Male CNS – Cell Type Explorer

LHAV3q1

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
5,259
Total Synapses
Right: 2,805 | Left: 2,454
log ratio : -0.19
2,629.5
Mean Synapses
Right: 2,805 | Left: 2,454
log ratio : -0.19
ACh(96.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
PLP1,25236.5%-0.9067336.8%
SCL52615.3%0.2361833.8%
LH42812.5%-0.0940121.9%
CA53315.5%-4.30271.5%
SLP47813.9%-2.56814.4%
CentralBrain-unspecified1875.5%-2.90251.4%
SMP270.8%-3.1730.2%

Connectivity

Inputs

upstream
partner
#NTconns
LHAV3q1
%
In
CV
VP1m+VP2_lvPN28ACh171.510.6%0.3
DN1a4Glu1529.4%0.0
aMe232Glu112.56.9%0.0
LHPV6k24Glu1116.8%0.4
VP1m+VP5_ilPN2ACh825.0%0.0
CL0632GABA815.0%0.0
VP3+_vPN2GABA764.7%0.0
VP2+_adPN2ACh563.4%0.0
LHPV4c1_c8Glu42.52.6%0.7
SLP1842ACh40.52.5%0.0
LHPV6o12ACh402.5%0.0
LHAV3p12Glu37.52.3%0.0
VP2_adPN1ACh332.0%0.0
VP2_l2PN2ACh32.52.0%0.0
WED09210ACh311.9%0.7
LHAV7a55Glu22.51.4%0.7
LHPV6k16Glu19.51.2%0.5
LHAV7a74Glu181.1%0.2
SLP4384unc17.51.1%0.3
SLP3146Glu17.51.1%0.7
LHPV4c1_b8Glu161.0%0.5
VP1m+VP2_lvPN12ACh150.9%0.0
CB19762Glu150.9%0.0
LHPV4h17Glu140.9%0.6
SLP3134Glu12.50.8%0.4
SLP4602Glu120.7%0.0
CB27333Glu120.7%0.3
SLP4574unc110.7%0.4
VP4_vPN2GABA10.50.6%0.0
M_lvPNm482ACh8.50.5%0.0
VM4_lvPN3ACh80.5%0.6
PLP064_b3ACh7.50.5%0.2
MeVP282ACh7.50.5%0.0
LHPV6c12ACh7.50.5%0.0
LHCENT83GABA70.4%0.0
CB27862Glu6.50.4%0.0
DC2_adPN2ACh60.4%0.7
M_vPNml602GABA60.4%0.0
CB23483ACh60.4%0.3
LHPV2a1_d4GABA5.50.3%0.3
VP1m+_lvPN4Glu5.50.3%0.3
SLP3652Glu50.3%0.0
CB22062ACh50.3%0.0
GNG5171ACh4.50.3%0.0
SLP3372Glu4.50.3%0.6
LHAV7a62Glu4.50.3%0.0
LHPV2a1_e2GABA40.2%0.0
LHAV3f12Glu40.2%0.0
LHPV4k11Glu3.50.2%0.0
PPL2032unc3.50.2%0.0
PPL2022DA3.50.2%0.0
CB1976b2Glu3.50.2%0.0
LHPV6f53ACh3.50.2%0.0
LHCENT21GABA30.2%0.0
CB30452Glu30.2%0.7
WEDPN2A2GABA30.2%0.3
LHPV2a1_a2GABA30.2%0.3
M_lPNm132ACh30.2%0.0
LHAV4i13GABA30.2%0.3
