.3%0.3
CB3553 (R)1Glu10.3%0.0
CB2174 (L)1ACh10.3%0.0
CB3043 (R)2ACh10.3%0.5
CB2269 (R)2Glu10.3%0.5
SMP348 (R)1ACh10.3%0.0
CB4100 (R)1ACh10.3%0.0
CB3697 (R)1ACh10.3%0.0
SLP206 (R)1GABA10.3%0.0
CB4084 (R)2ACh10.3%0.5
LHAV3k1 (R)1ACh10.3%0.0
LHCENT12b (R)2Glu10.3%0.5
CB2232 (R)1Glu0.80.2%0.0
CB3016 (R)1GABA0.80.2%0.0
SMP106 (L)1Glu0.80.2%0.0
CB2196 (R)1Glu0.80.2%0.0
LHAV7a7 (R)1Glu0.80.2%0.0
LHAV2k13 (R)1ACh0.80.2%0.0
SLP405_a (R)2ACh0.80.2%0.3
LHAV7a1_a (R)2Glu0.80.2%0.3
CB1160 (R)2Glu0.80.2%0.3
SLP116 (R)1ACh0.80.2%0.0
CB3506 (R)2Glu0.80.2%0.3
SLP305 (R)1ACh0.80.2%0.0
CB2398 (R)2ACh0.80.2%0.3
LHPV5e2 (R)1ACh0.80.2%0.0
CB4128 (R)2unc0.80.2%0.3
SMP250 (R)1Glu0.80.2%0.0
LHAD1k1 (R)1ACh0.80.2%0.0
LHAV6a1 (R)2ACh0.80.2%0.3
DM6_adPN (R)2ACh0.80.2%0.3
SLP016 (R)1Glu0.80.2%0.0
LHCENT10 (R)2GABA0.80.2%0.3
CB2754 (R)1ACh0.50.1%0.0
SLP041 (R)1ACh0.50.1%0.0
CB4209 (R)1ACh0.50.1%0.0
CB2906 (R)1GABA0.50.1%0.0
LHAV6a8 (R)1Glu0.50.1%0.0
SLP298 (R)1Glu0.50.1%0.0
CB1655 (R)1ACh0.50.1%0.0
SLP040 (R)1ACh0.50.1%0.0
CB2958 (R)1unc0.50.1%0.0
CB0396 (R)1Glu0.50.1%0.0
SLP012 (R)1Glu0.50.1%0.0
SLP279 (R)1Glu0.50.1%0.0
SMP548 (R)1ACh0.50.1%0.0
CB3374 (R)1ACh0.50.1%0.0
CB1846 (R)1Glu0.50.1%0.0
SLP176 (R)1Glu0.50.1%0.0
CB3507 (R)1ACh0.50.1%0.0
SMP399_a (R)1ACh0.50.1%0.0
LHPV10b1 (R)1ACh0.50.1%0.0
LHPV1c1 (R)1ACh0.50.1%0.0
SLP104 (R)2Glu0.50.1%0.0
LHAV7a4 (R)2Glu0.50.1%0.0
CB1179 (R)1Glu0.50.1%0.0
CB2292 (R)2unc0.50.1%0.0
CB1923 (R)2ACh0.50.1%0.0
LHAV5a9_a (R)1ACh0.50.1%0.0
SLP229 (R)1ACh0.50.1%0.0
LHAV3o1 (R)2ACh0.50.1%0.0
CB2298 (R)2Glu0.50.1%0.0
LHAV5a2_a2 (R)2ACh0.50.1%0.0
CB2955 (R)1Glu0.50.1%0.0
LHPV4a8 (R)1Glu0.50.1%0.0
LHAV4g6_a (R)1GABA0.50.1%0.0
LHAV4g7_b (R)1GABA0.50.1%0.0
CB1201 (R)1ACh0.50.1%0.0
CB0947 (R)2ACh0.50.1%0.0
CB1081 (R)1GABA0.50.1%0.0
LHPV4a11 (R)1Glu0.50.1%0.0
LHAD3f1_a (R)1ACh0.50.1%0.0
LHAD3d4 (R)1ACh0.50.1%0.0
CB4141 (R)1ACh0.20.1%0.0
SLP033 (R)1ACh0.20.1%0.0
SMP350 (R)1ACh0.20.1%0.0
CB3498 (R)1ACh0.20.1%0.0
LHAV5a2_a1 (R)1ACh0.20.1%0.0
LHPD4b1 (R)1Glu0.20.1%0.0
SLP240_a (R)1ACh0.20.1%0.0