LHAV6c13Glu30.2%0.0
PPL2012DA30.2%0.0
PLP_TBD11Glu2.50.2%0.0
SLP2701ACh2.50.2%0.0
LPT1012ACh2.50.2%0.6
WED0932ACh2.50.2%0.2
DNp322unc2.50.2%0.0
M_l2PNm172ACh2.50.2%0.0
LHPV7a23ACh2.50.2%0.3
SLP0722Glu2.50.2%0.0
LHAV2d12ACh2.50.2%0.0
CB15331ACh20.1%0.0
M_adPNm31ACh20.1%0.0
LAL1831ACh20.1%0.0
CB42083ACh20.1%0.4
OA-VUMa2 (M)2OA20.1%0.0
LHPV6m12Glu20.1%0.0
M_l2PNm162ACh20.1%0.0
CB31403ACh20.1%0.2
LHPV2a1_c3GABA20.1%0.2
WED1682ACh20.1%0.0
LHPV4g23Glu20.1%0.0
LHAD1a23ACh20.1%0.0
CB28801GABA1.50.1%0.0
aMe221Glu1.50.1%0.0
MeVP321ACh1.50.1%0.0
MeVPMe41Glu1.50.1%0.0
CL1261Glu1.50.1%0.0
LHPD5a11Glu1.50.1%0.0
DA4m_adPN1ACh1.50.1%0.0
LHPV6f12ACh1.50.1%0.3
SLP3212ACh1.50.1%0.3
OA-VUMa6 (M)2OA1.50.1%0.3
CB30132unc1.50.1%0.3
LHPV6q11unc1.50.1%0.0
SMP1422unc1.50.1%0.0
PLP0102Glu1.50.1%0.0
LHPV6h12ACh1.50.1%0.0
WED0912ACh1.50.1%0.0
V_ilPN2ACh1.50.1%0.0
CB32042ACh1.50.1%0.0
SLP2092GABA1.50.1%0.0
SMP4272ACh1.50.1%0.0
M_smPN6t22GABA1.50.1%0.0
VP5+Z_adPN2ACh1.50.1%0.0
LHPV1c22ACh1.50.1%0.0
VP1m_l2PN2ACh1.50.1%0.0
CB28701ACh10.1%0.0
KCab-p1DA10.1%0.0
LHPV4a31Glu10.1%0.0
LHPV4c31Glu10.1%0.0
LHPV4c1_a1Glu10.1%0.0
WEDPN17_a11ACh10.1%0.0
CB14321GABA10.1%0.0
CB06561ACh10.1%0.0
SLP0691Glu10.1%0.0
LHAV2b2_d1ACh10.1%0.0
CSD15-HT10.1%0.0
SLP0031GABA10.1%0.0
SMP4251Glu10.1%0.0
PLP0031GABA10.1%0.0
SMP2361ACh10.1%0.0
LHAV3g11Glu10.1%0.0
CB15291ACh10.1%0.0
SMP4101ACh10.1%0.0
OLVp_unclear1ACh10.1%0.0
CB25611GABA10.1%0.0
LHPD2c11ACh10.1%0.0
LHPV6j11ACh10.1%0.0
CL3571unc10.1%0.0
CB23771ACh10.1%0.0
LHPD2a22ACh10.1%0.0
OA-VUMa3 (M)2OA10.1%0.0
M_imPNl922ACh10.1%0.0
PLP1552ACh10.1%0.0
SMP4212ACh10.1%0.0
M_lPNm11A2ACh10.1%0.0
PLP1192Glu10.1%0.0
PLP0232GABA10.1%0.0
LHPV4j22Glu10.1%0.0
SLP0702Glu10.1%0.0
CB05102Glu10.1%0.0
MeVC202Glu10.1%0.0
M_l2PNl212ACh10.1%0.0
M_l2PNm142ACh10.1%0.0
5-HTPMPV0125-HT10.1%0.0
MBON161ACh0.50.0%0.0
WED1941GABA0.50.0%0.0
LHAD1c21ACh0.50.0%0.0
SMP1451unc0.50.0%0.0
M_vPNml751GABA0.50.0%0.0
CB21481ACh0.50.0%0.0
LHPV5b21ACh0.50.0%0.0
KCa'b'-ap11DA0.50.0%0.0
CB39001ACh0.50.0%0.0
SLP0421ACh0.50.0%0.0
CB22901Glu0.50.0%0.0
LHPV4i11Glu0.50.0%0.0
WED1981GABA0.50.0%0.0
M_lPNm11B1ACh0.50.0%0.0
CB10561Glu0.50.0%0.0
CB42201ACh0.50.0%0.0
WED0891ACh0.50.0%0.0
LHAV3e4_a1ACh0.50.0%0.0
WEDPN8D1ACh0.50.0%0.0
LHAV2g2_b1ACh0.50.0%0.0
LHAV2g11ACh0.50.0%0.0
CB06501Glu0.50.0%0.0
CB25961ACh0.50.0%0.0
SLP122_b1ACh0.50.0%0.0
CL086_c1ACh0.50.0%0.0
WEDPN2B_b1GABA0.50.0%0.0
LHPD1b11Glu0.50.0%0.0
VP2+Z_lvPN1ACh0.50.0%0.0
PLP064_a1ACh0.50.0%0.0
LoVP381Glu0.50.0%0.0
WEDPN2B_a1GABA0.50.0%0.0
LHAV3d11Glu0.50.0%0.0
CB26911GABA0.50.0%0.0
LHPV6p11Glu0.50.0%0.0
CL0571ACh0.50.0%0.0
LoVP451Glu0.50.0%0.0
WEDPN111Glu0.50.0%0.0
VP3+VP1l_ivPN1ACh0.50.0%0.0
LHPV8a11ACh0.50.0%0.0
CL0271GABA0.50.0%0.0
WEDPN121Glu0.50.0%0.0
SLP0661Glu0.50.0%0.0
SLP2061GABA0.50.0%0.0
M_l2PNl221ACh0.50.0%0.0
V_l2PN1ACh0.50.0%0.0
DA1_lPN1ACh0.50.0%0.0
LoVCLo21unc0.50.0%0.0
MeVP291ACh0.50.0%0.0
VM3_adPN1ACh0.50.0%0.0
CB13261ACh0.50.0%0.0
aMe121ACh0.50.0%0.0
CB15041Glu0.50.0%0.0
CB21511GABA0.50.0%0.0
LHAV3b131ACh0.50.0%0.0
LHAD1f3_b1Glu0.50.0%0.0
M_l2PNm151ACh0.50.0%0.0
PLP0581ACh0.50.0%0.0
LHPV4b51Glu0.50.0%0.0
SLP2671Glu0.50.0%0.0
SLP3221ACh0.50.0%0.0
LHPV5m11ACh0.50.0%0.0
LHPV2i2_b1ACh0.50.0%0.0
LHAD1b2_d1ACh0.50.0%0.0
CB21851unc0.50.0%0.0
LHPV6h21ACh0.50.0%0.0
LHPV2a51GABA0.50.0%0.0
LHPV4c41Glu0.50.0%0.0
SLP3721ACh0.50.0%0.0
LHAV4g131GABA0.50.0%0.0
M_lvPNm471ACh0.50.0%0.0
SLP360_b1ACh0.50.0%0.0
SMP2351Glu0.50.0%0.0
PLP1161Glu0.50.0%0.0
PLP2471Glu0.50.0%0.0
VC5_lvPN1ACh0.50.0%0.0

Outputs

downstream
partner
#NTconns
LHAV3q1
%
Out
CV
LHAV4i14GABA1035.7%0.1
LHPV4c1_b8Glu92.55.1%0.3
LHPV6c12ACh794.4%0.0
LHPV1c22ACh72.54.0%0.0
LHPV6k24Glu703.9%0.0
SLP3148Glu452.5%0.5