LHAV5a2_b (R)1ACh0.20.1%0.0
LHAV5a2_a3 (R)1ACh0.20.1%0.0
LHAD3b1_a (R)1ACh0.20.1%0.0
LHAV6a3 (R)1ACh0.20.1%0.0
SLP109 (R)1Glu0.20.1%0.0
LHPV4a10 (R)1Glu0.20.1%0.0
LHAD1a3 (R)1ACh0.20.1%0.0
SLP015_c (R)1Glu0.20.1%0.0
LHPV2b4 (R)1GABA0.20.1%0.0
CB3023 (R)1ACh0.20.1%0.0
LHAV4g14 (R)1GABA0.20.1%0.0
AVLP191 (R)1ACh0.20.1%0.0
SLP224 (R)1ACh0.20.1%0.0
LHAV3i1 (R)1ACh0.20.1%0.0
SLP473 (R)1ACh0.20.1%0.0
CL080 (R)1ACh0.20.1%0.0
SMP041 (R)1Glu0.20.1%0.0
DSKMP3 (R)1unc0.20.1%0.0
LHCENT9 (R)1GABA0.20.1%0.0
CB3539 (R)1Glu0.20.1%0.0
CB1020 (R)1ACh0.20.1%0.0
M_vPNml87 (R)1GABA0.20.1%0.0
SLP268 (R)1Glu0.20.1%0.0
LHPD3a4_c (R)1Glu0.20.1%0.0
LHAD1b5 (R)1ACh0.20.1%0.0
SLP024 (R)1Glu0.20.1%0.0
CB1663 (R)1ACh0.20.1%0.0
LHAD3a1 (R)1ACh0.20.1%0.0
SLP240_b (R)1ACh0.20.1%0.0
CB0996 (R)1ACh0.20.1%0.0
CB2679 (R)1ACh0.20.1%0.0
SLP405_b (R)1ACh0.20.1%0.0
LHAD1a2 (R)1ACh0.20.1%0.0
LHAV3e3_b (R)1ACh0.20.1%0.0
CB2596 (R)1ACh0.20.1%0.0
CB1104 (R)1ACh0.20.1%0.0
LHAV2h1 (R)1ACh0.20.1%0.0
SLP244 (R)1ACh0.20.1%0.0
SLP457 (R)1unc0.20.1%0.0
CSD (R)15-HT0.20.1%0.0
LHPV12a1 (L)1GABA0.20.1%0.0
CB4122 (R)1Glu0.20.1%0.0
CB2040 (R)1ACh0.20.1%0.0
CB2148 (R)1ACh0.20.1%0.0
CB2507 (R)1Glu0.20.1%0.0
CB2116 (R)1Glu0.20.1%0.0
SLP396 (R)1ACh0.20.1%0.0
CB2770 (R)1GABA0.20.1%0.0
CB2919 (R)1ACh0.20.1%0.0
CB4120 (R)1Glu0.20.1%0.0
CB1103 (R)1ACh0.20.1%0.0
SLP275 (R)1ACh0.20.1%0.0
CB1771 (R)1ACh0.20.1%0.0
LHPV5e1 (R)1ACh0.20.1%0.0
ANXXX434 (R)1ACh0.20.1%0.0
SLP391 (R)1ACh0.20.1%0.0
LHAD3f1_b (R)1ACh0.20.1%0.0
LHPV6d1 (R)1ACh0.20.1%0.0
CB2782 (R)1Glu0.20.1%0.0
LHPV5d3 (R)1ACh0.20.1%0.0
SLP022 (R)1Glu0.20.1%0.0
CB2743 (R)1ACh0.20.1%0.0
CB2880 (R)1GABA0.20.1%0.0
LHAD1i2_b (R)1ACh0.20.1%0.0
CB3288 (R)1Glu0.20.1%0.0
CB1726 (R)1Glu0.20.1%0.0
SLP017 (R)1Glu0.20.1%0.0
CB4086 (R)1ACh0.20.1%0.0
LHAV4b4 (R)1GABA0.20.1%0.0
CB1114 (R)1ACh0.20.1%0.0
LHAV5b2 (R)1ACh0.20.1%0.0
CB2107 (R)1GABA0.20.1%0.0
LHPV4i4 (R)1Glu0.20.1%0.0
LHCENT12a (R)1Glu0.20.1%0.0
LHPD4d1 (R)1Glu0.20.1%0.0
LHAV3k5 (R)1Glu0.20.1%0.0
SLP441 (R)1ACh0.20.1%0.0
LHCENT8 (R)1GABA0.20.1%0.0
VC2_lPN (R)1ACh0.20.1%0.0