LHAV2d12ACh442.4%0.0
SLP0367ACh43.52.4%0.5
CB42088ACh43.52.4%0.5
LHAD1a210ACh42.52.4%0.4
LHPV2a1_e3GABA382.1%0.1
LHPV6o12ACh34.51.9%0.0
SLP3594ACh28.51.6%0.2
LHPV6f18ACh25.51.4%1.0
SLP0722Glu25.51.4%0.0
LHAD1f3_b5Glu251.4%0.5
PLP0656ACh24.51.4%0.3
CB13004ACh23.51.3%0.4
PLP2472Glu231.3%0.0
M_smPN6t22GABA22.51.2%0.0
LHPV2a1_d4GABA21.51.2%0.4
LHCENT52GABA21.51.2%0.0
DN1a4Glu211.2%0.1
LHPV9b12Glu211.2%0.0
LHPV5j14ACh191.1%0.5
PLP0033GABA18.51.0%0.4
LHAD2d12Glu18.51.0%0.0
LHCENT32GABA18.51.0%0.0
SLP0353ACh181.0%0.2
LHAV8a12Glu181.0%0.0
LHAV3o16ACh170.9%0.3
PLP064_b6ACh170.9%0.6
SLP0802ACh16.50.9%0.0
LHPD5d13ACh160.9%0.0
SLP0562GABA14.50.8%0.0
PLP0582ACh140.8%0.0
FB1G2ACh140.8%0.0
LHAV7a75Glu13.50.7%0.7
LHAV2g2_b3ACh130.7%0.1
LHAV5a10_b2ACh130.7%0.0
PLP2172ACh12.50.7%0.0
PLP1232ACh12.50.7%0.0
LHPV4c1_a2Glu12.50.7%0.0
LHPV5g1_b5ACh120.7%0.4
SMP5482ACh110.6%0.0
LHAD2e12ACh110.6%0.0
CL2002ACh10.50.6%0.0
SLP2312ACh10.50.6%0.0
SLP2062GABA9.50.5%0.0
SMP2562ACh9.50.5%0.0
DNp322unc90.5%0.0
LHPV1c13ACh90.5%0.0
LHPD5a12Glu90.5%0.0
LHPD5f12Glu90.5%0.0
LHPV7a24ACh8.50.5%0.2
SLP2092GABA8.50.5%0.0
LHAV2g13ACh8.50.5%0.0
LHPV2a1_a4GABA8.50.5%0.4
LHAV2g2_a5ACh80.4%0.1
CB27862Glu7.50.4%0.0
SLP3125Glu7.50.4%0.5
LHPV4c1_c4Glu70.4%0.3
LHPV3b1_a3ACh70.4%0.3
LHPV5b24ACh6.50.4%0.7
SLP3212ACh60.3%0.2
LHPV4c33Glu60.3%0.4
SLP2552Glu60.3%0.0
ATL0412ACh60.3%0.0
LHPV4c43Glu60.3%0.5
LHAD1f3_a3Glu60.3%0.5
CL0993ACh5.50.3%0.1
LHPD4c12ACh5.50.3%0.0
LHAV2g35ACh5.50.3%0.6
CB30135unc5.50.3%0.7
LHAV3g24ACh5.50.3%0.1
PLP1441GABA50.3%0.0
LHPV5m14ACh50.3%0.4
LHAV3b133ACh50.3%0.0
LHPD2c24ACh50.3%0.3
CB34961ACh4.50.2%0.0
LHAV3k11ACh4.50.2%0.0
LHPV6i2_a2ACh4.50.2%0.0
CB1976b2Glu4.50.2%0.0
AVLP0381ACh40.2%0.0
PLP1291GABA40.2%0.0
VP1m+VP2_lvPN23ACh40.2%0.4
SLP4574unc40.2%0.3
CB42203ACh40.2%0.2
LH002m2ACh40.2%0.0
SLP2271ACh3.50.2%0.0
LHAV2g51ACh3.50.2%0.0
LHAV2p11ACh3.50.2%0.0
WEDPN42GABA3.50.2%0.0
PLP0673ACh3.50.2%0.4
CL0212ACh3.50.2%0.0
SLP4611ACh30.2%0.0
SLP1191ACh30.2%0.0
LHAD3e1_a1ACh30.2%0.0
M_lvPNm471ACh30.2%0.0
LHAV2k61ACh30.2%0.0
CB11492Glu30.2%0.0
CL0833ACh30.2%0.3
ATL0142Glu30.2%0.0
SLP3643Glu30.2%0.2
WEDPN111Glu2.50.1%0.0
PS1571GABA2.50.1%0.0
SLP3071ACh2.50.1%0.0
SMP5502ACh2.50.1%0.0
PLP0222GABA2.50.1%0.0
LHAV7a53Glu2.50.1%0.3
CB27333Glu2.50.1%0.0
SLP1202ACh2.50.1%0.0
LHAV2k132ACh2.50.1%0.0
SMP2352Glu2.50.1%0.0
CB19762Glu2.50.1%0.0
ATL0191ACh20.1%0.0
CL1011ACh20.1%0.0
AVLP0131unc20.1%0.0
WEDPN121Glu20.1%0.0
LHAD1f41Glu20.1%0.0
LHCENT41Glu20.1%0.0
LHPV2d12GABA20.1%0.5
LHAV3k22ACh20.1%0.0
LHMB12Glu20.1%0.0
LHPV12a12GABA20.1%0.0
LHPV2a32GABA20.1%0.0
LHPV4h11Glu1.50.1%0.0
LHPV6f3_b1ACh1.50.1%0.0
PLP0281unc1.50.1%0.0
CB22851ACh1.50.1%0.0
LHPD2d11Glu1.50.1%0.0
CB13262ACh1.50.1%0.0
LHPD3c12Glu1.50.1%0.0
FB2H_a2Glu1.50.1%0.0
LHAV6e12ACh1.50.1%0.0
LHPV8a12ACh1.50.1%0.0
WEDPN2B_a2GABA1.50.1%0.0
PPL2012DA1.50.1%0.0
CL3561ACh10.1%0.0
ATL0231Glu10.1%0.0
SLP2671Glu10.1%0.0
CB29221GABA10.1%0.0
CB30451Glu10.1%0.0
LHPV4g11Glu10.1%0.0
SMP2431ACh10.1%0.0
LHAD1f11Glu10.1%0.0
AVLP044_b1ACh10.1%0.0
SLP4731ACh10.1%0.0
LHPV6l21Glu10.1%0.0
LHPV4e11Glu10.1%0.0
LHAV2k81ACh10.1%0.0
CB05101Glu10.1%0.0
LHAD1f21Glu10.1%0.0
AVLP5711ACh10.1%0.0
LHPV6q11unc10.1%0.0
PLP0861GABA10.1%0.0
LHAV3g11Glu10.1%0.0
SMP5211ACh10.1%0.0
LHPV5b61ACh10.1%0.0
ATL0201ACh10.1%0.0
SLP3301ACh10.1%0.0
WEDPN7B1ACh10.1%0.0
SLP1181ACh10.1%0.0
LHPV3a3_b1ACh10.1%0.0
FB2I_b1Glu10.1%0.0
WEDPN31GABA10.1%0.0
SMP1921ACh10.1%0.0
LHPV10b11ACh10.1%0.0
V_ilPN1ACh10.1%0.0
CL1002ACh10.1%0.0
LHPV5b42ACh10.1%0.0
VP1m+_lvPN2Glu10.1%0.0
LHAV7a62Glu10.1%0.0
SMP415_b2ACh10.1%0.0
CB21512GABA10.1%0.0
CB06502Glu10.1%0.0
PLP064_a2ACh10.1%0.0
LHAV6b42ACh10.1%0.0
LHPD5c12Glu10.1%0.0
SLP2702ACh10.1%0.0
PPL2032unc10.1%0.0
SLP0572GABA10.1%0.0
SMP5271ACh0.50.0%0.0
SLP4431Glu0.50.0%0.0
SMP1451unc0.50.0%0.0
VP2+_adPN1ACh0.50.0%0.0
M_smPNm11GABA0.50.0%0.0
VP5+Z_adPN1ACh0.50.0%0.0
CL0071ACh0.50.0%0.0
SLP412_b1Glu0.50.0%0.0
SMP2141Glu0.50.0%0.0
SLP412_a1Glu0.50.0%0.0
M_lPNm131ACh0.50.0%0.0
SMP4261Glu0.50.0%0.0
CB01421GABA0.50.0%0.0
SIP0411Glu0.50.0%0.0
LHPV4b21Glu0.50.0%0.0
SLP2661Glu0.50.0%0.0
CB23481ACh0.50.0%0.0
SLP2881Glu0.50.0%0.0
SLP3371Glu0.50.0%0.0
LHPV4b31Glu0.50.0%0.0
SMP248_d1ACh0.50.0%0.0
SLP2861Glu0.50.0%0.0
CB31411Glu0.50.0%0.0
CB31851Glu0.50.0%0.0
SLP1601ACh0.50.0%0.0
SMP2391ACh0.50.0%0.0
LHAV2f2_b1GABA0.50.0%0.0
CB34791ACh0.50.0%0.0
SLP094_b1ACh0.50.0%0.0
CL015_b1Glu0.50.0%0.0
PVLP008_b1Glu0.50.0%0.0
LHAV3e21ACh0.50.0%0.0
LHPV6c21ACh0.50.0%0.0
KCg-s21DA0.50.0%0.0
PLP0661ACh0.50.0%0.0
PLP0231GABA0.50.0%0.0
CL3151Glu0.50.0%0.0
LHPV2a1_c1GABA0.50.0%0.0
CL1421Glu0.50.0%0.0
AVLP5961ACh0.50.0%0.0
SLP2241ACh0.50.0%0.0
LHPV4l11Glu0.50.0%0.0
SLP2151ACh0.50.0%0.0
WED0921ACh0.50.0%0.0
CL3621ACh0.50.0%0.0
LoVP451Glu0.50.0%0.0
VP2_l2PN1ACh0.50.0%0.0
SMP1851ACh0.50.0%0.0
VP1l+VP3_ilPN1ACh0.50.0%0.0
mALD31GABA0.50.0%0.0
OA-VUMa2 (M)1OA0.50.0%0.0
APL1GABA0.50.0%0.0
SLP4381unc0.50.0%0.0
ATL0431unc0.50.0%0.0
PLP1301ACh0.50.0%0.0
SLP0661Glu0.50.0%0.0
SMP5231ACh0.50.0%0.0
CB29371Glu0.50.0%0.0
CB40191ACh0.50.0%0.0
CB11711Glu0.50.0%0.0
SMP2071Glu0.50.0%0.0
LHAD1b2_d1ACh0.50.0%0.0
SLP2751ACh0.50.0%0.0
LHPV8c11ACh0.50.0%0.0
LHAV1a41ACh0.50.0%0.0
CB14671ACh0.50.0%0.0
LHPV4g21Glu0.50.0%0.0
SLP402_a1Glu0.50.0%0.0
SLP341_a1ACh0.50.0%0.0
PLP1561ACh0.50.0%0.0
PLP0951ACh0.50.0%0.0
WEDPN2A1GABA0.50.0%0.0
CL0571ACh0.50.0%0.0
SLP0741ACh0.50.0%0.0
WEDPN2B_b1GABA0.50.0%0.0
SMP1831ACh0.50.0%0.0
LHAV6g11Glu0.50.0%0.0
LHAV3h11ACh0.50.0%0.0
LHPV6m11Glu0.50.0%0.0
LHPV2h11ACh0.50.0%0.0
LHAV3p11Glu0.50.0%0.0
LHAV3f11Glu0.50.0%0.0
SLP2351ACh0.50.0%0.0